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IMGVR_UViG_3300037067_027639-3300037067-Ga0378408_0001213_23949_24278
Arc-VirIMGVR_UViG_3300037067_027639-3300037067-Ga0378408_0001213_23949_24278
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-108
Domain cluster:
rep: NC_073317.1__YP_010749072.1__QCF72_gp16__00016__D4-119
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4rqyA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.71 | 50.0 | 4.71e-01 | 100.0% | 59.3% |
| 3nziA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.71 | 50.0 | 4.97e-01 | 100.0% | 69.8% |
| 2hrvA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.69 | 49.0 | 5.03e-01 | 100.0% | 77.9% |
| 3lnnA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.65 | 45.0 | 4.67e-01 | 77.8% | 76.3% |
| 1ltoA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.65 | 51.0 | 4.92e-01 | 100.0% | 75.2% |
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.64 | 50.0 | 4.09e-01 | 100.0% | 46.3% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.64 | 49.0 | 4.58e-01 | 100.0% | 65.6% |
| 2p5zX01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.63 | 49.0 | 4.13e-01 | 100.0% | 50.0% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.62 | 49.0 | 5.08e-01 | 84.8% | 91.6% |
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.61 | 49.0 | 4.06e-01 | 85.9% | 49.4% |
| 3f3bA00 | 2.40.10.370 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 | 0.61 | 56.0 | 5.36e-01 | 100.0% | 89.6% |
| 6wl5A01 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.59 | 40.0 | 3.58e-01 | 71.7% | 98.7% |
| 5qinA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 39.0 | 4.23e-01 | 100.0% | 80.0% |
| 3g2fA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 39.0 | 4.17e-01 | 100.0% | 78.2% |
| 1t7vA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 35.0 | 3.66e-01 | 75.8% | 67.8% |
| 1y12B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.56 | 50.0 | 4.33e-01 | 100.0% | 75.0% |
| 4pbdA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 38.0 | 3.81e-01 | 77.8% | 72.5% |
| 2pmzB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.52 | 36.0 | 3.37e-01 | 70.7% | 89.5% |
| 2icsA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.52 | 29.0 | 2.95e-01 | 96.0% | 54.5% |
| 1twfB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.51 | 35.0 | 3.30e-01 | 70.7% | 89.5% |
| 2crfA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 38.0 | 3.56e-01 | 78.8% | 80.0% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5003311 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 70.0 | 6.73e-01 | 100.0% | 94.5% |
| 5082946 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 59.0 | 6.28e-01 | 82.8% | 100.0% |
| 3532116 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.70 | 50.0 | 3.87e-01 | 100.0% | 34.0% |
| 4169622 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.68 | 49.0 | 3.82e-01 | 100.0% | 34.1% |
| 3943285 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.68 | 63.0 | 6.07e-01 | 100.0% | 94.5% |
| 3624214 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 39.0 | 4.18e-01 | 82.8% | 65.9% |
| 3973341 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 50.0 | 5.38e-01 | 92.9% | 91.8% |
| 1147338 | 1.1.5.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pico_P2A | 0.67 | 48.0 | 4.30e-01 | 100.0% | 52.8% |
| 3981227 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 47.0 | 5.25e-01 | 84.8% | 96.0% |
| 3843527 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.67 | 50.0 | 3.85e-01 | 100.0% | 35.1% |
| 4094235 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.66 | 51.0 | 4.73e-01 | 100.0% | 65.6% |
| 4402697 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.65 | 50.0 | 4.73e-01 | 100.0% | 67.5% |
| 1914511 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.65 | 49.0 | 4.58e-01 | 100.0% | 63.0% |
| 3949052 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 42.0 | 4.43e-01 | 80.8% | 75.6% |
| 4217523 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.62 | 49.0 | 4.56e-01 | 100.0% | 66.4% |
| 4562905 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.62 | 49.0 | 4.59e-01 | 100.0% | 68.0% |
| 5002753 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.61 | 47.0 | 5.10e-01 | 84.8% | 95.3% |
| 4393593 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.61 | 50.0 | 5.12e-01 | 100.0% | 91.6% |
| 3397468 | 11.1.1.822 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF229 | 0.60 | 37.0 | 3.69e-01 | 84.8% | 58.1% |
| 3604610 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.60 | 38.0 | 4.37e-01 | 73.7% | 95.4% |
| 4934715 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.59 | 51.0 | 3.91e-01 | 96.0% | 85.9% |
| 4889788 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.58 | 49.0 | 5.03e-01 | 100.0% | 94.8% |
| 5062627 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.57 | 43.0 | 4.60e-01 | 100.0% | 92.9% |
| 4809346 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.56 | 41.0 | 4.38e-01 | 77.8% | 95.3% |
| 3909420 | 11.1.1.129 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Interfer-bind | 0.55 | 35.0 | 3.58e-01 | 82.8% | 66.3% |
| 3966429 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.55 | 44.0 | 4.55e-01 | 100.0% | 96.7% |
| 3597372 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.55 | 48.0 | 3.51e-01 | 100.0% | 42.8% |
| 3844943 | 11.1.1.117 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EpoR_lig-bind | 0.53 | 35.0 | 3.56e-01 | 77.8% | 68.4% |
| 3933891 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.53 | 42.0 | 4.03e-01 | 100.0% | 73.0% |
| 4810019 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.53 | 46.0 | 4.46e-01 | 100.0% | 88.2% |
| 3715053 | 11.2.1.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › B9-C2 | 0.52 | 41.0 | 3.39e-01 | 85.9% | 85.4% |
| 4960453 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.52 | 38.0 | 3.79e-01 | 100.0% | 74.3% |
| 3489664 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.51 | 38.0 | 3.65e-01 | 83.8% | 67.5% |