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IMGVR_UViG_3300037067_027639-3300037067-Ga0378408_0001213_670_1311
Arc-VirIMGVR_UViG_3300037067_027639-3300037067-Ga0378408_0001213_670_1311
Identity
- Kingdom:
- archaea
Quality
62.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 161-212
Domain cluster:
rep: IMGVR_UViG_3300009121_000002-3300009121-Ga0118671_10002284__D117-173
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ch5B02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.74 | 58.0 | 3.92e-01 | 86.5% | 51.0% |
| 2yhsA01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.74 | 52.0 | 4.22e-01 | 78.8% | 40.2% |
| 2qsrA01 | 3.90.1150.50 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain | 0.73 | 55.0 | 3.86e-01 | 80.8% | 98.7% |
| 2m7bA00 | 1.10.10.1920 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.71 | 58.0 | 5.17e-01 | 94.2% | 89.6% |
| 2qbyA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 57.0 | 4.85e-01 | 94.2% | 82.2% |
| 2qbyB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 56.0 | 4.73e-01 | 94.2% | 80.2% |
| 4etsA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 55.0 | 4.79e-01 | 94.2% | 69.0% |
| 1t98A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 53.0 | 4.65e-01 | 94.2% | 83.9% |
| 1abvA00 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.65 | 51.0 | 4.24e-01 | 92.3% | 89.5% |
| 1sxjB03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.65 | 51.0 | 4.29e-01 | 88.5% | 98.9% |
| 7s03A01 | 1.10.10.1450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.63 | 51.0 | 5.22e-01 | 94.2% | 98.0% |
| 2c0kB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.63 | 55.0 | 3.97e-01 | 98.1% | 53.7% |
| 6fhpD00 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.63 | 45.0 | 4.29e-01 | 76.9% | 87.1% |
| 1tzzB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.63 | 48.0 | 3.64e-01 | 82.7% | 83.2% |
| 3stoA01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.62 | 52.0 | 3.54e-01 | 100.0% | 42.9% |
| 3q45A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.62 | 46.0 | 3.57e-01 | 82.7% | 34.9% |
| 2ig3A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.62 | 45.0 | 3.50e-01 | 80.8% | 38.6% |
| 1o0uA01 | 3.40.1480.10 | Alpha Beta › 3-Layer(aba) Sandwich › glycerate kinase, domain 1 › MOFRL domain | 0.61 | 49.0 | 3.55e-01 | 100.0% | 64.2% |
| 4r42A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.61 | 56.0 | 3.72e-01 | 100.0% | 79.7% |
| 2lhrA00 | 1.20.58.1270 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 50.0 | 4.45e-01 | 100.0% | 62.8% |
| 4z4qA04 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.60 | 53.0 | 4.47e-01 | 100.0% | 97.8% |
| 3hwrA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.60 | 47.0 | 3.73e-01 | 96.2% | 55.8% |
| 4kw3A00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.60 | 50.0 | 3.23e-01 | 96.2% | 27.4% |
| 2v40A02 | 1.10.300.10 | Mainly Alpha › Orthogonal Bundle › Adenylosuccinate Synthetase, subunit A; domain 2 › Adenylosuccinate Synthetase, subunit A, domain 2 | 0.58 | 48.0 | 4.19e-01 | 100.0% | 94.3% |
| 5my3A00 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.58 | 47.0 | 3.21e-01 | 98.1% | 23.8% |
| 1v5dA01 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.57 | 51.0 | 3.08e-01 | 100.0% | 28.9% |
| 3lw7A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 46.0 | 3.27e-01 | 90.4% | 78.8% |
| 2mw2A00 | 1.20.1280.40 | Mainly Alpha › Up-down Bundle › Monooxygenase › HHA | 0.57 | 42.0 | 4.03e-01 | 86.5% | 77.6% |
| 3iu0A00 | 3.90.1360.10 | Alpha Beta › Alpha-Beta Complex › Microbial transglutaminase. Chain: a › Protein-glutamine gamma-glutamyltransferase | 0.56 | 45.0 | 2.84e-01 | 100.0% | 15.8% |
| 7p2yd01 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.55 | 42.0 | 3.51e-01 | 86.5% | 65.7% |
| 2oxlA00 | 1.20.5.5260 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.55 | 46.0 | 4.34e-01 | 90.4% | 83.9% |
