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IMGVR_UViG_3300036470_000077-3300036470-Ga0393245_11517_1033_2124

Arc-Vir

IMGVR_UViG_3300036470_000077-3300036470-Ga0393245_11517_1033_2124

Quality

95.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 89-173
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2h56A02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.55 41.0 3.78e-01 96.5% 59.6%
4fd4A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 46.0 3.50e-01 96.5% 50.9%
5ffdA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.54 39.0 3.42e-01 78.8% 85.4%
1sezA03 1.10.3110.10 Mainly Alpha › Orthogonal Bundle › protoporphyrinogen ix oxidase, domain 3 › protoporphyrinogen ix oxidase, domain 3 0.53 45.0 4.42e-01 98.8% 88.0%
4unfA02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.53 41.0 3.69e-01 98.8% 59.8%
1oaoC01 1.10.8.190 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Carbon monoxide dehydrogenase alpha subunit. Chain M, domain 1 0.52 33.0 2.93e-01 88.2% 44.2%
2hpsA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.52 44.0 3.56e-01 98.8% 83.7%
3l9tA01 1.10.1240.70 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.51 32.0 3.30e-01 72.9% 65.1%
3au3A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.51 40.0 2.77e-01 85.9% 39.2%
2xseA00 1.20.120.1440 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › JBP1, DNA-binding domain 0.51 45.0 3.68e-01 100.0% 61.0%
4u2xF00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.50 41.0 3.27e-01 89.4% 66.3%
4fqnC00 1.20.1160.20 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › 0.50 37.0 3.77e-01 83.5% 81.2%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4651992 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.94 88.0 5.46e-01 100.0% 21.3%
4928215 310.2.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.53 43.0 4.14e-01 100.0% 77.9%
3852488 108.1.1.92 alpha arrays › EF-hand › EF-hand-related › EF-hand › USP32_N 0.53 42.0 3.36e-01 85.9% 67.4%
3729903 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 38.0 4.16e-01 87.1% 97.1%
2161598 2484.1.1.62 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PRP8_domainIV 0.51 44.0 3.10e-01 96.5% 43.9%
3614991 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.51 42.0 4.03e-01 92.9% 93.0%
4357827 3455.1.1.0 alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors 0.50 34.0 3.78e-01 74.1% 87.0%
D2 medium residues 1-74_182-238_310-363
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF03275.20 best GLF 58.0 1.50e-15 41.1% 31.5%
PF13450.13 NAD_binding_8 60.3 2.40e-16 36.2% 98.5%
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bi7A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.95 93.0 9.03e-01 100.0% 94.0%
1i8tA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.94 91.0 9.00e-01 100.0% 95.8%
3ukhA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.85 81.0 5.74e-01 100.0% 91.5%
3nksA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.85 81.0 5.83e-01 100.0% 98.3%
3ng7X01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.80 76.0 7.13e-01 100.0% 95.9%
3rhaA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.80 76.0 5.51e-01 100.0% 95.4%
1ps9A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.79 57.0 6.38e-01 99.5% 93.1%
2vvlG01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.78 75.0 6.58e-01 100.0% 84.8%
5ttjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.78 74.0 6.94e-01 100.0% 94.6%
2b9wA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.78 74.0 7.06e-01 100.0% 95.2%
3ka7A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.77 72.0 6.84e-01 97.8% 98.1%
1rsgA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.75 71.0 6.42e-01 100.0% 93.5%
4y4mC00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.74 71.0 6.23e-01 100.0% 86.3%
1lqtA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.74 56.0 5.28e-01 100.0% 66.1%
4c3xA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.74 69.0 5.45e-01 100.0% 97.2%
1gteA03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.72 60.0 5.90e-01 100.0% 81.6%
5x68A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.70 66.0 5.24e-01 100.0% 89.2%
3kkjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.70 53.0 5.81e-01 100.0% 93.5%
2braA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.69 66.0 4.74e-01 100.0% 69.6%
4x9mA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.69 65.0 6.07e-01 100.0% 88.9%
3uoxB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.69 65.0 5.46e-01 100.0% 69.2%
