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IMGVR_UViG_3300035670_009942-3300035670-Ga0310129_0025161_1_414

Arc-Vir

IMGVR_UViG_3300035670_009942-3300035670-Ga0310129_0025161_1_414

Quality

93.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-105
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17975.7 best RNR_Alpha 78.8 5.20e-22 90.6% 97.0%
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1l1lA01 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.87 83.0 5.05e-01 100.0% 20.9%
2wghA00 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.75 70.0 4.14e-01 100.0% 55.6%
1wgfA01 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.62 28.0 3.51e-01 71.9% 69.8%
2co9A00 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.61 28.0 2.79e-01 71.9% 38.2%
3gpvA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.56 37.0 3.50e-01 81.2% 56.6%
7pl7A01 3.90.70.80 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.56 45.0 3.87e-01 87.5% 69.7%
2lwxA00 1.10.8.840 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ribosome-associated complex head domain 0.54 35.0 3.61e-01 78.1% 69.3%
2ejsA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.54 31.0 3.76e-01 99.0% 93.1%
1j09A04 1.10.8.70 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 0.53 26.0 3.47e-01 88.5% 91.7%
2zt5A02 3.30.40.230 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › 0.53 38.0 3.98e-01 85.4% 85.7%
1amuA01 3.40.50.980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 41.0 3.47e-01 90.6% 81.2%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4340041 1074.1.1.3 alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › RNR_Alpha 0.93 89.0 8.29e-01 100.0% 95.7%
4594197 1074.1.1.3 alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › RNR_Alpha 0.91 84.0 7.84e-01 96.9% 91.3%
4230006 1074.1.1.3 alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › RNR_Alpha 0.88 80.0 7.41e-01 94.8% 88.7%
4951513 1074.1.1.1 alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN 0.87 58.0 6.94e-01 81.2% 100.0%
3519243 1074.1.1.0 alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases 0.84 68.0 5.25e-01 93.8% 41.0%
3277072 1074.1.1.1 alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN 0.81 67.0 5.65e-01 93.8% 54.2%
2472941 1074.1.1.1 alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN 0.81 60.0 6.71e-01 89.6% 98.7%
2325410 1074.1.1.2 alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN,RNR_N 0.79 67.0 5.51e-01 99.0% 53.4%
3515890 1074.1.1.1 alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN 0.79 69.0 6.29e-01 93.8% 72.0%
4983262 1074.1.1.1 alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN 0.78 64.0 6.52e-01 86.5% 91.6%
3966685 1074.1.1.1 alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN 0.78 68.0 6.31e-01 100.0% 75.0%
5034061 148.1.3.400 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Ribonuc_red_lgN 0.78 64.0 5.02e-01 86.5% 44.2%
2791176 1074.1.1.1 alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN 0.77 69.0 6.28e-01 100.0% 74.2%
3594035 1074.1.1.0 alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases 0.77 69.0 6.13e-01 100.0% 70.8%
3607359 103.2.1.1 alpha arrays › RuvA-C › ATP cone › ATP cone › Ribonuc_red_lgN 0.77 69.0 5.24e-01 100.0% 44.9%
4976420 1074.1.1.0 alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases 0.75 64.0 6.25e-01 91.7% 82.9%
5040103 103.2.1.1 alpha arrays › RuvA-C › ATP cone › ATP cone › Ribonuc_red_lgN 0.74 54.0 6.03e-01 78.1% 98.7%
3973872 103.2.1.1 alpha arrays › RuvA-C › ATP cone › ATP cone › Ribonuc_red_lgN 0.74 54.0 6.05e-01 77.1% 100.0%
4937369 103.2.1.1 alpha arrays › RuvA-C › ATP cone › ATP cone › Ribonuc_red_lgN 0.73 64.0 6.59e-01 94.8% 100.0%
3926533 143.1.1.0 alpha arrays › PABP domain-like › PABC(PABP) domain › PABC(PABP) domain 0.62 31.0 3.92e-01 77.1% 80.0%
3269328 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 32.0 2.10e-01 77.1% 11.9%
3222778 103.15.1.1 alpha arrays › RuvA-C › Mitoribosomal protein mS23 › Mitoribosomal protein mS23 › MRP-S23 0.61 37.0 3.36e-01 79.2% 44.5%
