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IMGVR_UViG_3300036473_000055-3300036473-Ga0400285_001795_6535_6855

Arc-Vir

IMGVR_UViG_3300036473_000055-3300036473-Ga0400285_001795_6535_6855

Identity

Kingdom:
archaea

Quality

90.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 31-98
PDB
Domain cluster: rep: IMGVR_UViG_2914868299_000002-2914868299-2914872449__D37-97
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4pt4B00 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.63 41.0 3.66e-01 77.9% 46.4%
2askA00 2.10.90.10 Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines 0.63 35.0 3.06e-01 72.1% 35.6%
2iieA01 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.60 38.0 3.33e-01 77.9% 41.7%
4ienA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 33.0 2.50e-01 79.4% 26.0%
4l8oA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 43.0 3.40e-01 100.0% 37.8%
2obdA02 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.54 43.0 3.32e-01 97.1% 64.6%
2fauA01 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 46.0 3.61e-01 100.0% 76.8%
2np2A00 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.51 34.0 3.07e-01 77.9% 47.1%
4n1vA00 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.50 33.0 3.07e-01 79.4% 49.5%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4508411 101.17.1.1 ↗ alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding 0.61 39.0 3.51e-01 77.9% 45.0%
4051851 101.17.1.1 ↗ alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding 0.60 39.0 3.47e-01 77.9% 45.0%
4240651 101.17.1.1 ↗ alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding 0.60 39.0 3.48e-01 77.9% 45.0%
5073165 101.17.1.0 ↗ alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins 0.60 39.0 3.55e-01 77.9% 50.0%
4227571 101.17.1.1 ↗ alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding 0.60 39.0 3.42e-01 77.9% 45.0%
4274974 101.17.1.1 ↗ alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding 0.59 39.0 3.42e-01 77.9% 45.0%
4284216 101.17.1.1 ↗ alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding 0.59 38.0 3.47e-01 77.9% 47.4%
4681823 101.17.1.1 ↗ alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding 0.59 39.0 3.43e-01 77.9% 45.0%
3964061 101.17.1.1 ↗ alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding 0.56 37.0 3.26e-01 77.9% 43.3%
1094951 243.1.1.26 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.55 43.0 3.40e-01 100.0% 37.8%
4940924 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 31.0 2.93e-01 72.1% 45.9%
4426454 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 39.0 2.18e-01 88.2% 11.2%
3593085 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 43.0 3.83e-01 97.1% 66.0%