1o5wA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.69 63.0 6.17e-01 100.0% 89.8%
1d5tA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.69 57.0 5.88e-01 100.0% 90.9%
2ivdB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.68 56.0 5.96e-01 100.0% 95.7%
1mo9A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.68 55.0 5.36e-01 100.0% 77.0%
3lovA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.67 50.0 5.51e-01 100.0% 92.8%
1l9fA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.67 55.0 5.52e-01 100.0% 84.1%
3ab1B01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.66 62.0 5.86e-01 100.0% 85.8%
3i6dA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.65 51.0 5.48e-01 100.0% 93.6%
5ygqA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.65 61.0 5.75e-01 100.0% 83.6%
3icsA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.65 35.0 3.09e-01 94.1% 37.6%
2jaeA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.65 56.0 5.64e-01 100.0% 90.3%
4hn9A01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.63 37.0 4.32e-01 99.5% 81.5%
1vg0A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 59.0 5.73e-01 100.0% 92.7%
2we8A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 44.0 4.79e-01 100.0% 94.8%
2oo3A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 51.0 4.56e-01 98.4% 96.6%
4bluB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 51.0 4.51e-01 98.4% 83.3%
2ynmD01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.54 38.0 4.24e-01 98.9% 91.2%
3lcvB02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 38.0 3.77e-01 98.9% 66.3%
3fdjA01 3.40.50.10440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 0.53 28.0 3.52e-01 100.0% 85.3%
3b0cW00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.52 23.0 3.44e-01 82.7% 100.0%
3frhA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 36.0 3.62e-01 98.9% 69.4%
1mdbA01 3.40.50.980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 32.0 3.45e-01 92.4% 71.5%
6jtdA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.51 42.0 4.11e-01 100.0% 80.5%
3ftdA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 37.0 3.85e-01 96.8% 80.2%
ECOD (93)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None 0.96 94.0 7.02e-01 100.0% 94.7%
3287364 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.96 94.0 7.02e-01 100.0% 94.7%
3980822 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.96 94.0 7.05e-01 100.0% 94.0%
1289768 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.96 94.0 7.14e-01 100.0% 97.0%
4651992 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.96 93.0 6.96e-01 100.0% 96.2%
4954353 2003.1.3.36 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › GLF 0.95 93.0 7.13e-01 99.5% 98.6%
5050752 2003.1.3.36 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › GLF 0.94 92.0 7.00e-01 100.0% 93.3%
4328790 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.94 91.0 6.96e-01 100.0% 98.1%
None 0.91 68.0 6.01e-01 76.2% 96.4%
5055685 2003.1.3.27 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Amino_oxidase 0.91 88.0 6.29e-01 100.0% 96.9%
5029346 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.90 87.0 6.24e-01 100.0% 97.6%
4988239 2003.1.3.27 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Amino_oxidase 0.89 86.0 6.17e-01 100.0% 95.2%
5016542 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.88 85.0 6.08e-01 100.0% 95.1%
5056036 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.87 84.0 6.01e-01 100.0% 93.4%
5075112 2003.1.3.27 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Amino_oxidase 0.87 84.0 6.10e-01 100.0% 96.9%
3998599 2003.1.3.27 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Amino_oxidase 0.87 83.0 5.95e-01 100.0% 95.6%
3994592 2003.1.3.27 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Amino_oxidase 0.87 83.0 5.95e-01 100.0% 95.7%
4940843 2003.1.2.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.87 83.0 6.13e-01 100.0% 98.8%
3937159 244.1.1.6 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.85 81.0 5.88e-01 100.0% 96.3%
3793683 244.1.1.6 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.85 81.0 5.76e-01 100.0% 95.6%
3618062 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.85 81.0 5.85e-01 100.0% 95.3%
3284288 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.83 78.0 5.50e-01 99.5% 98.5%
3991851 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.82 79.0 5.85e-01 100.0% 86.6%
