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IMGVR_UViG_3300037454_000906-3300037454-Ga0394156_0000018_46899_47129
Arc-VirIMGVR_UViG_3300037454_000906-3300037454-Ga0394156_0000018_46899_47129
Identity
- Kingdom:
- archaea
Quality
89.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-69
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nn4A00 | 1.10.287.760 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like | 0.80 | 62.0 | 5.74e-01 | 80.0% | 67.7% |
| 3ed5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.80 | 60.0 | 4.97e-01 | 80.0% | 48.8% |
| 4qlxB00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.76 | 68.0 | 4.42e-01 | 100.0% | 42.4% |
| 6ig5A01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.75 | 66.0 | 4.75e-01 | 98.0% | 43.5% |
| 1vq8P03 | 1.10.1200.60 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › | 0.71 | 59.0 | 5.72e-01 | 94.0% | 81.8% |
| 3qnmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.70 | 54.0 | 4.45e-01 | 86.0% | 46.7% |
| 1vfrA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.67 | 56.0 | 3.74e-01 | 100.0% | 25.8% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.65 | 49.0 | 4.25e-01 | 86.0% | 51.9% |
| 1wekF01 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 44.0 | 3.00e-01 | 80.0% | 79.2% |
| 8bauA01 | 1.10.357.40 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › YbiA-like | 0.58 | 47.0 | 3.27e-01 | 94.0% | 39.2% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3286824 | 632.2.1.17 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › DUF1707 | 0.81 | 60.0 | 6.35e-01 | 80.0% | 86.7% |
| 3277930 | 632.2.1.17 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › DUF1707 | 0.80 | 62.0 | 6.27e-01 | 84.0% | 82.0% |
| 3590548 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.77 | 61.0 | 3.86e-01 | 86.0% | 18.7% |
| 4169323 | 4952.1.1.1 ↗ | alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › Lyase_1 | 0.73 | 63.0 | 4.58e-01 | 96.0% | 48.1% |
| 3431353 | 1128.1.1.10 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › VIN3_C | 0.70 | 60.0 | 5.30e-01 | 92.0% | 68.6% |
| 5083674 | 304.136.1.0 ↗ | a+b two layers › Alpha-beta plaits › Oligo-peptide binding protein (OPPA) insertion domain › Oligo-peptide binding protein (OPPA) insertion domain | 0.69 | 52.0 | 3.46e-01 | 80.0% | 37.5% |
| 4954975 | 2484.1.1.32 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_C | 0.68 | 50.0 | 3.20e-01 | 78.0% | 82.1% |
| 3828426 | 2007.15.1.15 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › Lysine_decarbox | 0.68 | 48.0 | 3.67e-01 | 70.0% | 33.3% |
| 3939360 | 601.20.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipophorin-III › Apolipophorin-III | 0.65 | 54.0 | 3.56e-01 | 94.0% | 82.3% |
| 3624011 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.64 | 55.0 | 3.80e-01 | 96.0% | 61.2% |