| 2af0A02 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.55 | 43.0 | 3.83e-01 | 88.5% | 96.2% |
| 2yjgA01 | 3.90.226.30 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › LarA, C-terminal domain | 0.55 | 42.0 | 3.03e-01 | 92.3% | 36.2% |
| 3deeA01 | 1.10.150.690 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063 | 0.54 | 39.0 | 3.39e-01 | 76.9% | 46.5% |
| 1jxhA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.54 | 48.0 | 3.09e-01 | 100.0% | 93.1% |
| 6znjB01 | 3.40.50.10950 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 43.0 | 3.18e-01 | 100.0% | 79.5% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3702727 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.91 | 84.0 | 6.62e-01 | 100.0% | 56.0% |
| 3992442 | 592.7.1.1 ↗ | alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › GIPC1_GH2 | 0.81 | 66.0 | 5.59e-01 | 90.4% | 56.5% |
| 3220510 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.80 | 63.0 | 6.49e-01 | 86.5% | 90.0% |
| 3227146 | 101.1.1.82 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CDH1_2_SANT_HL1 | 0.79 | 71.0 | 5.79e-01 | 100.0% | 54.7% |
| 3617778 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 65.0 | 4.95e-01 | 94.2% | 41.6% |
| 3411735 | 101.1.1.82 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CDH1_2_SANT_HL1 | 0.79 | 70.0 | 5.61e-01 | 100.0% | 52.0% |
| 3730705 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 58.0 | 5.89e-01 | 82.7% | 94.0% |
| 3234027 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.78 | 61.0 | 5.86e-01 | 86.5% | 75.0% |
| 3261482 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.77 | 69.0 | 6.08e-01 | 100.0% | 74.7% |
| 3930259 | 592.7.1.0 ↗ | alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain | 0.77 | 57.0 | 5.13e-01 | 82.7% | 57.3% |
| 3468254 | 592.2.1.0 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like | 0.76 | 62.0 | 5.58e-01 | 94.2% | 65.7% |
| 3218285 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.76 | 65.0 | 5.32e-01 | 100.0% | 52.6% |
| 4927487 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.76 | 63.0 | 5.72e-01 | 98.1% | 77.3% |
| 4345084 | 4973.1.1.0 ↗ | alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core | 0.76 | 67.0 | 5.94e-01 | 100.0% | 69.3% |
| 5044421 | 592.2.1.0 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like | 0.75 | 56.0 | 4.85e-01 | 80.8% | 61.3% |
| 3297949 | 592.7.1.2 ↗ | alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › PWI | 0.75 | 56.0 | 5.26e-01 | 86.5% | 66.2% |
| 3711217 | 101.7.1.0 ↗ | alpha arrays › HTH › DEK-C › DEK-C | 0.74 | 58.0 | 5.37e-01 | 84.6% | 86.2% |
| 3220792 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.74 | 58.0 | 4.97e-01 | 90.4% | 61.1% |
| 4314672 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.74 | 58.0 | 4.68e-01 | 88.5% | 51.4% |
| 4276274 | 198.2.1.1 ↗ | alpha arrays › Saposin-like › Bacteriocin AS-48-related › Bacteriocin AS-48-related › Bacteriocin_IId | 0.74 | 58.0 | 5.43e-01 | 86.5% | 69.2% |
| 3676992 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.74 | 64.0 | 3.92e-01 | 96.2% | 20.3% |
| 4947399 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 59.0 | 4.83e-01 | 88.5% | 78.9% |
| 5030693 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 59.0 | 4.79e-01 | 94.2% | 64.8% |
| 3225250 | 198.1.1.1 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2 | 0.72 | 61.0 | 5.44e-01 | 96.2% | 76.0% |
| 4678981 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 52.0 | 5.29e-01 | 78.8% | 84.0% |
| 4273749 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.71 | 52.0 | 3.41e-01 | 80.8% | 35.3% |
| 4022380 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 57.0 | 4.63e-01 | 94.2% | 49.5% |
| 3899102 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.70 | 59.0 | 3.47e-01 | 100.0% | 37.5% |
