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IMGVR_UViG_3300035528_000047-3300035528-Ga0376490_000042_23542_23898
Arc-VirIMGVR_UViG_3300035528_000047-3300035528-Ga0376490_000042_23542_23898
Identity
- Kingdom:
- archaea
Quality
82.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 6-62
Domain cluster:
rep: OP341623.1__UYL93716.1__NIIg32_gp67__00067__D123-179
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18780.7 best | HNH_repeat | 39.9 | 6.20e-10 | 100.0% | 87.0% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3f2bA05 | 6.10.50.10 | Special › Helix non-globular › Insulin-like, subunit E › | 0.66 | 33.0 | 3.59e-01 | 98.2% | 58.3% |
| 4lyaA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 43.0 | 2.83e-01 | 84.2% | 30.6% |
| 3e3rB01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.57 | 46.0 | 4.20e-01 | 100.0% | 95.3% |
| 1gnlA01 | 1.20.1270.20 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.54 | 42.0 | 3.24e-01 | 87.7% | 39.6% |
| 6e5bN00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.54 | 44.0 | 3.06e-01 | 91.2% | 64.3% |
| 3mn2A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.53 | 42.0 | 3.59e-01 | 100.0% | 50.0% |
| 7n1nB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.52 | 35.0 | 3.44e-01 | 70.2% | 65.1% |
| 4i5jA02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.52 | 37.0 | 2.85e-01 | 80.7% | 73.9% |
| 4z7eA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.50 | 36.0 | 2.78e-01 | 82.5% | 79.5% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4938132 | 101.1.1.551 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HNH_repeat | 0.90 | 74.0 | 7.92e-01 | 98.2% | 100.0% |
| 4932170 | 101.1.1.551 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HNH_repeat | 0.86 | 64.0 | 6.72e-01 | 100.0% | 90.0% |
| 4009811 | 101.31.1.1 ↗ | alpha arrays › HTH › Bacteriophage Sf6 terminase small subunit › Bacteriophage Sf6 terminase small subunit › Sf6_terminase | 0.62 | 48.0 | 4.05e-01 | 100.0% | 47.6% |
| 4044019 | 108.1.1.171 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_8, CAPN13-like_C_EFh | 0.59 | 40.0 | 2.97e-01 | 70.2% | 44.0% |
| 2782 | 101.1.4.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › CUT | 0.55 | 37.0 | 3.04e-01 | 70.2% | 36.0% |
| 3594324 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 47.0 | 4.40e-01 | 100.0% | 91.4% |
| 4994602 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.52 | 34.0 | 3.38e-01 | 73.7% | 63.3% |
| 2088309 | 108.1.2.1 ↗ | alpha arrays › EF-hand › EF-hand-related › Type I dockerin domain › Dockerin_1 | 0.52 | 42.0 | 3.96e-01 | 100.0% | 74.7% |
| 4012079 | 149.1.1.0 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 | 0.51 | 41.0 | 2.47e-01 | 100.0% | 21.1% |