3289948 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.82 78.0 5.47e-01 100.0% 96.7%
4252456 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.82 78.0 5.63e-01 100.0% 96.1%
3289005 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.81 77.0 6.15e-01 100.0% 96.5%
4275083 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.81 77.0 6.09e-01 100.0% 95.5%
4380575 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.81 77.0 6.20e-01 100.0% 93.4%
4116848 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.81 77.0 5.80e-01 100.0% 86.1%
5055431 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.81 77.0 5.66e-01 100.0% 98.4%
4012447 2003.1.2.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.81 77.0 6.11e-01 100.0% 94.8%
3854990 2003.1.2.73 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase, Pyr_redox_2, NAD_binding_8 0.81 77.0 5.49e-01 100.0% 89.1%
None 0.81 77.0 5.95e-01 100.0% 93.3%
4369302 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.81 77.0 6.13e-01 100.0% 95.3%
4011368 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.81 77.0 6.13e-01 100.0% 97.1%
3528883 244.1.1.6 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.81 77.0 5.51e-01 100.0% 91.1%
3237980 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.81 76.0 5.21e-01 100.0% 90.6%
4105360 2003.1.2.73 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase, Pyr_redox_2, NAD_binding_8 0.81 77.0 5.86e-01 100.0% 87.2%
None 0.81 76.0 5.51e-01 100.0% 92.8%
4162412 2003.1.2.73 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase, Pyr_redox_2, NAD_binding_8 0.81 76.0 5.45e-01 100.0% 89.7%
3954100 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.81 76.0 5.76e-01 100.0% 94.4%
None 0.81 76.0 5.46e-01 100.0% 91.4%
4955124 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.81 77.0 5.48e-01 100.0% 94.9%
3288575 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.80 76.0 5.62e-01 100.0% 99.1%
5034008 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.80 76.0 5.55e-01 100.0% 98.0%
4484803 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.80 76.0 5.41e-01 100.0% 96.2%
3957223 244.1.1.6 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.80 76.0 5.58e-01 100.0% 97.6%
4080040 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.80 76.0 5.44e-01 100.0% 98.6%
3956843 2003.1.2.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.80 76.0 6.05e-01 100.0% 95.4%
3801269 2003.1.2.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.80 76.0 5.61e-01 100.0% 79.8%
3268287 244.1.1.6 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.80 76.0 5.52e-01 100.0% 95.9%
3645636 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.80 76.0 5.39e-01 100.0% 89.6%
4978089 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.80 76.0 5.63e-01 100.0% 97.9%
4393957 244.1.1.6 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.80 76.0 5.38e-01 100.0% 89.6%
5073443 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.80 76.0 5.53e-01 100.0% 98.0%
3722125 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.80 75.0 5.87e-01 100.0% 94.9%
4241427 244.1.1.6 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.80 76.0 5.32e-01 100.0% 90.6%
4983912 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.80 76.0 5.38e-01 100.0% 97.4%
4167078 244.1.1.6 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.80 75.0 5.40e-01 100.0% 98.2%
3289443 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.80 75.0 5.91e-01 100.0% 98.9%
3430888 244.1.1.6 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.79 75.0 5.33e-01 100.0% 95.5%
3562710 2003.1.2.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.79 75.0 5.70e-01 100.0% 90.6%
4439700 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.79 75.0 5.38e-01 100.0% 96.3%
5051150 2003.1.2.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO 0.79 75.0 5.87e-01 100.0% 96.2%
5046823 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.79 75.0 5.44e-01 100.0% 92.6%
4586455 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.79 75.0 5.33e-01 100.0% 94.3%
4964203 2003.1.2.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.79 75.0 7.13e-01 100.0% 96.3%
4679614 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.79 75.0 5.26e-01 100.0% 88.8%
3221695 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.79 74.0 5.73e-01 100.0% 95.8%
3899110 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.79 75.0 5.94e-01 100.0% 97.7%
5072835 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.79 75.0 5.32e-01 100.0% 94.9%
