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IMGVR_UViG_3300035556_000082-3300035556-Ga0394028_14341_14925_15488
Arc-VirIMGVR_UViG_3300035556_000082-3300035556-Ga0394028_14341_14925_15488
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 14-70
Domain cluster:
representative
D2
medium
residues 71-135
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2c5uA02 | 1.10.3550.20 | Mainly Alpha › Orthogonal Bundle › eoxyguanosinetriphosphate triphosphohydrolase fold › | 0.74 | 50.0 | 3.95e-01 | 70.8% | 59.5% |
| 3f5fA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 37.0 | 2.37e-01 | 96.9% | 11.5% |
| 6pe0E01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.71 | 51.0 | 5.56e-01 | 84.6% | 94.3% |
| 6b5cA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.67 | 54.0 | 4.92e-01 | 87.7% | 83.7% |
| 4d81A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.65 | 52.0 | 4.61e-01 | 87.7% | 66.0% |
| 6nmnA02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.64 | 47.0 | 3.77e-01 | 78.5% | 60.2% |
| 3uk6A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.64 | 49.0 | 4.61e-01 | 86.2% | 69.9% |
| 2c9oB03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.64 | 49.0 | 4.60e-01 | 86.2% | 69.9% |
| 6yttA01 | 1.10.8.190 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Carbon monoxide dehydrogenase alpha subunit. Chain M, domain 1 | 0.63 | 51.0 | 4.44e-01 | 89.2% | 98.0% |
| 4bbrM00 | 1.10.472.170 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.61 | 50.0 | 3.63e-01 | 92.3% | 35.2% |
| 3whkA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.61 | 46.0 | 4.53e-01 | 86.2% | 80.6% |
| 3o3mB01 | 1.20.1270.370 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.59 | 53.0 | 4.54e-01 | 100.0% | 67.0% |
| 3bg2A03 | 1.10.3410.10 | Mainly Alpha › Orthogonal Bundle › putative deoxyguanosinetriphosphate triphosphohydrolase fold › putative deoxyguanosinetriphosphate triphosphohydrolase like domain | 0.59 | 45.0 | 4.01e-01 | 84.6% | 96.9% |
| 2hkvA01 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.59 | 51.0 | 3.97e-01 | 96.9% | 97.2% |
| 1lucB00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.58 | 41.0 | 2.66e-01 | 75.4% | 21.3% |
| 3ceiA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.58 | 41.0 | 4.22e-01 | 86.2% | 77.8% |
| 3ungC01 | 3.30.70.2220 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › CRISPR-Cas system, Cmr2 subunit, D1 domain, cysteine cluster | 0.58 | 50.0 | 3.43e-01 | 96.9% | 44.6% |
| 6al9B00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.57 | 51.0 | 4.59e-01 | 100.0% | 90.1% |
| 6d5xA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.57 | 50.0 | 3.85e-01 | 100.0% | 94.7% |
| 5mxpA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 46.0 | 3.06e-01 | 95.4% | 87.1% |
| 1n1fA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.56 | 43.0 | 3.36e-01 | 87.7% | 53.6% |
| 1fm2B02 | 1.10.1400.10 | Mainly Alpha › Orthogonal Bundle › Penicillin amidase (Acylase) alpha subunit, N-terminal domain › Aminohydrolase, alpha-helical knob region | 0.55 | 43.0 | 3.34e-01 | 93.8% | 68.5% |
| 1lqlA02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.55 | 46.0 | 3.97e-01 | 92.3% | 97.1% |
| 2vixA03 | 1.20.1280.240 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.54 | 45.0 | 3.87e-01 | 96.9% | 58.4% |
| 2ld7A00 | 6.10.160.20 | Special › Helix non-globular › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.52 | 31.0 | 2.84e-01 | 75.4% | 40.4% |
| 3fmbA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 43.0 | 3.69e-01 | 90.8% | 83.0% |
| 1d8jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 42.0 | 3.92e-01 | 92.3% | 97.5% |
| 2ntxA01 | 1.20.58.2010 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › PRONE domain, subdomain 1 | 0.50 | 42.0 | 2.99e-01 | 95.4% | 82.4% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3629451 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.78 | 39.0 | 2.95e-01 | 100.0% | 23.6% |
| 4014891 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.71 | 59.0 | 5.20e-01 | 90.8% | 65.3% |
| 3919989 | 192.5.1.19 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › OCIA | 0.71 | 48.0 | 4.51e-01 | 70.8% | 63.7% |
| 4635810 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.70 | 55.0 | 5.54e-01 | 92.3% | 86.2% |
| 3591364 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.70 | 58.0 | 5.24e-01 | 92.3% | 75.6% |
| 3268426 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.69 | 54.0 | 5.08e-01 | 86.2% | 76.2% |
| 3695484 | 148.1.3.212 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_13 | 0.68 | 57.0 | 4.75e-01 | 90.8% | 56.4% |
| 5004605 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.68 | 55.0 | 5.75e-01 | 89.2% | 98.3% |
| 3909150 | 5063.1.1.15 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › OCIA | 0.67 | 46.0 | 4.44e-01 | 70.8% | 68.0% |
| 4284151 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.67 | 55.0 | 5.10e-01 | 92.3% | 70.6% |
| 3888457 | 180.1.1.1 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2 | 0.66 | 52.0 | 3.65e-01 | 87.7% | 75.9% |
| 4493829 | 101.1.2.39 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA | 0.63 | 38.0 | 3.26e-01 | 89.2% | 39.0% |
| 5000806 | 251.1.1.1 ↗ | a+b two layers › FYSH domain › FYSH domain › FYSH domain › SBDS | 0.62 | 43.0 | 3.61e-01 | 73.8% | 47.8% |
| 4989650 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.60 | 47.0 | 4.34e-01 | 90.8% | 68.9% |
| 3473137 | 604.9.1.2 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Strabismus | 0.58 | 45.0 | 4.07e-01 | 92.3% | 64.0% |
| 3473423 | 1203.1.2.0 ↗ | alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 | 0.58 | 51.0 | 3.95e-01 | 100.0% | 77.9% |
| 3716703 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.56 | 47.0 | 4.53e-01 | 90.8% | 100.0% |
| 4195836 | 2484.1.1.30 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Carbam_trans_N | 0.56 | 47.0 | 3.18e-01 | 92.3% | 26.2% |
| 3627163 | 197.1.1.0 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like | 0.56 | 48.0 | 3.91e-01 | 96.9% | 76.0% |
| 3260019 | 5001.1.1.32 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Solute_trans_a | 0.56 | 49.0 | 3.20e-01 | 100.0% | 82.2% |
| 3593398 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.55 | 43.0 | 3.62e-01 | 86.2% | 80.0% |
| 5052898 | 2004.5.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain | 0.53 | 40.0 | 3.08e-01 | 86.2% | 96.1% |
| 5078277 | 810.1.1.0 ↗ | a+b two layers › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) | 0.52 | 38.0 | 2.53e-01 | 78.5% | 24.3% |