3419147 190.1.1.1 alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.61 28.0 2.88e-01 71.9% 43.3%
3270548 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.57 27.0 3.33e-01 72.9% 70.0%
3864894 190.1.1.1 alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.55 27.0 2.87e-01 72.9% 47.1%
3824946 4010.1.1.2 a+b complex topology › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 0.53 42.0 2.95e-01 86.5% 58.1%
4963816 101.1.17.0 alpha arrays › HTH › HTH › FF domain 0.53 31.0 3.05e-01 82.3% 52.4%
4571183 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.51 30.0 2.97e-01 85.4% 54.3%
3212604 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.51 39.0 3.36e-01 83.3% 67.5%
3703231 216.1.1.2 a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.51 37.0 3.17e-01 78.1% 96.4%
D2 medium residues 108-136
PDB
Domain cluster: representative
CATH (71)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ouzA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.84 70.0 5.00e-01 100.0% 33.0%
3vpbA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.84 71.0 4.87e-01 100.0% 29.7%
7bvaA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.84 67.0 4.75e-01 96.6% 31.2%
1mb3A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.81 67.0 4.48e-01 100.0% 25.6%
3uenA02 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.81 69.0 4.69e-01 100.0% 30.5%
4jgiB02 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.80 64.0 4.25e-01 100.0% 27.0%
1srrC00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.80 66.0 4.41e-01 100.0% 24.8%
2oqrA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.80 65.0 4.83e-01 100.0% 37.5%
3olcX03 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.80 67.0 4.82e-01 100.0% 36.8%
4gudB00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.80 62.0 3.78e-01 96.6% 14.4%
1vm6B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.79 65.0 4.23e-01 100.0% 24.4%
3ke8A01 3.40.1010.20 Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain 0.79 63.0 4.34e-01 100.0% 27.4%
5h80A01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.79 63.0 4.21e-01 100.0% 22.7%
1qdlB00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.79 61.0 3.76e-01 96.6% 14.9%
4hjhA02 3.40.120.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.79 63.0 4.68e-01 96.6% 35.8%
3uenA01 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.79 67.0 4.74e-01 100.0% 33.3%
2d8mA01 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.78 62.0 4.50e-01 100.0% 34.8%
4bmdA02 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.78 63.0 4.47e-01 100.0% 32.3%
3rqiA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.78 62.0 4.17e-01 100.0% 23.6%
1z0sA01 3.40.50.10330 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 0.77 62.0 4.12e-01 96.6% 23.4%
6r8gA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.77 58.0 3.83e-01 96.6% 20.4%
1wu7A03 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.77 62.0 4.40e-01 100.0% 34.0%
3snkA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.77 60.0 4.10e-01 100.0% 26.1%
2p2sA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.76 59.0 3.94e-01 100.0% 22.6%
3h5iA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.76 60.0 4.03e-01 96.6% 23.2%
2jxpA01 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.76 59.0 3.87e-01 96.6% 22.0%
2couA01 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.76 59.0 4.39e-01 100.0% 36.0%
3dnfA03 3.40.1010.20 Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain 0.76 56.0 3.79e-01 72.4% 21.2%
3hdvB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.76 63.0 4.20e-01 96.6% 23.0%
2c4kA01 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.75 59.0 3.75e-01 100.0% 24.0%
4wxmB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.75 59.0 3.96e-01 96.6% 22.5%
1dc7A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.75 56.0 3.85e-01 100.0% 24.2%
1m32A02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.74 57.0 3.42e-01 100.0% 12.6%
1b6sA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.73 55.0 4.47e-01 100.0% 41.4%
