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IMGVR_UViG_3300035670_012723-3300035670-Ga0310129_0021449_25_495
Arc-VirIMGVR_UViG_3300035670_012723-3300035670-Ga0310129_0021449_25_495
Identity
- Kingdom:
- archaea
Quality
81.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 61-143
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kztA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 35.0 | 3.00e-01 | 90.4% | 37.9% |
| 2b1xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 38.0 | 3.05e-01 | 86.7% | 34.7% |
| 3pieC05 | 2.170.260.40 | Mainly Beta › Beta Complex › paz domain › | 0.56 | 42.0 | 3.48e-01 | 84.3% | 67.1% |
| 1mknA00 | 2.20.60.10 | Mainly Beta › Single Sheet › Heparin-binding Growth Factor, Midkine; Chain A › Pleiotrophin/Midkine, N-terminal domain | 0.56 | 27.0 | 3.12e-01 | 74.7% | 61.0% |
| 4fczA00 | 3.10.450.710 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Tgt2/MlaC | 0.55 | 39.0 | 3.07e-01 | 100.0% | 33.9% |
| 4l8oA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 37.0 | 2.98e-01 | 86.7% | 37.2% |
| 5b4wA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 43.0 | 2.77e-01 | 91.6% | 24.2% |
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.52 | 30.0 | 3.45e-01 | 95.2% | 83.6% |
| 6fgjA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.52 | 40.0 | 3.36e-01 | 85.5% | 70.7% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4958484 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.56 | 46.0 | 4.40e-01 | 91.6% | 86.0% |
| 5073769 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.56 | 46.0 | 4.38e-01 | 91.6% | 86.0% |
| 4950610 | 7.1.1.10 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_6 | 0.56 | 46.0 | 4.36e-01 | 91.6% | 86.0% |
| 3418892 | 5.1.8.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 › DUF295 | 0.54 | 30.0 | 2.68e-01 | 83.1% | 37.4% |
| 4428693 | 7525.1.1.1 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_1 | 0.53 | 37.0 | 3.02e-01 | 72.3% | 100.0% |
| 5055003 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 33.0 | 3.06e-01 | 86.7% | 48.1% |
| 3353021 | 1.1.11.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › At2g31720-like | 0.51 | 36.0 | 3.16e-01 | 75.9% | 71.6% |
| 3759376 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 30.0 | 2.69e-01 | 81.9% | 41.7% |
| 3521669 | 220.1.1.155 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26658 | 0.50 | 40.0 | 3.68e-01 | 97.6% | 66.7% |