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IMGVR_UViG_3300036953_000474-3300036953-Ga0377210_000969_14_844
Arc-VirIMGVR_UViG_3300036953_000474-3300036953-Ga0377210_000969_14_844
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 213-263
D2
medium
residues 119-170
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2blfB01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.58 | 41.0 | 3.93e-01 | 76.9% | 76.2% |
| 2zs0A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 49.0 | 3.70e-01 | 100.0% | 79.3% |
| 1g8aA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 44.0 | 3.10e-01 | 90.4% | 67.0% |
| 3ei3A04 | 1.10.150.910 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.55 | 47.0 | 4.08e-01 | 100.0% | 83.5% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 38.0 | 3.13e-01 | 75.0% | 95.1% |
| 2ozbB01 | 1.10.287.4070 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 37.0 | 2.90e-01 | 76.9% | 54.2% |
| 2yc3A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.52 | 45.0 | 3.04e-01 | 100.0% | 49.3% |
| 4zdnA02 | 1.10.1240.100 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.51 | 43.0 | 3.56e-01 | 94.2% | 56.4% |
| 2ofyA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.51 | 37.0 | 3.49e-01 | 94.2% | 62.9% |
| 4rg8A04 | 1.10.287.1240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 34.0 | 3.24e-01 | 71.2% | 67.7% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3818900 | 206.1.1.72 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal | 0.61 | 44.0 | 2.78e-01 | 78.8% | 52.6% |
| 3244085 | 109.54.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › Utp12 | 0.61 | 46.0 | 3.26e-01 | 98.1% | 26.2% |
| 3940302 | 109.54.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › Utp12 | 0.61 | 45.0 | 3.22e-01 | 94.2% | 27.3% |
| 3507662 | 109.54.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › Utp12 | 0.59 | 45.0 | 3.30e-01 | 98.1% | 30.7% |
| 4287928 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.58 | 49.0 | 4.22e-01 | 100.0% | 71.1% |
| 3682758 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.55 | 42.0 | 3.54e-01 | 84.6% | 66.7% |
| 3949921 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.53 | 42.0 | 3.24e-01 | 90.4% | 67.7% |