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IMGVR_UViG_3300036958_000695-3300036958-Ga0377216_009754_1_714
Arc-VirIMGVR_UViG_3300036958_000695-3300036958-Ga0377216_009754_1_714
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-106
Domain cluster:
rep: IMGVR_UViG_3300025737_000082-3300025737-Ga0208694_10032441__D4-96
D2
high
residues 127-237
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jqtA01 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.64 | 56.0 | 4.66e-01 | 98.2% | 63.2% |
| 1d2sA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 46.0 | 3.98e-01 | 76.6% | 54.1% |
| 2h0bC00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 46.0 | 3.87e-01 | 77.5% | 50.3% |
| 4agrB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 40.0 | 3.70e-01 | 72.1% | 69.4% |
| 3eb8B01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.56 | 31.0 | 4.03e-01 | 88.3% | 96.7% |
| 2sliA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 49.0 | 4.06e-01 | 96.4% | 56.6% |
| 3ligA02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.56 | 48.0 | 4.20e-01 | 95.5% | 75.1% |
| 4qt6A00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.55 | 47.0 | 4.22e-01 | 100.0% | 66.0% |
| 2p4oA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.55 | 43.0 | 3.17e-01 | 83.8% | 89.0% |
| 3hjhA02 | 3.30.2060.10 | Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain | 0.55 | 34.0 | 3.76e-01 | 80.2% | 79.1% |
| 4m0hA01 | 2.60.120.1440 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 42.0 | 3.96e-01 | 84.7% | 97.1% |
| 2jkbA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 46.0 | 3.90e-01 | 96.4% | 56.8% |
| 3hfqA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 39.0 | 2.83e-01 | 81.1% | 80.0% |
| 5h4eA02 | 3.30.920.50 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain | 0.51 | 31.0 | 3.06e-01 | 79.3% | 54.6% |
| 2qc5A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 41.0 | 2.97e-01 | 84.7% | 79.2% |
| 1ijqA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.50 | 45.0 | 3.40e-01 | 96.4% | 89.4% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3790425 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.63 | 47.0 | 4.15e-01 | 79.3% | 73.9% |
| 5021185 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.61 | 48.0 | 4.22e-01 | 86.5% | 56.6% |
| 5051212 | 506.2.1.2 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter | 0.58 | 35.0 | 3.89e-01 | 81.1% | 75.6% |
| 4135015 | 506.2.1.2 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter | 0.57 | 35.0 | 3.84e-01 | 81.1% | 75.6% |
| 1487392 | 10.1.1.8 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY | 0.55 | 47.0 | 4.22e-01 | 100.0% | 66.0% |
| 3965920 | 506.2.1.2 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter | 0.55 | 34.0 | 3.73e-01 | 81.1% | 75.6% |
| 4425568 | 5.1.4.163 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vgb_lyase | 0.54 | 43.0 | 3.15e-01 | 84.7% | 92.5% |
| 3387556 | 506.2.1.2 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter | 0.54 | 33.0 | 3.62e-01 | 80.2% | 75.6% |
| 3936800 | 10.1.1.92 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PF26430 | 0.53 | 46.0 | 3.61e-01 | 96.4% | 46.9% |
| 3500002 | 5.1.3.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL | 0.52 | 42.0 | 3.03e-01 | 85.6% | 68.5% |
| 3867662 | 10.1.1.69 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › CAND6-7_N | 0.51 | 44.0 | 3.93e-01 | 97.3% | 70.9% |
| 3806825 | 5.1.4.44 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1_2 | 0.51 | 43.0 | 2.99e-01 | 93.7% | 72.7% |
| 3866163 | 5.1.3.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b | 0.50 | 45.0 | 3.37e-01 | 97.3% | 88.1% |
| 3233901 | 5.1.3.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b | 0.50 | 45.0 | 3.32e-01 | 97.3% | 88.9% |
| 3591928 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 39.0 | 2.72e-01 | 82.9% | 88.4% |