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IMGVR_UViG_3300037454_000906-3300037454-Ga0394156_0000018_17460_17750
Arc-VirIMGVR_UViG_3300037454_000906-3300037454-Ga0394156_0000018_17460_17750
Identity
- Kingdom:
- archaea
Quality
82.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-87
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.65 | 35.0 | 3.97e-01 | 71.1% | 69.6% |
| 2o95B00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.63 | 48.0 | 3.65e-01 | 97.4% | 35.2% |
| 4d10F01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.60 | 46.0 | 3.52e-01 | 100.0% | 35.2% |
| 2l6mA00 | 3.30.160.400 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 37.0 | 3.39e-01 | 72.4% | 50.5% |
| 2yh9B00 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.55 | 31.0 | 3.28e-01 | 77.6% | 60.3% |
| 2qrdB01 | 2.20.25.290 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.54 | 29.0 | 3.44e-01 | 73.7% | 100.0% |
| 4h40A01 | 2.60.40.3730 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrillin-like | 0.54 | 46.0 | 3.73e-01 | 100.0% | 69.6% |
| 6tdyD01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.52 | 36.0 | 3.70e-01 | 89.5% | 73.3% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5079075 | 7592.1.1.0 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains | 0.61 | 43.0 | 3.34e-01 | 75.0% | 33.1% |
| 3996923 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.60 | 51.0 | 4.11e-01 | 94.7% | 96.0% |
| 3709649 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.57 | 40.0 | 3.39e-01 | 73.7% | 56.9% |
| 5015538 | 205.1.1.22 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_21 | 0.57 | 39.0 | 3.50e-01 | 73.7% | 78.3% |
| 3789407 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.56 | 48.0 | 3.25e-01 | 97.4% | 35.3% |
| 3286009 | 217.2.1.1 ↗ | a+b complex topology › FAD-binding domain-like › CorC/HlyC domain-like › CorC/HlyC domain-like › CorC_HlyC | 0.56 | 44.0 | 4.19e-01 | 92.1% | 71.6% |
| 3759236 | 223.1.1.77 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Intu_longin_3 | 0.56 | 47.0 | 3.72e-01 | 97.4% | 55.9% |
| 3913066 | 223.2.1.36 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_3 | 0.55 | 46.0 | 3.58e-01 | 96.1% | 50.3% |
| 4029830 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.54 | 45.0 | 3.58e-01 | 92.1% | 63.9% |
| 3689672 | 5.1.3.116 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_KLHDC2_KLHL20_DRC7 | 0.52 | 43.0 | 2.89e-01 | 100.0% | 29.9% |
| 3733035 | 5.1.4.15 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RPE65 | 0.52 | 44.0 | 2.67e-01 | 97.4% | 93.3% |
| 3873711 | 372.1.1.1 ↗ | a+b complex topology › RNase A-like › RNase A-like › RNase A-like › RnaseA | 0.52 | 44.0 | 3.79e-01 | 100.0% | 75.6% |
| 3739112 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.52 | 35.0 | 3.15e-01 | 71.1% | 49.1% |
| 4927673 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 30.0 | 3.04e-01 | 71.1% | 55.0% |
| 3594204 | 209.1.1.11 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › DUF5075 | 0.50 | 41.0 | 3.21e-01 | 96.1% | 71.8% |
| 3713445 | 2008.1.1.77 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NOV_C | 0.50 | 36.0 | 3.07e-01 | 88.2% | 43.0% |
| 3578580 | 2484.1.1.26 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi | 0.50 | 37.0 | 3.11e-01 | 81.6% | 44.1% |