4hz2A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.73 55.0 4.18e-01 93.1% 35.8%
4n40A02 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.73 62.0 4.45e-01 100.0% 34.4%
5es6A01 3.40.50.170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain 0.73 57.0 3.51e-01 96.6% 15.3%
1l0bA01 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.72 54.0 3.85e-01 100.0% 28.0%
1ka9H00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.72 56.0 3.45e-01 96.6% 14.9%
3mw8A01 3.40.50.10090 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.71 55.0 3.82e-01 100.0% 24.8%
3re1A01 3.40.50.10090 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.71 56.0 3.87e-01 100.0% 23.8%
3n53A00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.71 54.0 3.79e-01 100.0% 24.8%
3uowB01 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.70 54.0 3.41e-01 96.6% 15.1%
2nteB01 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.70 51.0 3.80e-01 100.0% 30.3%
3uifA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.69 49.0 3.38e-01 72.4% 20.6%
6qrjA03 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 54.0 3.79e-01 96.6% 25.7%
3fzvA03 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.67 50.0 3.65e-01 100.0% 31.1%
3aekA03 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.67 57.0 3.83e-01 93.1% 24.4%
2v25A02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.67 48.0 3.64e-01 100.0% 31.7%
2xdqA03 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.66 52.0 3.55e-01 96.6% 25.0%
3kloA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 51.0 3.35e-01 96.6% 20.8%
2m5yA01 3.30.70.2390 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 44.0 3.49e-01 96.6% 35.6%
2ozzA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.64 44.0 3.48e-01 100.0% 33.0%
1ka1A02 3.40.190.80 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.63 53.0 3.52e-01 100.0% 66.7%
4z9nA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.62 48.0 3.57e-01 100.0% 31.1%
1p99A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.62 43.0 3.00e-01 93.1% 20.8%
2x26A02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.61 52.0 3.64e-01 96.6% 29.0%
3fbtA01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.60 45.0 3.08e-01 93.1% 22.9%
2qpqA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.59 39.0 2.95e-01 100.0% 30.6%
6o9aA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.59 47.0 3.39e-01 100.0% 28.3%
4h5gA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.58 41.0 3.19e-01 100.0% 30.5%
3hn0A02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.58 45.0 3.35e-01 93.1% 29.6%
2o1mA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.57 48.0 3.41e-01 100.0% 26.4%
5uh0A02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.56 39.0 3.08e-01 100.0% 34.4%
1al3A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.56 44.0 3.33e-01 100.0% 36.6%
1utbB02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.56 43.0 3.26e-01 100.0% 38.4%
2x7qA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.56 46.0 3.38e-01 100.0% 31.4%
4kzsA03 3.30.160.710 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 43.0 3.24e-01 96.6% 30.9%
1npyA01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.55 40.0 3.06e-01 93.1% 32.0%
3mpkA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.55 40.0 2.85e-01 82.8% 42.1%
4c0rA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.53 43.0 3.16e-01 100.0% 55.9%
ECOD (79)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5042849 2003.1.10.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.86 72.0 5.06e-01 96.6% 33.3%
4992307 2003.1.10.23 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › LysX_preATP_grasp 0.84 70.0 5.29e-01 96.6% 41.4%
1834181 2003.1.10.23 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › LysX_preATP_grasp 0.84 71.0 5.06e-01 100.0% 34.9%
4436240 7502.1.1.6 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HisZ_C 0.84 64.0 5.47e-01 96.6% 52.7%
4486652 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.84 71.0 4.31e-01 100.0% 17.8%
3602813 2003.1.10.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.83 67.0 4.87e-01 96.6% 36.5%