5010720 2003.1.2.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.79 75.0 5.57e-01 100.0% 96.0%
3836792 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.78 74.0 5.45e-01 100.0% 93.3%
3927172 244.1.1.6 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.78 75.0 5.34e-01 100.0% 93.2%
3349069 2003.1.2.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.78 75.0 6.51e-01 100.0% 94.3%
4661793 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.78 74.0 5.82e-01 100.0% 96.1%
3625235 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.78 75.0 5.89e-01 100.0% 96.5%
4011138 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.78 74.0 5.24e-01 100.0% 93.1%
3924018 2003.1.2.9 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GDI 0.78 74.0 5.26e-01 100.0% 98.4%
5044418 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.78 73.0 5.26e-01 100.0% 97.3%
4940166 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.78 73.0 5.50e-01 98.9% 98.5%
174089 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.77 74.0 5.97e-01 100.0% 97.2%
4560221 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.77 74.0 6.80e-01 100.0% 95.6%
3968031 2003.1.2.73 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase, Pyr_redox_2, NAD_binding_8 0.77 74.0 6.82e-01 100.0% 96.9%
3960361 2003.1.3.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain 0.76 61.0 5.45e-01 81.6% 96.3%
3289424 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.76 72.0 5.70e-01 100.0% 99.1%
4234295 2003.1.2.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.76 72.0 5.59e-01 100.0% 97.0%
2816797 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.73 59.0 5.22e-01 82.7% 96.8%
3961168 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.69 59.0 4.40e-01 89.7% 71.0%
3597609 2003.1.3.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain 0.69 57.0 5.87e-01 98.9% 90.3%
1879027 244.1.1.6 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.68 58.0 4.49e-01 89.2% 97.4%
3222987 2003.1.2.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 0.66 62.0 5.24e-01 100.0% 65.5%
4998457 2003.1.2.40 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_oxidored 0.64 60.0 4.75e-01 100.0% 96.9%
D3 medium residues 75-88_239-309
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03275.20 best GLF 70.3 2.70e-19 94.1% 35.5%
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ka7A02 3.90.660.50 Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › 0.78 69.0 5.10e-01 95.3% 100.0%
3kkjA02 3.90.660.10 Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › 0.73 66.0 5.17e-01 100.0% 74.9%
3lovA02 3.90.660.20 Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › Protoporphyrinogen oxidase, mitochondrial; domain 2 0.72 65.0 4.88e-01 100.0% 76.2%
3i6dA02 3.90.660.20 Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › Protoporphyrinogen oxidase, mitochondrial; domain 2 0.70 63.0 4.84e-01 100.0% 75.0%
3nrnA02 3.90.660.50 Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › 0.68 59.0 4.64e-01 95.3% 99.4%
1rsgA02 3.90.660.10 Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › 0.67 58.0 4.21e-01 95.3% 97.5%
3qj4A02 3.90.660.10 Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › 0.66 60.0 4.69e-01 100.0% 71.0%
2olnA02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.64 56.0 4.57e-01 98.8% 99.4%
3ijtB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 45.0 3.74e-01 74.1% 81.8%
2gmhA02 3.30.9.90 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › 0.61 54.0 4.13e-01 100.0% 65.5%
2il5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 41.0 3.35e-01 75.3% 82.7%
2gjvA00 3.30.2000.10 Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like 0.57 40.0 3.44e-01 74.1% 52.2%
4fprB00 3.30.70.2910 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 42.0 3.72e-01 82.4% 91.4%
3bfmA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.55 40.0 3.17e-01 76.5% 52.0%
2vouA02 3.30.9.60 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › 0.55 46.0 3.94e-01 96.5% 94.6%
4mmnA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.54 39.0 3.35e-01 76.5% 70.2%
2w1rA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.54 39.0 3.56e-01 77.6% 79.5%
3so5A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 37.0 3.44e-01 71.8% 58.1%
3rbyA01 2.40.128.320 Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, N-terminal domain 0.52 37.0 3.10e-01 74.1% 92.7%
3on9A00 2.60.240.20 Mainly Beta › Sandwich › Viral Chemokine Inhibitor; Chain A › 0.52 37.0 3.12e-01 77.6% 86.3%
