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IMGVR_UViG_3300037067_001511-3300037067-Ga0378408_0008414_7878_8720
Arc-VirIMGVR_UViG_3300037067_001511-3300037067-Ga0378408_0008414_7878_8720
Identity
- Kingdom:
- archaea
Quality
73.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-69_175-254
Domain cluster:
rep: LC754405.1__BDX35550.1__MN1_830__00083__D8-103
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3jvoA00 | 1.10.3230.30 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › Phage gp6-like head-tail connector protein | 0.73 | 47.0 | 5.45e-01 | 78.5% | 90.6% |
| 2w9zA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 36.0 | 3.67e-01 | 74.8% | 69.9% |
| 4nooB00 | 1.10.8.1160 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.51 | 30.0 | 3.40e-01 | 99.3% | 77.9% |
| 1m62A00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.51 | 29.0 | 3.55e-01 | 74.1% | 87.4% |
| 3k2jA00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.51 | 34.0 | 3.54e-01 | 77.0% | 73.6% |
| 2d9dA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.51 | 29.0 | 3.45e-01 | 74.8% | 84.3% |
| 2uxwA04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.50 | 37.0 | 3.76e-01 | 76.3% | 86.9% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4953683 | 3281.1.2.1 ↗ | alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit 8 (Nqo8)-related › NADHdh | 0.53 | 41.0 | 3.17e-01 | 80.7% | 67.7% |
| 3582234 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.51 | 30.0 | 3.48e-01 | 74.1% | 79.0% |
| 3334512 | 601.1.2.103 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › PUB2_N | 0.51 | 36.0 | 3.55e-01 | 73.3% | 82.0% |
| 3998193 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 28.0 | 3.09e-01 | 76.3% | 65.5% |
| 5014939 | 601.7.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HepT-like | 0.50 | 39.0 | 3.84e-01 | 82.2% | 96.5% |
D2
high
residues 78-174
Domain cluster:
rep: MH727593.1__AXY83375.1__X__00058__D47-136
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dsdA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.61 | 42.0 | 3.87e-01 | 70.1% | 84.9% |
| 4dnuA00 | 2.130.10.30 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | 0.61 | 42.0 | 2.87e-01 | 72.2% | 53.0% |
| 2bv4A00 | 2.60.120.400 | Mainly Beta › Sandwich › Jelly Rolls › Calcium-mediated lectin | 0.60 | 41.0 | 3.90e-01 | 70.1% | 92.0% |
| 1t6lA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.60 | 42.0 | 3.15e-01 | 80.4% | 28.9% |
| 1zxuA00 | 2.40.160.200 | Mainly Beta › Beta Barrel › Porin › LURP1-related | 0.56 | 39.0 | 3.31e-01 | 71.1% | 85.8% |
| 4g59C02 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.56 | 45.0 | 3.90e-01 | 89.7% | 87.3% |
| 4dapA01 | 2.40.50.580 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 29.0 | 3.16e-01 | 71.1% | 58.7% |
| 1sxjH01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.55 | 38.0 | 3.57e-01 | 77.3% | 57.3% |
| 3b7fA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 43.0 | 2.92e-01 | 86.6% | 59.0% |
| 6f90A01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 40.0 | 2.96e-01 | 82.5% | 83.4% |
| 4g56D00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 40.0 | 2.91e-01 | 87.6% | 55.8% |
| 3er9B03 | 3.30.460.60 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Poxvirus poly(A) polymerase, nucleotidyltransferase domain | 0.50 | 36.0 | 3.20e-01 | 73.2% | 57.9% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2409295 | 3943.1.1.3 ↗ | beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › flgK_1st_1 | 0.75 | 61.0 | 6.25e-01 | 100.0% | 89.2% |
| 4157251 | 3943.1.1.0 ↗ | beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains | 0.70 | 49.0 | 5.50e-01 | 99.0% | 94.7% |
| 4632109 | 3943.1.1.5 ↗ | beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › WZC_N | 0.69 | 63.0 | 5.93e-01 | 100.0% | 95.7% |
| 3976533 | 3943.1.1.5 ↗ | beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › WZC_N | 0.69 | 60.0 | 5.98e-01 | 100.0% | 92.0% |
| 4006143 | 3943.1.1.5 ↗ | beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › WZC_N | 0.67 | 58.0 | 5.91e-01 | 100.0% | 95.8% |
| 4230933 | 3943.1.1.5 ↗ | beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › WZC_N | 0.67 | 58.0 | 5.93e-01 | 100.0% | 96.8% |
| 3946575 | 3943.1.1.5 ↗ | beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › WZC_N | 0.66 | 58.0 | 5.85e-01 | 100.0% | 97.9% |
| 4952337 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.60 | 34.0 | 3.40e-01 | 79.4% | 53.0% |
| 5056836 | 5.1.3.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylsulfotran_2 | 0.60 | 42.0 | 2.93e-01 | 73.2% | 40.0% |
| 3492938 | 300.1.1.2 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › DNase_II | 0.59 | 42.0 | 3.40e-01 | 73.2% | 74.6% |
| 5056748 | 5.1.3.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylsulfotran_2 | 0.59 | 41.0 | 2.84e-01 | 73.2% | 36.5% |
| 5055744 | 5.1.3.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylsulfotran_2 | 0.58 | 41.0 | 2.84e-01 | 73.2% | 32.7% |
| 2455597 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 41.0 | 2.78e-01 | 73.2% | 45.1% |
| 3930913 | 5.1.4.39 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC4_WD40 | 0.58 | 40.0 | 2.82e-01 | 72.2% | 74.0% |
| 4874730 | 5.1.4.350 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR41 | 0.57 | 40.0 | 2.82e-01 | 73.2% | 49.8% |
| 3980998 | 5.1.3.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylsulfotran_2 | 0.54 | 38.0 | 2.62e-01 | 73.2% | 42.5% |
| 166224 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 43.0 | 2.92e-01 | 86.6% | 59.0% |
| 5003400 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 33.0 | 3.28e-01 | 71.1% | 57.1% |
| 3663999 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.53 | 44.0 | 3.04e-01 | 90.7% | 80.9% |
| 3397066 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 43.0 | 2.97e-01 | 89.7% | 55.4% |
| 3424048 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.53 | 43.0 | 2.89e-01 | 90.7% | 47.7% |
| 3183717 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 42.0 | 2.72e-01 | 87.6% | 85.9% |
| 4981896 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.52 | 33.0 | 3.03e-01 | 82.5% | 45.2% |
| 3590203 | 2.1.1.83 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SfsA_N | 0.52 | 29.0 | 3.14e-01 | 71.1% | 63.7% |
| 4542774 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.50 | 37.0 | 3.54e-01 | 94.8% | 65.0% |
| 3825410 | 5.1.4.466 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR11_1st, Beta-prop_WDR11_2nd | 0.50 | 41.0 | 2.40e-01 | 90.7% | 18.2% |