5037782 2003.1.10.23 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › LysX_preATP_grasp 0.83 68.0 4.95e-01 100.0% 35.3%
3737313 7568.1.1.2 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › PTCB-BRCT 0.82 70.0 4.81e-01 100.0% 32.0%
3205053 2003.1.1.120 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD-bd_HRPKS_sdrA 0.82 69.0 4.19e-01 100.0% 15.9%
4593957 2003.1.10.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.82 66.0 4.71e-01 96.6% 33.3%
3197621 7568.1.1.1 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT 0.82 70.0 4.88e-01 100.0% 33.7%
3701656 7568.1.1.1 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT 0.82 69.0 4.91e-01 100.0% 35.6%
1886886 2003.1.10.20 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › ATPgraspMvdD 0.82 67.0 4.45e-01 96.6% 25.4%
4339124 7502.1.1.0 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.82 67.0 5.44e-01 100.0% 53.3%
3506891 7568.1.1.2 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › PTCB-BRCT 0.82 70.0 4.86e-01 100.0% 33.7%
4991518 2003.1.10.23 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › LysX_preATP_grasp 0.81 65.0 4.95e-01 93.1% 40.0%
3400476 7568.1.1.1 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT 0.81 69.0 4.74e-01 100.0% 32.0%
4034184 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.81 64.0 4.22e-01 96.6% 22.3%
4641718 2003.1.1.120 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD-bd_HRPKS_sdrA 0.81 64.0 3.90e-01 93.1% 15.4%
3735484 7568.1.1.2 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › PTCB-BRCT 0.81 69.0 4.80e-01 100.0% 34.7%
3259607 7568.1.1.2 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › PTCB-BRCT 0.80 68.0 4.74e-01 100.0% 33.7%
3937446 7568.1.1.2 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › PTCB-BRCT 0.80 67.0 4.63e-01 100.0% 32.0%
2797622 2003.1.10.20 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › ATPgraspMvdD 0.80 66.0 4.36e-01 96.6% 24.6%
4599869 2003.1.10.23 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › LysX_preATP_grasp 0.80 67.0 4.84e-01 100.0% 35.3%
5000068 2003.1.10.23 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › LysX_preATP_grasp 0.79 65.0 4.70e-01 100.0% 34.4%
4241902 7568.1.1.2 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › PTCB-BRCT 0.79 65.0 4.36e-01 100.0% 26.7%
3652604 2007.9.1.0 a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain 0.79 65.0 3.94e-01 96.6% 16.3%
3611844 7568.1.1.2 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › PTCB-BRCT 0.79 66.0 4.78e-01 100.0% 35.3%
5015707 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.79 64.0 4.65e-01 93.1% 34.1%
2772510 2003.1.10.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.79 61.0 4.02e-01 93.1% 22.5%
2499765 7568.1.1.2 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › PTCB-BRCT 0.79 65.0 4.74e-01 100.0% 36.1%
3966175 2007.1.3.6 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › FleQ 0.78 64.0 4.14e-01 96.6% 20.7%
3343403 7568.1.1.0 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain 0.78 64.0 4.34e-01 100.0% 28.7%
4418639 2003.1.1.120 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD-bd_HRPKS_sdrA 0.78 65.0 4.02e-01 100.0% 18.4%
4984035 2003.1.10.23 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › LysX_preATP_grasp 0.78 62.0 4.54e-01 100.0% 35.6%
3925689 7568.1.1.1 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT 0.78 64.0 4.61e-01 100.0% 35.6%
4933349 2007.2.2.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like 0.77 60.0 4.51e-01 96.6% 36.3%
3962063 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.76 60.0 4.38e-01 100.0% 34.7%
5061841 2003.1.10.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.75 57.0 4.45e-01 100.0% 36.3%
3970375 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.75 56.0 3.99e-01 100.0% 28.2%
3928784 7568.1.1.1 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT 0.75 62.0 4.50e-01 100.0% 35.6%
3998328 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.74 56.0 3.25e-01 93.1% 9.7%
