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IMGVR_UViG_3300035533_000026-3300035533-Ga0376495_001117_1_363
Arc-VirIMGVR_UViG_3300035533_000026-3300035533-Ga0376495_001117_1_363
Identity
- Kingdom:
- archaea
Quality
78.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-56
Domain cluster:
representative
CATH (55)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6r1nA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.89 | 82.0 | 6.45e-01 | 96.4% | 68.0% |
| 1vx7301 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.89 | 83.0 | 7.45e-01 | 100.0% | 90.5% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.89 | 79.0 | 6.97e-01 | 94.6% | 74.0% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.88 | 76.0 | 5.94e-01 | 92.9% | 59.1% |
| 5ffdA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.87 | 78.0 | 5.69e-01 | 96.4% | 86.9% |
| 4fxdA04 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.87 | 80.0 | 5.63e-01 | 98.2% | 86.9% |
| 4djgB00 | 1.20.5.440 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain | 0.86 | 64.0 | 6.93e-01 | 78.6% | 100.0% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.86 | 75.0 | 6.06e-01 | 94.6% | 59.8% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.86 | 76.0 | 5.90e-01 | 94.6% | 54.5% |
| 2gv9A05 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.85 | 72.0 | 7.05e-01 | 89.3% | 84.7% |
| 7odyC01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.85 | 69.0 | 5.76e-01 | 87.5% | 56.5% |
| 4q20A01 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.85 | 74.0 | 6.43e-01 | 94.6% | 72.0% |
| 1kfdA02 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.85 | 72.0 | 6.56e-01 | 91.1% | 76.1% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.85 | 74.0 | 7.05e-01 | 94.6% | 90.6% |
| 1iygA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.84 | 64.0 | 4.70e-01 | 80.4% | 59.4% |
| 1wpbG01 | 1.10.287.680 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.84 | 62.0 | 6.31e-01 | 76.8% | 79.6% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.84 | 74.0 | 6.80e-01 | 96.4% | 94.4% |
| 8d7hD01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.83 | 74.0 | 5.11e-01 | 98.2% | 63.6% |
| 2lf0A01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.81 | 66.0 | 6.45e-01 | 87.5% | 88.3% |
| 6f1eA01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.81 | 66.0 | 4.82e-01 | 87.5% | 40.3% |
| 5b1oA00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.80 | 61.0 | 5.86e-01 | 85.7% | 70.8% |
| 1b5lA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.80 | 67.0 | 4.80e-01 | 91.1% | 59.9% |
| 3qc1A01 | 1.25.40.540 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TAP42-like family | 0.79 | 68.0 | 4.90e-01 | 94.6% | 36.4% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.79 | 64.0 | 5.61e-01 | 91.1% | 69.4% |
| 2mmbA00 | 4.10.640.20 | Few Secondary Structures › Irregular › 30s Ribosomal Protein S18 › | 0.78 | 59.0 | 4.78e-01 | 82.1% | 65.4% |
| 6tkvA01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.78 | 64.0 | 6.01e-01 | 91.1% | 76.5% |
| 2x2vA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.77 | 61.0 | 5.79e-01 | 89.3% | 85.3% |
| 4errB00 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 62.0 | 5.39e-01 | 87.5% | 62.7% |
| 2i0mA01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.77 | 67.0 | 5.46e-01 | 100.0% | 80.2% |
| 3vwaA03 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.76 | 65.0 | 4.05e-01 | 98.2% | 17.8% |
| 4djhA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.76 | 63.0 | 4.02e-01 | 94.6% | 53.3% |
| 6ljaA01 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.76 | 64.0 | 3.84e-01 | 92.9% | 21.1% |
| 3tulB00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.76 | 65.0 | 4.94e-01 | 96.4% | 43.6% |
| 3c5iA02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.76 | 65.0 | 4.13e-01 | 96.4% | 36.4% |
| 3nrxA00 | 1.20.58.1520 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 62.0 | 4.85e-01 | 96.4% | 47.2% |
| 2jqqA00 | 1.20.58.1240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 62.0 | 4.59e-01 | 100.0% | 42.2% |
| 1s35A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 62.0 | 5.21e-01 | 100.0% | 88.1% |
| 2iw3A02 | 1.20.1390.20 | Mainly Alpha › Up-down Bundle › PWI domain › | 0.71 | 50.0 | 4.19e-01 | 73.2% | 45.6% |
