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IMGVR_UViG_3300035532_000146-3300035532-Ga0376494_001523_12406_12573
Arc-VirIMGVR_UViG_3300035532_000146-3300035532-Ga0376494_001523_12406_12573
Identity
- Kingdom:
- archaea
Quality
73.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-54
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tklB01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 52.0 | 4.94e-01 | 79.2% | 100.0% |
| 3fxdC00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.69 | 53.0 | 5.43e-01 | 100.0% | 90.0% |
| 6he1B01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.67 | 47.0 | 4.48e-01 | 98.1% | 62.5% |
| 3eleA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.62 | 53.0 | 3.44e-01 | 92.5% | 52.6% |
| 3t46A00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.61 | 48.0 | 4.31e-01 | 98.1% | 61.3% |
| 4g09A03 | 1.20.5.1300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.58 | 41.0 | 4.08e-01 | 75.5% | 72.7% |
| 1tfeA02 | 1.10.286.20 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › | 0.58 | 39.0 | 4.20e-01 | 77.4% | 84.4% |
| 3fgyA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 43.0 | 3.14e-01 | 79.2% | 83.0% |
| 3n4eA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.57 | 45.0 | 3.83e-01 | 98.1% | 100.0% |
| 2pjqA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.57 | 45.0 | 3.86e-01 | 88.7% | 52.8% |
| 6s2wA01 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.50 | 41.0 | 3.56e-01 | 90.6% | 86.6% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3743904 | 375.10.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE | 0.74 | 48.0 | 4.68e-01 | 79.2% | 60.0% |
| 3967220 | 632.11.1.13 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › PF27144 | 0.68 | 50.0 | 4.78e-01 | 96.2% | 67.2% |
| 4418131 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.68 | 52.0 | 5.37e-01 | 83.0% | 100.0% |
| 4319920 | 7524.1.1.2 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Histidinol_dh | 0.67 | 46.0 | 2.69e-01 | 71.7% | 9.0% |
| 3227443 | 375.10.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE | 0.67 | 51.0 | 4.77e-01 | 81.1% | 100.0% |
| 3924201 | 375.10.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE | 0.67 | 48.0 | 4.51e-01 | 75.5% | 100.0% |
| 3819271 | 375.10.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE | 0.67 | 47.0 | 4.47e-01 | 75.5% | 100.0% |
| 5023828 | 159.1.1.1 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › MazG | 0.66 | 51.0 | 4.49e-01 | 90.6% | 59.1% |
| 3393166 | 375.10.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE | 0.66 | 52.0 | 4.81e-01 | 83.0% | 100.0% |
| 4283998 | 375.10.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DPOE | 0.66 | 47.0 | 4.51e-01 | 75.5% | 100.0% |
| 4257658 | 7524.1.1.2 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Histidinol_dh | 0.64 | 44.0 | 3.06e-01 | 73.6% | 20.0% |
| 4324425 | 7524.1.1.2 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Histidinol_dh | 0.61 | 46.0 | 2.75e-01 | 83.0% | 70.4% |
| 4100663 | 7575.1.1.11 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › PF31181 | 0.60 | 48.0 | 3.01e-01 | 94.3% | 33.9% |