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IMGVR_UViG_3300037454_000906-3300037454-Ga0394156_0000018_209008_211545

Arc-Vir

IMGVR_UViG_3300037454_000906-3300037454-Ga0394156_0000018_209008_211545

Identity

Kingdom:
archaea

Quality

77.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-82
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wrdA00 1.20.58.160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.77 47.0 4.17e-01 76.1% 44.9%
1y6xA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.70 38.0 3.58e-01 84.5% 43.7%
3rkgA02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.61 53.0 4.06e-01 97.2% 91.5%
7shlA02 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.58 42.0 3.57e-01 77.5% 76.2%
4cclA02 3.40.366.30 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › 50S ribosomal protein L16 arginine hydroxylase; Chain A, Domain 2 0.52 44.0 3.40e-01 97.2% 63.7%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3943565 1049.2.1.0 ↗ alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain 0.89 83.0 6.99e-01 100.0% 63.6%
4514735 1049.2.1.4 ↗ alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › Baseplate_J 0.89 79.0 5.59e-01 100.0% 35.3%
3973303 1049.2.1.3 ↗ alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › PF26776 0.87 81.0 6.75e-01 100.0% 61.7%
3342169 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.75 50.0 3.36e-01 95.8% 20.0%
4569675 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.70 55.0 4.84e-01 95.8% 57.1%
4888809 1049.2.1.1 ↗ alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › Gp6-like_1st 0.70 61.0 5.09e-01 100.0% 56.8%
2859100 148.1.1.0 ↗ alpha arrays › Histone-like › Histone-related › Histone 0.69 50.0 4.95e-01 80.3% 73.0%
3213193 148.1.1.15 ↗ alpha arrays › Histone-like › Histone-related › Histone › CENP-X 0.68 51.0 5.03e-01 80.3% 74.7%
4162390 4121.1.1.2 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like 0.64 56.0 3.74e-01 97.2% 65.4%
3168861 604.6.1.2 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › ANTH 0.62 42.0 3.66e-01 91.5% 46.4%
4988487 547.1.1.1 ↗ alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer 0.61 45.0 4.41e-01 80.3% 73.4%
4385509 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.61 33.0 3.12e-01 98.6% 43.5%
3173173 2484.1.1.57 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ydc2-catalyt 0.58 47.0 3.10e-01 88.7% 21.4%
3268340 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.57 42.0 3.42e-01 77.5% 41.5%
D2 high residues 93-159_305-345
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1nc7A00 2.60.290.11 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like 0.54 39.0 3.88e-01 100.0% 71.6%
2ii7H00 2.60.290.11 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like 0.53 37.0 3.82e-01 100.0% 74.5%
1uynX00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.52 43.0 3.23e-01 89.8% 96.4%
1uwwB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 43.0 3.73e-01 100.0% 56.4%
3d82A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 30.0 3.09e-01 84.3% 59.8%
2bv4A00 2.60.120.400 Mainly Beta › Sandwich › Jelly Rolls › Calcium-mediated lectin 0.51 42.0 4.23e-01 100.0% 87.6%
4kghA00 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.50 38.0 3.19e-01 80.6% 85.5%
2vpvA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 30.0 3.17e-01 80.6% 66.0%
5dl5A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.50 35.0 2.42e-01 73.1% 98.3%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1562394 1.1.8.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GlxA 0.69 59.0 5.96e-01 100.0% 92.6%
3287105 5084.1.1.33 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › DUF6004 0.60 42.0 3.65e-01 73.1% 100.0%
3285810 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.59 47.0 3.96e-01 87.0% 99.5%
3360458 11.2.1.17 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › NT-C2 0.56 51.0 4.49e-01 100.0% 94.2%
5075927 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.55 40.0 4.36e-01 100.0% 93.2%
D3 high residues 162-301
PDB
Domain cluster: rep: IMGVR_UViG_3300028797_000097-3300028797-Ga0265301_10000033115__D187-324
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1n67A01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 37.0 3.79e-01 100.0% 56.7%
1rwhA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.65 32.0 3.52e-01 100.0% 56.1%
4b60A01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 36.0 3.66e-01 100.0% 55.9%
1o7dC02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.62 34.0 4.13e-01 100.0% 83.1%
4j3vA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.62 31.0 3.99e-01 100.0% 85.7%
6cl5A01 2.60.40.3940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 35.0 4.02e-01 100.0% 78.4%
2cw5A02 2.40.30.90 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like 0.59 36.0 4.31e-01 98.6% 93.3%
2okmA00 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 38.0 3.83e-01 100.0% 63.0%
4i0wD02 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.58 40.0 4.16e-01 100.0% 75.4%