| 3574560 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 60.0 | 5.09e-01 | 100.0% | 64.4% |
| 3392763 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 57.0 | 4.95e-01 | 94.2% | 87.1% |
| 3607327 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 54.0 | 5.17e-01 | 86.5% | 95.0% |
| 3406422 | 592.2.1.9 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like › PP1_inhibitor | 0.69 | 52.0 | 4.57e-01 | 86.5% | 79.8% |
| 4966184 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.69 | 55.0 | 4.65e-01 | 94.2% | 88.4% |
| 3964745 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 52.0 | 4.67e-01 | 88.5% | 70.0% |
| 3410177 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 59.0 | 4.81e-01 | 100.0% | 60.0% |
| 3232086 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 57.0 | 4.84e-01 | 100.0% | 63.2% |
| 4436102 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 54.0 | 5.23e-01 | 92.3% | 80.0% |
| 3708809 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 52.0 | 4.93e-01 | 88.5% | 89.2% |
| 3484245 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 58.0 | 4.91e-01 | 100.0% | 68.9% |
| 3584520 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 56.0 | 4.54e-01 | 100.0% | 52.7% |
| 5033981 | 3705.1.1.0 ↗ | alpha arrays › Bacterial chaperone lipoprotein (PulS_OutS) › Bacterial chaperone lipoprotein (PulS_OutS) › Bacterial chaperone lipoprotein (PulS_OutS) | 0.66 | 53.0 | 4.71e-01 | 94.2% | 70.0% |
| 3714293 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.66 | 51.0 | 4.92e-01 | 92.3% | 90.8% |
| 3952621 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.66 | 56.0 | 5.19e-01 | 98.1% | 82.6% |
| 4214506 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.66 | 49.0 | 4.85e-01 | 82.7% | 90.9% |
| 4202529 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.64 | 52.0 | 4.48e-01 | 100.0% | 81.1% |
| 3209226 | 2003.1.2.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase | 0.64 | 57.0 | 3.42e-01 | 98.1% | 15.8% |
| 5077474 | 1030.1.1.0 ↗ | alpha duplicates or obligate multimers › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 | 0.64 | 52.0 | 4.26e-01 | 96.2% | 97.1% |
| 4961862 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 46.0 | 3.71e-01 | 80.8% | 77.1% |
| 4972648 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.63 | 52.0 | 3.29e-01 | 96.2% | 21.4% |
| 5045542 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.62 | 52.0 | 3.59e-01 | 100.0% | 85.0% |
| 4991749 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 52.0 | 3.94e-01 | 100.0% | 83.7% |
| 4946543 | 2004.1.3.3 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR_N | 0.61 | 50.0 | 3.50e-01 | 96.2% | 87.7% |
| 5048562 | 2500.1.1.4 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › DUF711 | 0.61 | 44.0 | 2.63e-01 | 80.8% | 56.0% |
| 3960314 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.61 | 53.0 | 4.13e-01 | 100.0% | 61.7% |
| 3914757 | 592.1.1.7 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain › PF26091 | 0.60 | 51.0 | 4.68e-01 | 98.1% | 78.6% |
| 5026098 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.58 | 47.0 | 3.25e-01 | 96.2% | 27.5% |
| 3522359 | 639.2.1.0 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) | 0.57 | 49.0 | 4.82e-01 | 98.1% | 87.3% |
| 3751351 | 3796.1.1.0 ↗ | alpha arrays › Iron-regulated surface determinant protein H linker domain › Iron-regulated surface determinant protein H linker domain › Iron-regulated surface determinant protein H linker domain | 0.56 | 49.0 | 4.50e-01 | 100.0% | 75.4% |
| 3664055 | 3317.3.1.1 ↗ | alpha arrays › KorB C-terminal domain-like › Helical domain of Rubisco accumulation factor 1 › Helical domain of Rubisco accumulation factor 1 › Raf1_N | 0.55 | 48.0 | 3.57e-01 | 100.0% | 48.9% |
| 3885033 | 133.1.1.1 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF | 0.52 | 42.0 | 3.00e-01 | 96.2% | 27.2% |