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IMGVR_UViG_3300037067_003519-3300037067-Ga0378408_0036227_2_214
Arc-VirIMGVR_UViG_3300037067_003519-3300037067-Ga0378408_0036227_2_214
Identity
- Kingdom:
- archaea
Quality
92.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-69
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8gq6C01 | 3.30.230.130 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › Cullin; Chain C, Domain 2 | 0.57 | 42.0 | 3.21e-01 | 81.7% | 74.8% |
| 6iknD01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.53 | 43.0 | 2.95e-01 | 100.0% | 85.4% |
| 4ebrA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 39.0 | 2.94e-01 | 81.7% | 66.2% |
| 1flcB00 | 3.90.20.10 | Alpha Beta › Alpha-Beta Complex › Hemagglutinin Ectodomain; Chain B › | 0.51 | 35.0 | 2.74e-01 | 75.0% | 82.7% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3553982 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 47.0 | 2.84e-01 | 80.0% | 38.3% |
| 3940795 | 109.4.1.102 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › WAPL | 0.58 | 46.0 | 2.70e-01 | 86.7% | 47.4% |
| 5050302 | 205.1.1.0 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin | 0.57 | 32.0 | 2.94e-01 | 76.7% | 40.0% |
| 3928082 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.56 | 41.0 | 2.72e-01 | 80.0% | 45.9% |
| 4608282 | 2484.1.1.70 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FtsA | 0.55 | 39.0 | 2.40e-01 | 75.0% | 20.0% |
| 4969220 | 4013.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in QueA-like proteins (Pfam 02547) › a/b domain in QueA-like proteins (Pfam 02547) › a/b domain in QueA-like proteins (Pfam 02547) › Queuosine_synth | 0.53 | 41.0 | 2.91e-01 | 93.3% | 36.2% |