2vgaA00 2.60.240.10 Mainly Beta › Sandwich › Viral Chemokine Inhibitor; Chain A › Major secreted virus protein 0.51 37.0 2.93e-01 77.6% 88.1%
2e9wB05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 35.0 3.50e-01 71.8% 87.9%
2x1wL02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 37.0 3.45e-01 76.5% 82.9%
4hzoA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.50 36.0 2.58e-01 77.6% 94.4%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4651992 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.95 92.0 5.67e-01 100.0% 63.7%
3287364 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.95 91.0 5.63e-01 100.0% 61.0%
4328790 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.94 91.0 5.66e-01 100.0% 64.6%
None 0.94 90.0 5.59e-01 100.0% 61.0%
3980822 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.94 90.0 5.59e-01 100.0% 60.6%
3948424 2003.1.3.36 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › GLF 0.94 90.0 5.80e-01 100.0% 73.7%
1678273 244.1.1.7 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GLF 0.94 72.0 7.78e-01 80.0% 98.6%
1289768 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.93 90.0 5.62e-01 100.0% 62.3%
4954353 2003.1.3.36 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › GLF 0.92 89.0 5.57e-01 100.0% 63.6%
5050752 2003.1.3.36 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › GLF 0.90 86.0 5.39e-01 100.0% 59.2%
4940843 2003.1.2.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.83 77.0 4.77e-01 100.0% 75.5%
3988286 2003.1.3.36 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › GLF 0.81 79.0 5.73e-01 100.0% 68.7%
3592827 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.81 75.0 4.59e-01 100.0% 68.2%
5018855 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.81 74.0 4.65e-01 100.0% 70.8%
5003939 2003.1.2.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.81 74.0 4.62e-01 100.0% 70.2%
3603755 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.80 73.0 4.65e-01 100.0% 68.7%
4955124 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.80 73.0 4.46e-01 100.0% 70.6%
5065334 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.79 73.0 4.59e-01 100.0% 73.3%
5058037 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.79 72.0 4.49e-01 100.0% 69.1%
5014234 2003.1.2.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.78 71.0 4.46e-01 100.0% 69.6%
3299531 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.77 70.0 4.63e-01 100.0% 69.4%
4152078 244.1.1.6 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.77 68.0 4.26e-01 96.5% 75.2%
3957553 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.76 69.0 4.34e-01 100.0% 72.8%
1828186 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.76 57.0 5.28e-01 78.8% 97.2%
3434425 2003.1.2.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.76 68.0 4.38e-01 100.0% 56.7%
4963574 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.75 68.0 4.31e-01 100.0% 70.2%
5046823 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.75 68.0 4.23e-01 100.0% 65.7%
3656286 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.74 67.0 5.68e-01 100.0% 97.1%
174089 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.74 67.0 4.45e-01 100.0% 61.2%
4419526 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.74 67.0 4.13e-01 100.0% 70.6%
3643996 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.73 66.0 4.07e-01 100.0% 61.6%
3760822 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.73 53.0 4.90e-01 77.6% 94.5%
3674186 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.72 66.0 4.10e-01 100.0% 65.4%
3968030 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.72 62.0 5.63e-01 95.3% 100.0%
3899110 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.68 61.0 4.02e-01 100.0% 60.5%
3738757 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.67 60.0 3.67e-01 100.0% 62.3%
5033045 2003.1.2.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.61 54.0 3.54e-01 100.0% 69.0%
4003298 244.1.1.13 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › ETFQO_UQ-bd 0.60 51.0 4.30e-01 92.9% 100.0%
3472118 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 43.0 3.65e-01 77.6% 85.0%
3298884 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.58 49.0 4.49e-01 95.3% 100.0%
425117 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.50 36.0 3.36e-01 76.5% 77.7%
2046421 222.1.1.4 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.50 39.0 3.38e-01 87.1% 87.2%