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IMGVR_UViG_3300037067_027639-3300037067-Ga0378408_0001213_19106_19357
Arc-VirIMGVR_UViG_3300037067_027639-3300037067-Ga0378408_0001213_19106_19357
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-74
Domain cluster:
rep: IMGVR_UViG_3300038956_000138-3300038956-Ga0239562_005928_5430_5627__D9-59
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1p4wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 59.0 | 5.00e-01 | 98.1% | 48.3% |
| 1k78I00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 59.0 | 5.86e-01 | 88.9% | 82.8% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 51.0 | 4.82e-01 | 100.0% | 61.2% |
| 4mtdD01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 55.0 | 4.76e-01 | 100.0% | 53.4% |
| 2qbyB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 59.0 | 5.04e-01 | 100.0% | 57.1% |
| 3mwmA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 54.0 | 4.91e-01 | 100.0% | 62.7% |
| 4kmfA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 51.0 | 4.92e-01 | 100.0% | 71.0% |
| 1z05A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 48.0 | 4.46e-01 | 100.0% | 56.9% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.67 | 60.0 | 4.97e-01 | 100.0% | 92.6% |
| 3d5lB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 50.0 | 4.15e-01 | 94.4% | 44.1% |
| 1vtnC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 54.0 | 4.54e-01 | 100.0% | 94.1% |
| 2fmyA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 59.0 | 5.04e-01 | 100.0% | 68.3% |
| 1ci4A00 | 1.10.150.40 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Barrier-to-autointegration factor, BAF | 0.60 | 52.0 | 4.47e-01 | 100.0% | 79.5% |
| 1n5uA05 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.60 | 50.0 | 4.05e-01 | 98.1% | 56.2% |
| 3f8mA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 53.0 | 4.98e-01 | 100.0% | 93.8% |
| 3d0sA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 52.0 | 4.59e-01 | 100.0% | 70.0% |
| 4mo7A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 49.0 | 3.74e-01 | 100.0% | 59.2% |
| 3hrdC02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.58 | 47.0 | 3.93e-01 | 100.0% | 62.8% |
| 2zm5A02 | 1.10.20.140 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › | 0.58 | 44.0 | 4.04e-01 | 85.2% | 62.5% |
| 2xubA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 42.0 | 3.83e-01 | 94.4% | 56.4% |
| 6w6jD01 | 1.10.1780.10 | Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain | 0.56 | 38.0 | 2.93e-01 | 72.2% | 90.8% |
| 1wloA00 | 3.90.1010.10 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.56 | 41.0 | 3.30e-01 | 88.9% | 76.5% |
| 1hw1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 47.0 | 4.34e-01 | 100.0% | 98.7% |
| 3e3vA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 41.0 | 4.07e-01 | 88.9% | 82.1% |
| 1t6jA03 | 1.10.274.20 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 | 0.55 | 45.0 | 3.83e-01 | 100.0% | 63.1% |
| 1yt3A02 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.55 | 39.0 | 3.34e-01 | 100.0% | 43.4% |
| 4c2dA02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.54 | 45.0 | 3.90e-01 | 94.4% | 97.6% |
| 2mh3A00 | 4.10.280.10 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain | 0.53 | 38.0 | 3.52e-01 | 75.9% | 62.9% |
| 1gcvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 41.0 | 3.18e-01 | 100.0% | 35.7% |
| 6s10A01 | 1.10.1710.10 | Mainly Alpha › Orthogonal Bundle › Fertility Inhibition Protein O; Chain: A; Domain 1 › ProQ/FinO domain | 0.51 | 40.0 | 3.49e-01 | 100.0% | 59.8% |
| 2gomA00 | 1.10.10.1270 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Sbi, C3 binding domain IV | 0.51 | 41.0 | 4.01e-01 | 98.1% | 78.7% |
| 6orcB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 36.0 | 2.78e-01 | 77.8% | 38.1% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4979322 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.84 | 75.0 | 6.79e-01 | 100.0% | 74.3% |
| 3969666 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.84 | 61.0 | 5.10e-01 | 100.0% | 46.7% |
| 3641442 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.83 | 76.0 | 5.99e-01 | 100.0% | 58.1% |
| 3646654 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 77.0 | 5.76e-01 | 100.0% | 50.0% |
| 5034428 | 101.1.2.139 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_23 | 0.82 | 62.0 | 6.46e-01 | 100.0% | 88.0% |
| 3421266 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 76.0 | 5.71e-01 | 100.0% | 50.0% |
| 4967690 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.81 | 65.0 | 6.70e-01 | 100.0% | 92.0% |