2f68X02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 39.0 3.70e-01 100.0% 59.3%
3vmnA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.56 40.0 4.01e-01 99.3% 72.5%
3ezjA02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.55 27.0 3.70e-01 93.6% 95.6%
2ww8A02 2.60.40.2110 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 39.0 3.47e-01 100.0% 51.5%
3lnnA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.54 35.0 4.18e-01 100.0% 100.0%
3tu3A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.52 34.0 3.69e-01 97.9% 77.3%
4xotA03 2.40.30.250 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.52 31.0 3.82e-01 100.0% 96.5%
4gf3A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.51 32.0 3.46e-01 97.1% 71.5%
3zugB02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.51 35.0 3.55e-01 99.3% 69.0%
1xkpC00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.51 34.0 3.60e-01 97.9% 76.2%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2003 12.2.1.1 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › Lyase_8_C 0.67 32.0 3.59e-01 100.0% 55.8%
5012887 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 38.0 4.12e-01 100.0% 67.0%
4110679 4287.1.1.1 ↗ beta sandwiches › beta sandwich domain in YacF-like proteins › beta sandwich domain in YacF-like proteins › beta sandwich domain in YacF-like proteins › ZapD 0.67 34.0 4.35e-01 99.3% 85.0%
1848 11.1.5.48 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Big_8 0.65 37.0 3.79e-01 100.0% 56.7%
5038375 4081.1.1.2 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.62 42.0 3.73e-01 100.0% 48.0%
4943639 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 35.0 4.28e-01 100.0% 92.9%
4944190 4081.1.1.7 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I 0.60 43.0 3.65e-01 100.0% 46.2%
3267853 4081.1.1.2 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.59 40.0 3.41e-01 100.0% 42.7%
3885267 4178.1.1.0 ↗ beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain 0.59 34.0 3.48e-01 99.3% 56.5%
4992085 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.55 34.0 4.03e-01 100.0% 95.6%
127 1.1.7.10 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase 0.54 31.0 3.50e-01 100.0% 71.6%
3792868 11.1.5.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF7808 0.54 38.0 4.09e-01 100.0% 83.9%
3860841 4081.1.1.5 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.52 38.0 3.20e-01 100.0% 46.5%
3239995 11.21.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › DUF7808 0.51 36.0 4.13e-01 100.0% 100.0%
5055413 10.20.1.0 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease 0.51 33.0 3.48e-01 100.0% 70.0%
1839958 12.1.1.23 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › hGDE_central 0.51 33.0 3.54e-01 100.0% 75.8%
2581320 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 40.0 4.20e-01 99.3% 93.6%
D4 high residues 358-469_509-554
PDB
D5 high residues 635-825
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wgwA00 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.68 26.0 3.61e-01 78.5% 66.7%
3dfgA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 19.0 3.87e-01 83.8% 100.0%
1vcsA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.65 28.0 3.68e-01 70.7% 71.6%
3onjA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.59 31.0 4.21e-01 78.0% 100.0%
3rr1A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.57 30.0 3.56e-01 88.5% 71.5%
3l5iA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 21.0 3.07e-01 74.3% 71.6%
1zvzA02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.57 28.0 3.43e-01 78.0% 71.0%
1yd0A00 3.40.1440.10 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease 0.57 20.0 2.81e-01 80.1% 60.7%
4kb2A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.56 33.0 4.18e-01 80.6% 100.0%
4hwhE00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.55 28.0 3.84e-01 71.7% 100.0%
4jn7A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 29.0 3.64e-01 90.1% 82.4%
4hdoA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 27.0 3.57e-01 72.8% 95.7%
3pg7A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 29.0 3.63e-01 74.9% 91.8%
1aj3A00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 28.0 3.65e-01 77.5% 100.0%
3f6zB01 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.51 23.0 3.40e-01 70.7% 100.0%
4bfeC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 23.0 2.95e-01 70.2% 72.6%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3228837 109.12.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › C-terminal domain of Ku80 › C-terminal domain of Ku80 0.63 25.0 4.01e-01 86.9% 94.7%
3938097 621.1.1.0 ↗ alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 0.61 32.0 4.04e-01 81.7% 82.6%
4826450 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.59 21.0 3.36e-01 77.0% 86.4%
3106025 4967.1.1.11 ↗ alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › GIIM 0.59 33.0 3.63e-01 88.5% 65.8%