2995274 2007.1.3.6 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › FleQ 0.74 59.0 4.02e-01 100.0% 25.2%
5062622 2003.1.10.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.73 57.0 4.36e-01 96.6% 37.5%
3385848 2485.1.1.16 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › ArsC 0.73 57.0 3.95e-01 93.1% 25.7%
9462 2003.1.10.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › RS_preATP-grasp-like 0.73 54.0 4.27e-01 100.0% 37.2%
4411724 2007.1.6.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › Shikimate_dh_N 0.73 56.0 4.06e-01 100.0% 59.0%
3259564 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.72 58.0 4.33e-01 100.0% 35.3%
3227183 2004.1.1.572 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › HSNSD_N 0.72 54.0 3.33e-01 96.6% 14.1%
1153973 2485.1.1.40 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GST_N_3 0.72 53.0 5.30e-01 93.1% 96.7%
3782387 7568.1.1.4 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT_2 0.71 55.0 4.00e-01 100.0% 34.0%
4548858 7588.1.1.1 a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB 0.71 54.0 3.92e-01 100.0% 30.5%
3979043 2007.1.1.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like 0.71 53.0 3.96e-01 100.0% 32.6%
3972467 2003.1.1.150 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase, RmlD_sub_bind 0.71 53.0 3.13e-01 100.0% 10.5%
4967376 2007.1.8.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Uroporphyrinogen III synthase (U3S, HemD) › HEM4 0.70 57.0 3.75e-01 96.6% 20.3%
141123 2007.1.6.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › Shikimate_dh_N 0.70 58.0 4.02e-01 100.0% 32.4%
3224354 7568.1.1.0 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain 0.69 59.0 4.05e-01 100.0% 29.1%
4948293 206.1.3.21 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK 0.69 50.0 2.99e-01 100.0% 13.0%
3412105 2007.1.8.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Uroporphyrinogen III synthase (U3S, HemD) › HEM4 0.68 53.0 3.59e-01 96.6% 22.3%
4956966 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.67 51.0 3.67e-01 96.6% 28.6%
3947291 7523.1.1.15 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.67 57.0 3.58e-01 100.0% 16.8%
2492250 2485.1.1.13 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GST_N 0.66 51.0 5.09e-01 93.1% 93.3%
4928572 304.8.1.108 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PDT 0.65 53.0 3.31e-01 100.0% 38.9%
3976909 7523.1.1.15 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.65 47.0 2.86e-01 82.8% 90.9%
4987343 7597.1.1.0 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.64 43.0 3.49e-01 96.6% 34.1%
3974584 7523.1.1.15 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.64 52.0 3.73e-01 96.6% 34.0%
3611817 7568.1.1.0 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain 0.63 51.0 3.46e-01 96.6% 24.0%
3949182 7523.1.1.15 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.63 55.0 3.86e-01 100.0% 32.4%
4593395 7523.1.1.15 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.63 49.0 3.05e-01 100.0% 15.9%
3982398 7523.1.1.15 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.62 50.0 3.12e-01 100.0% 17.6%
3165988 7523.1.1.15 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.62 51.0 3.63e-01 100.0% 30.5%
4993769 7597.1.1.0 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.61 44.0 3.55e-01 100.0% 37.5%
3786736 7568.1.1.0 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain 0.60 41.0 3.07e-01 100.0% 31.3%
3971542 7523.1.1.0 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.60 50.0 3.55e-01 100.0% 30.9%
4565961 7523.1.1.15 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.60 50.0 3.12e-01 100.0% 17.1%
3284547 7523.1.1.15 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.60 50.0 3.55e-01 100.0% 30.9%
5046303 7504.1.1.1 a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Ham1p_like 0.58 39.0 2.60e-01 93.1% 14.4%
3979292 7523.1.1.15 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.55 41.0 3.09e-01 100.0% 32.7%
5008457 7523.1.1.13 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Lipoprotein_9 0.53 38.0 3.04e-01 100.0% 33.0%