| 5083383 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 68.0 | 6.56e-01 | 100.0% | 83.3% |
| 3450546 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 73.0 | 5.51e-01 | 100.0% | 51.7% |
| 3489868 | 101.1.1.4 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PAX | 0.79 | 70.0 | 5.91e-01 | 100.0% | 60.0% |
| 3955434 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 60.0 | 6.19e-01 | 94.4% | 92.0% |
| 3369428 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 67.0 | 6.19e-01 | 100.0% | 75.7% |
| 3886202 | 101.1.1.4 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PAX | 0.77 | 62.0 | 6.24e-01 | 92.6% | 89.1% |
| 3254663 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 65.0 | 5.79e-01 | 94.4% | 68.0% |
| 3696367 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 66.0 | 5.93e-01 | 100.0% | 80.0% |
| 3578362 | 101.1.1.4 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PAX | 0.74 | 64.0 | 5.78e-01 | 100.0% | 72.0% |
| 3789626 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 60.0 | 5.74e-01 | 96.3% | 80.0% |
| 5022532 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 63.0 | 5.69e-01 | 100.0% | 78.7% |
| 3226857 | 101.1.1.4 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PAX | 0.72 | 60.0 | 5.24e-01 | 100.0% | 61.2% |
| 4013698 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 61.0 | 5.85e-01 | 100.0% | 84.6% |
| 3212935 | 101.1.1.4 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PAX | 0.72 | 58.0 | 5.63e-01 | 90.7% | 81.7% |
| 3982565 | 101.1.1.202 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_21 | 0.70 | 57.0 | 5.76e-01 | 92.6% | 90.9% |
| 3189296 | 101.1.2.68 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 | 0.70 | 58.0 | 4.26e-01 | 100.0% | 41.5% |
| 3589193 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 58.0 | 5.49e-01 | 98.1% | 78.5% |
| 3486504 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 58.0 | 5.84e-01 | 100.0% | 92.7% |
| 4314672 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.69 | 57.0 | 4.70e-01 | 100.0% | 49.5% |
| 3523688 | 101.1.1.281 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF25981 | 0.69 | 58.0 | 5.62e-01 | 100.0% | 85.0% |
| 5035624 | 101.1.2.54 ↗ | alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R | 0.69 | 56.0 | 4.93e-01 | 100.0% | 60.0% |
| 3924709 | 101.1.1.4 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PAX | 0.69 | 56.0 | 5.33e-01 | 94.4% | 78.5% |
| 5084007 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 54.0 | 4.90e-01 | 92.6% | 65.3% |
| 3684722 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.65 | 55.0 | 4.61e-01 | 100.0% | 78.0% |
| 4392375 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.65 | 53.0 | 4.39e-01 | 98.1% | 50.0% |
| 3422646 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 52.0 | 5.11e-01 | 100.0% | 83.3% |
| 5042440 | 610.3.1.1 ↗ | alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey | 0.64 | 53.0 | 3.83e-01 | 98.1% | 32.6% |
| 3928650 | 101.1.1.315 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CCD_aECM | 0.63 | 51.0 | 5.07e-01 | 100.0% | 95.0% |
| 4956188 | 610.3.1.1 ↗ | alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › GatB_Yqey | 0.63 | 50.0 | 3.63e-01 | 94.4% | 31.4% |
| 3442072 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.61 | 51.0 | 4.04e-01 | 100.0% | 44.8% |
| 3741476 | 101.1.2.527 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_RGF3 | 0.61 | 52.0 | 4.31e-01 | 100.0% | 69.0% |
| 4007965 | 162.1.1.1 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD | 0.60 | 48.0 | 4.04e-01 | 100.0% | 86.4% |
| 5026909 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 48.0 | 4.39e-01 | 100.0% | 67.5% |
| 3335282 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.59 | 46.0 | 4.64e-01 | 90.7% | 94.5% |
| 3602462 | 101.1.2.26 ↗ | alpha arrays › HTH › HTH › winged helix domain › HxlR | 0.58 | 47.0 | 3.93e-01 | 98.1% | 58.1% |
| 3877844 | 529.1.1.2 ↗ | few secondary structure elements › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › BSMAP | 0.57 | 48.0 | 4.16e-01 | 100.0% | 68.9% |
| 4972181 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 43.0 | 4.05e-01 | 100.0% | 68.6% |
| 3224103 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 45.0 | 3.54e-01 | 92.6% | 40.0% |
| 3975669 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.53 | 40.0 | 3.43e-01 | 90.7% | 87.6% |
| 4031496 | 162.1.1.1 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD | 0.51 | 43.0 | 3.42e-01 | 98.1% | 76.5% |
| 3781489 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.50 | 40.0 | 3.32e-01 | 98.1% | 53.9% |