| 2yxyA01 | 1.10.287.880 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Hypothetical protein YfhH domain | 0.71 | 58.0 | 6.14e-01 | 87.5% | 98.0% |
| 2b5dX01 | 3.20.110.10 | Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain | 0.71 | 58.0 | 3.42e-01 | 89.3% | 24.8% |
| 1ku9A02 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.71 | 58.0 | 5.67e-01 | 96.4% | 87.5% |
| 4m70B00 | 1.10.246.200 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain | 0.70 | 51.0 | 4.28e-01 | 76.8% | 52.7% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 52.0 | 5.11e-01 | 83.9% | 76.2% |
| 2kw6A00 | 6.10.140.1300 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 57.0 | 5.48e-01 | 96.4% | 87.7% |
| 3fxdC00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.68 | 50.0 | 5.19e-01 | 82.1% | 96.0% |
| 2ckoA02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.67 | 59.0 | 3.80e-01 | 100.0% | 56.0% |
| 3l1nA01 | 6.10.140.790 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 49.0 | 5.05e-01 | 82.1% | 90.2% |
| 2kg7B00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.66 | 55.0 | 4.56e-01 | 91.1% | 53.6% |
| 3v5uA01 | 6.10.280.80 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › NCX, peripheral helical region | 0.66 | 53.0 | 4.95e-01 | 96.4% | 92.1% |
| 2b3tB01 | 6.10.140.1980 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 52.0 | 5.05e-01 | 91.1% | 83.1% |
| 7ckaA01 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.64 | 54.0 | 3.77e-01 | 98.2% | 61.9% |
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.63 | 50.0 | 4.32e-01 | 92.9% | 56.3% |
| 2vdwG00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 43.0 | 2.84e-01 | 89.3% | 89.9% |
| 1tfeA02 | 1.10.286.20 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › | 0.54 | 38.0 | 4.19e-01 | 75.0% | 93.3% |
| 3l4aA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.53 | 39.0 | 3.19e-01 | 83.9% | 52.9% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3218879 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.95 | 83.0 | 8.05e-01 | 91.1% | 88.3% |
| 4941665 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.94 | 78.0 | 7.20e-01 | 87.5% | 73.9% |
| 4236831 | 604.6.1.50 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › DUF2524 | 0.93 | 78.0 | 6.74e-01 | 87.5% | 83.7% |
| 3796578 | 192.4.1.13 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Cactin_mid | 0.93 | 84.0 | 5.55e-01 | 100.0% | 27.7% |
| 3336158 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.93 | 79.0 | 5.56e-01 | 92.9% | 33.8% |
| 5044551 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.92 | 75.0 | 7.08e-01 | 85.7% | 73.8% |
| 3595146 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.91 | 70.0 | 7.69e-01 | 80.4% | 100.0% |
| 4965021 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.91 | 75.0 | 7.63e-01 | 87.5% | 92.7% |
| 4952010 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.91 | 80.0 | 7.18e-01 | 94.6% | 73.3% |
| 3409326 | 3930.1.1.6 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › Dicer_PBD | 0.91 | 85.0 | 6.19e-01 | 100.0% | 82.2% |
| 3930829 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.89 | 79.0 | 7.06e-01 | 94.6% | 77.3% |
| 3580289 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.89 | 75.0 | 5.66e-01 | 91.1% | 70.4% |
| 4943532 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.88 | 77.0 | 7.11e-01 | 94.6% | 81.4% |
| 5056100 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.88 | 80.0 | 7.11e-01 | 96.4% | 77.3% |
| 4267024 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.88 | 78.0 | 6.94e-01 | 94.6% | 76.0% |
| 3934523 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.88 | 81.0 | 6.67e-01 | 100.0% | 84.2% |
| 4937522 | 3930.1.1.3 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RNA_helicase_helical | 0.87 | 81.0 | 6.07e-01 | 100.0% | 86.4% |
| 3482751 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.87 | 73.0 | 6.93e-01 | 91.1% | 80.0% |
| 4961508 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.87 | 76.0 | 6.81e-01 | 94.6% | 76.0% |
| 3469530 | 3274.1.1.1 ↗ | extended segments › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › Ribosomal_S5 | 0.87 | 77.0 | 5.56e-01 | 94.6% | 79.3% |
| 3608485 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.86 | 77.0 | 5.88e-01 | 94.6% | 49.6% |