5055960 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.55 28.0 3.54e-01 72.3% 78.3%
3636426 650.1.1.11 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › RPT 0.54 20.0 3.24e-01 99.5% 93.8%
3632939 101.1.9.80 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › YOL029C_N 0.52 22.0 2.99e-01 70.7% 73.0%
3775836 220.1.1.56 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ASK_PH 0.51 31.0 3.78e-01 89.5% 100.0%
4093588 4194.1.1.2 ↗ a+b duplicates or obligate multimers › Prenyltransferase-like › Prenyltransferase-like › Prenyltransferase-like › Trp_DMAT 0.51 38.0 2.98e-01 78.0% 83.2%
3474420 220.1.1.123 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st 0.51 29.0 3.28e-01 72.8% 70.7%
3236195 603.2.1.0 ↗ alpha bundles › STAT-like › STAT › STAT 0.50 38.0 3.98e-01 97.9% 85.7%
3884136 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.50 34.0 3.95e-01 83.8% 97.0%
D6 medium residues 560-619
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2g8lB01 1.10.8.380 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 0.70 60.0 5.87e-01 98.3% 95.5%
3u9rB02 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.70 49.0 3.21e-01 75.0% 18.6%
4dhxB00 1.10.246.140 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › ENY2/SUS1 0.69 50.0 4.38e-01 78.3% 54.9%
3dd9D02 6.10.140.2060 Special › Helix non-globular › Helix Hairpins › 0.67 44.0 4.90e-01 71.7% 100.0%
1cqmA00 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.66 58.0 4.97e-01 100.0% 89.8%
6xasW01 3.90.940.10 Alpha Beta › Alpha-Beta Complex › Eukaryotic RPB6 RNA polymerase subunit › RNA polymerase subunit, RPB6/omega 0.64 46.0 4.99e-01 75.0% 100.0%
8igrI01 2.40.270.10 Mainly Beta › Beta Barrel › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6 › DNA-directed RNA polymerase, subunit 2, domain 6 0.64 48.0 3.47e-01 81.7% 29.0%
1gjsA00 1.10.8.40 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Albumin-binding domain 0.64 42.0 4.09e-01 73.3% 61.5%
2wjwA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 51.0 3.61e-01 91.7% 99.5%
1sg7A00 1.10.1740.70 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › ChaB 0.63 52.0 4.93e-01 95.0% 92.0%
3k6hA01 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.60 45.0 3.32e-01 81.7% 88.0%
1txoB00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.60 50.0 3.47e-01 100.0% 70.8%
4qa9A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 46.0 2.88e-01 93.3% 67.5%
3f2bA05 6.10.50.10 Special › Helix non-globular › Insulin-like, subunit E › 0.58 37.0 4.05e-01 73.3% 83.3%
3deeA01 1.10.150.690 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063 0.57 47.0 4.34e-01 100.0% 79.1%
4x28A01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.57 41.0 3.32e-01 76.7% 55.8%
3lphC00 6.10.140.630 Special › Helix non-globular › Helix Hairpins › 0.55 39.0 4.02e-01 75.0% 93.1%
2co9A00 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.55 41.0 3.47e-01 93.3% 48.0%
2c35A00 1.20.1250.40 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › RNA Polymerase II, Rpb4 subunit 0.52 43.0 3.47e-01 96.7% 89.1%
2fiwA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 42.0 3.25e-01 98.3% 86.3%
2oap101 3.30.450.380 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.50 42.0 2.94e-01 96.7% 48.8%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4957578 3228.1.1.2 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C 0.90 81.0 7.00e-01 100.0% 65.6%
3977755 3228.1.1.2 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C 0.83 74.0 6.55e-01 100.0% 69.4%
4093853 3228.1.1.2 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C 0.81 70.0 6.27e-01 100.0% 68.7%
4565831 3228.1.1.2 ↗ a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C 0.80 71.0 6.21e-01 100.0% 68.9%
3941274 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.72 50.0 4.45e-01 75.0% 51.8%
4127795 307.1.1.2 ↗ a+b two layers › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Peptidase_M15 0.68 47.0 3.18e-01 73.3% 20.6%
4955330 148.1.3.409 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › BrxL_ATPase 0.66 54.0 5.48e-01 90.0% 95.0%
5058952 138.1.1.38 ↗ alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › MutL_C 0.65 52.0 5.24e-01 91.7% 90.0%
4368654 103.4.1.2 ↗ alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › TFIIS_M 0.65 52.0 4.25e-01 91.7% 62.5%
3614578 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.65 54.0 4.88e-01 95.0% 77.6%
4025752 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.61 41.0 2.65e-01 71.7% 13.8%
2323996 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.57 40.0 3.01e-01 95.0% 28.1%
3480389 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.56 42.0 3.89e-01 83.3% 67.5%
4015832 230.1.1.0 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like 0.56 46.0 4.00e-01 100.0% 63.8%
3324517 259.1.1.2 ↗ a+b two layers › Ribosomal protein L31e-like › Ribosomal protein L31e/gp120 outer domain › Ribosomal protein L31e/gp120 outer domain › Ribosomal_L31e 0.53 37.0 3.46e-01 76.7% 100.0%