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IMGVR_UViG_3300037454_000906-3300037454-Ga0394156_0000018_2677_3489
Arc-VirIMGVR_UViG_3300037454_000906-3300037454-Ga0394156_0000018_2677_3489
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 33-50_128-262
Domain cluster:
rep: LC373201.2__BBD52285.1__X__00218__D3-107
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00303.25 best | Thymidylat_synt | 203.9 | 3.60e-60 | 89.5% | 49.1% |
D2
medium
residues 51-127
Domain cluster:
rep: thymidylate_synthase__YP_010087878__Lymphocystis_disease_virus_4__2704413__D55-131
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00303.25 best | Thymidylat_synt | 121.7 | 4.40e-35 | 100.0% | 29.1% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bo7A00 | 3.30.572.10 | Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain | 0.96 | 92.0 | 5.82e-01 | 100.0% | 40.2% |
| 3v8hC00 | 3.30.572.10 | Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain | 0.93 | 88.0 | 5.74e-01 | 100.0% | 42.7% |
| 1bkpA00 | 3.30.572.10 | Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain | 0.86 | 81.0 | 5.33e-01 | 100.0% | 28.4% |
| 1b5eA00 | 3.30.572.10 | Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain | 0.69 | 61.0 | 4.28e-01 | 98.7% | 63.5% |
| 7pbkB02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.54 | 42.0 | 3.56e-01 | 85.7% | 72.6% |
| 1b22A00 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.51 | 31.0 | 3.20e-01 | 84.4% | 64.3% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4664958 | 266.1.1.0 ↗ | a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase | 1.00 | 98.0 | 6.35e-01 | 100.0% | 29.2% |
| 3944795 | 266.1.1.1 ↗ | a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt | 0.98 | 94.0 | 5.80e-01 | 100.0% | 31.3% |
| 5059575 | 266.1.1.1 ↗ | a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt | 0.97 | 93.0 | 5.97e-01 | 100.0% | 27.6% |
| 4108234 | 266.1.1.1 ↗ | a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt | 0.97 | 93.0 | 5.84e-01 | 100.0% | 40.9% |
| 4937005 | 266.1.1.1 ↗ | a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt | 0.94 | 91.0 | 5.66e-01 | 100.0% | 31.3% |
| 4228846 | 266.1.1.1 ↗ | a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt | 0.94 | 89.0 | 5.63e-01 | 100.0% | 38.1% |
| 3479792 | 266.1.1.0 ↗ | a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase | 0.93 | 89.0 | 5.67e-01 | 100.0% | 31.3% |
| 4225236 | 266.1.1.1 ↗ | a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt | 0.93 | 89.0 | 5.76e-01 | 100.0% | 30.4% |
| 3164619 | 266.1.1.1 ↗ | a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt | 0.92 | 87.0 | 5.67e-01 | 100.0% | 31.4% |
| 3203076 | 266.1.1.1 ↗ | a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt | 0.92 | 88.0 | 5.52e-01 | 100.0% | 29.5% |
| 1900468 | 266.1.1.1 ↗ | a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt | 0.87 | 82.0 | 5.38e-01 | 100.0% | 28.3% |
| 1900473 | 266.1.1.1 ↗ | a+b two layers › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylate synthase/dCMP hydroxymethylase › Thymidylat_synt | 0.68 | 61.0 | 4.24e-01 | 98.7% | 62.2% |
| 5010519 | 101.1.2.210 ↗ | alpha arrays › HTH › HTH › winged helix domain › CggR_N | 0.53 | 41.0 | 3.87e-01 | 87.0% | 80.0% |
| 4456623 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.52 | 38.0 | 3.02e-01 | 81.8% | 41.6% |
| 4589278 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.52 | 40.0 | 3.69e-01 | 85.7% | 78.1% |
| 3273019 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 41.0 | 3.71e-01 | 92.2% | 70.0% |