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IMGVR_UViG_3300037454_000906-3300037454-Ga0394156_0000018_27379_27843
Arc-VirIMGVR_UViG_3300037454_000906-3300037454-Ga0394156_0000018_27379_27843
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-118
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p4tA00 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 35.0 | 4.36e-01 | 100.0% | 81.0% |
| 2e5wA01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.59 | 34.0 | 4.16e-01 | 95.9% | 96.4% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.59 | 34.0 | 4.04e-01 | 100.0% | 85.7% |
| 3pieC05 | 2.170.260.40 | Mainly Beta › Beta Complex › paz domain › | 0.59 | 53.0 | 4.43e-01 | 100.0% | 65.3% |
| 2k57A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 30.0 | 3.65e-01 | 100.0% | 87.3% |
| 1w1hD00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 39.0 | 3.54e-01 | 73.5% | 60.6% |
| 7k7jA02 | 2.60.40.1770 | Mainly Beta › Sandwich › Immunoglobulin-like › ephrin a2 ectodomain | 0.55 | 32.0 | 3.73e-01 | 92.9% | 88.7% |
| 3it8D01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.54 | 40.0 | 3.38e-01 | 80.6% | 72.2% |
| 8bs9A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.50 | 35.0 | 2.47e-01 | 71.4% | 34.0% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3247995 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.74 | 36.0 | 4.16e-01 | 100.0% | 64.3% |
| 3586469 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.71 | 38.0 | 4.08e-01 | 100.0% | 60.0% |
| 3660358 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 34.0 | 4.21e-01 | 100.0% | 78.3% |
| 4030063 | 243.4.1.0 ↗ | a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like | 0.63 | 45.0 | 3.56e-01 | 75.5% | 60.9% |
| 3313682 | 708.1.1.2 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › WRKY | 0.60 | 39.0 | 4.57e-01 | 94.9% | 98.5% |
| 3740923 | 4.1.1.107 ↗ | beta barrels › SH3 › SH3 › SH3 › XRN1_D1 | 0.58 | 52.0 | 4.29e-01 | 100.0% | 58.9% |
| 3722114 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.57 | 41.0 | 3.56e-01 | 75.5% | 91.6% |
| 4271974 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.57 | 31.0 | 3.67e-01 | 100.0% | 79.7% |
| 3648015 | 9.1.1.21 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Cyclin_D1_bind | 0.56 | 50.0 | 4.21e-01 | 100.0% | 92.9% |
| 4584941 | 243.3.1.7 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Xylo_C | 0.56 | 49.0 | 4.38e-01 | 100.0% | 84.8% |
| 3990361 | 304.4.1.52 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF7153 | 0.55 | 48.0 | 4.10e-01 | 100.0% | 100.0% |
| 3412126 | 243.3.1.53 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › CHGN | 0.55 | 47.0 | 4.71e-01 | 93.9% | 98.0% |
| 3399368 | 9.14.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › DUF7042 | 0.55 | 45.0 | 4.04e-01 | 100.0% | 64.4% |
| 4057824 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.54 | 47.0 | 4.32e-01 | 98.0% | 76.6% |
| 2507560 | 243.3.1.1 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin | 0.54 | 41.0 | 4.18e-01 | 82.7% | 90.5% |
| 4880797 | 60.1.1.2 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › Med25 | 0.53 | 45.0 | 4.09e-01 | 94.9% | 82.4% |
| 3867192 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.53 | 44.0 | 4.05e-01 | 93.9% | 83.3% |
| 1821014 | 4.1.1.70 ↗ | beta barrels › SH3 › SH3 › SH3 › Tsr0524-like | 0.53 | 31.0 | 3.61e-01 | 71.4% | 87.5% |
| 3420648 | 1.1.1.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_C, TAXi_N | 0.51 | 42.0 | 2.79e-01 | 90.8% | 45.9% |