| 3730806 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.85 | 76.0 | 5.71e-01 | 96.4% | 61.6% |
| 4966215 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 73.0 | 5.14e-01 | 94.6% | 34.5% |
| 3632463 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.84 | 75.0 | 5.70e-01 | 96.4% | 65.0% |
| 144750 | 150.3.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › IL6 | 0.84 | 74.0 | 5.03e-01 | 96.4% | 58.2% |
| 5070891 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.83 | 73.0 | 6.45e-01 | 96.4% | 77.5% |
| 4056724 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.83 | 62.0 | 6.69e-01 | 80.4% | 100.0% |
| 4270097 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.83 | 69.0 | 5.49e-01 | 89.3% | 47.6% |
| 3900923 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.83 | 73.0 | 6.04e-01 | 100.0% | 89.0% |
| 5055329 | 3004.1.1.0 ↗ | alpha bundles › Hypothetical protein YfhH, N-terminal domain › Hypothetical protein YfhH, N-terminal domain › Hypothetical protein YfhH, N-terminal domain | 0.83 | 73.0 | 6.59e-01 | 96.4% | 86.7% |
| 3285819 | 101.1.2.92 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_11 | 0.82 | 60.0 | 4.52e-01 | 85.7% | 33.8% |
| 4461237 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.81 | 70.0 | 3.97e-01 | 92.9% | 27.8% |
| 3229018 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.80 | 73.0 | 5.41e-01 | 100.0% | 85.9% |
| 5059236 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.80 | 69.0 | 5.89e-01 | 96.4% | 62.2% |
| 3281203 | 604.17.1.0 ↗ | alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like | 0.79 | 59.0 | 6.18e-01 | 78.6% | 92.0% |
| 3180530 | 3711.1.1.0 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein | 0.79 | 67.0 | 5.35e-01 | 94.6% | 49.1% |
| 4980470 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.79 | 66.0 | 5.53e-01 | 92.9% | 56.8% |
| 3735658 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.78 | 64.0 | 5.06e-01 | 91.1% | 45.2% |
| 3540685 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.75 | 66.0 | 4.25e-01 | 100.0% | 51.9% |
| 4539383 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.74 | 54.0 | 5.82e-01 | 80.4% | 100.0% |
| 4029883 | 5060.1.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › V-type ATP synthase subunit C › V-type ATP synthase subunit C › vATP-synt_AC39 | 0.72 | 60.0 | 4.70e-01 | 92.9% | 43.3% |
| 4928066 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.70 | 59.0 | 4.12e-01 | 92.9% | 29.8% |
| 4655609 | 5060.1.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › V-type ATP synthase subunit C › V-type ATP synthase subunit C › vATP-synt_AC39 | 0.69 | 61.0 | 4.42e-01 | 100.0% | 80.6% |
| 5007254 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.67 | 63.0 | 3.79e-01 | 100.0% | 73.6% |
| 3998654 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.57 | 42.0 | 3.03e-01 | 80.4% | 92.9% |
D2
medium
residues 57-120
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hteA03 | 1.10.167.30 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › | 0.63 | 45.0 | 4.16e-01 | 81.2% | 58.7% |
| 4gltA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.62 | 53.0 | 4.46e-01 | 98.4% | 81.6% |
| 8fbnB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.60 | 52.0 | 3.66e-01 | 100.0% | 52.3% |
| 2ho1B00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 42.0 | 3.05e-01 | 100.0% | 26.2% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 224060 | 3631.1.1.0 ↗ | 0.66 | 45.0 | 4.18e-01 | 76.6% | 55.7% | |
| 5057512 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.64 | 52.0 | 5.26e-01 | 93.8% | 89.2% |
| 3491664 | 601.33.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain | 0.61 | 51.0 | 4.89e-01 | 93.8% | 84.0% |
| 3576492 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 47.0 | 4.29e-01 | 87.5% | 78.9% |
| 3629131 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 50.0 | 3.31e-01 | 96.9% | 59.3% |
| 5067071 | 604.17.1.0 ↗ | alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like | 0.59 | 47.0 | 4.69e-01 | 87.5% | 89.2% |
| 4978572 | 604.17.1.1 ↗ | alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like › DUF447_C | 0.57 | 44.0 | 4.38e-01 | 87.5% | 89.9% |
| 2439589 | 109.4.1.1127 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_Cnot1 | 0.57 | 46.0 | 3.37e-01 | 96.9% | 42.3% |