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IMGVR_UViG_3300037454_000906-3300037454-Ga0394156_0000018_66805_67074

Arc-Vir

IMGVR_UViG_3300037454_000906-3300037454-Ga0394156_0000018_66805_67074

Quality

62.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-61
PDB
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3askA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 48.0 4.78e-01 70.0% 64.5%
5ygbA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 49.0 4.47e-01 73.3% 55.0%
2d3aA01 3.10.20.70 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain 0.70 62.0 5.20e-01 100.0% 74.3%
4ld6A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 49.0 3.91e-01 76.7% 41.0%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 42.0 4.30e-01 70.0% 64.4%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 44.0 4.38e-01 71.7% 64.5%
6k93A00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.67 53.0 3.55e-01 88.3% 40.6%
1hpgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.66 46.0 3.86e-01 73.3% 46.5%
2kr7A02 2.40.10.330 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.65 47.0 4.82e-01 88.3% 80.7%
4dt4A02 2.40.10.330 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.64 46.0 4.70e-01 90.0% 82.5%
2c61A00 3.40.50.12240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.62 43.0 2.65e-01 88.3% 10.4%
2gbmA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.62 56.0 5.05e-01 100.0% 96.3%
3lxfA00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.62 56.0 4.63e-01 100.0% 97.1%
3vqiD03 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.62 55.0 5.11e-01 100.0% 97.3%
2v1yA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.61 55.0 4.79e-01 100.0% 93.3%
3lnnA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.61 52.0 4.58e-01 100.0% 76.3%
2bw2A01 3.10.20.420 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Bypass-of-forespore C, N-terminal domain 0.61 47.0 4.93e-01 100.0% 92.7%
2j3xA01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.60 46.0 3.23e-01 86.7% 53.7%
1krhA01 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.60 53.0 4.47e-01 100.0% 90.3%
8a8gA01 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.60 50.0 3.94e-01 96.7% 85.0%
2l89A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 41.0 3.43e-01 71.7% 43.5%
1ttnA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.60 53.0 4.96e-01 100.0% 94.6%
1wh3A01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.59 53.0 5.06e-01 100.0% 98.6%
3rt3B01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.59 52.0 4.88e-01 100.0% 96.0%
2gfuA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 44.0 3.50e-01 83.3% 88.1%
1gg3A02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.59 52.0 4.81e-01 100.0% 97.4%
3pvlA02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.58 51.0 4.42e-01 100.0% 93.8%
1wghA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.58 52.0 4.70e-01 100.0% 96.4%
6djwA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.58 51.0 4.86e-01 100.0% 97.2%
2dzkA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.58 51.0 4.75e-01 100.0% 97.4%
7sbiB01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.58 50.0 4.70e-01 100.0% 98.7%
7pyvC02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.57 50.0 4.79e-01 98.3% 98.6%
1wiaA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.57 51.0 4.89e-01 100.0% 97.1%
2mlbA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.57 51.0 4.63e-01 100.0% 88.6%
2b3yA05 3.20.19.10 Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 0.56 40.0 2.83e-01 80.0% 93.6%
1c1yB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.56 48.0 4.46e-01 100.0% 97.4%
2f91A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 46.0 3.91e-01 100.0% 65.5%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.55 49.0 4.09e-01 100.0% 64.4%
2al3A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.55 48.0 4.45e-01 100.0% 92.1%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 42.0 4.20e-01 90.0% 84.6%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 37.0 4.00e-01 96.7% 89.6%
1ntpA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 45.0 3.91e-01 100.0% 65.0%
2lrwA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.54 47.0 4.36e-01 100.0% 89.7%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 39.0 3.75e-01 86.7% 65.8%
1wgrA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.54 47.0 4.27e-01 100.0% 98.8%
4ifdG01 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.54 36.0 3.67e-01 100.0% 70.5%
5os9A00 2.40.330.10 Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain 0.54 47.0 3.84e-01 100.0% 56.5%
1f39A00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.54 39.0 3.37e-01 91.7% 47.5%
4hntA04 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.53 40.0 3.46e-01 83.3% 81.2%
1dx5M02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 43.0 3.65e-01 100.0% 67.2%
2mm0A00 2.10.70.110 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.53 37.0 3.64e-01 96.7% 70.3%
2qdfA03 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.52 45.0 4.22e-01 100.0% 92.2%
2kvzA00 3.10.20.320 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Putative peptidoglycan bound protein (lpxtg motif) 0.52 45.0 4.05e-01 100.0% 72.9%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.51 38.0 3.96e-01 90.0% 94.4%
3tw6D02 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.51 39.0 3.64e-01 83.3% 69.7%
4zy7A00 3.30.1050.40 Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › 0.50 34.0 2.87e-01 71.7% 72.3%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5033600 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 48.0 5.19e-01 100.0% 75.5%
4565837 4.11.1.2 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.78 53.0 4.45e-01 75.0% 44.2%
3715285 4.11.1.2 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.77 51.0 3.73e-01 73.3% 26.5%
4300895 4.11.1.6 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › PF31032 0.77 52.0 3.88e-01 73.3% 30.0%
3176265 4.11.1.1 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.77 53.0 3.83e-01 73.3% 27.7%
3568329 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 49.0 4.99e-01 71.7% 66.7%
3926921 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.76 69.0 4.87e-01 100.0% 47.1%
3688443 2.1.1.87 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RPA43_OB 0.76 52.0 4.19e-01 71.7% 80.9%
3615426 4.11.1.1 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.76 52.0 3.82e-01 73.3% 28.7%
3252916 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.75 51.0 4.23e-01 70.0% 79.0%
3607438 4.11.1.2 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.75 53.0 3.67e-01 73.3% 58.9%
3507146 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.75 50.0 4.43e-01 73.3% 48.2%
3826141 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 51.0 4.44e-01 73.3% 64.4%
4097843 4.11.1.6 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › PF31032 0.73 51.0 3.70e-01 73.3% 39.4%
3666818 2.1.1.138 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › ATG11 0.73 50.0 4.52e-01 71.7% 92.5%
3598093 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.72 52.0 3.58e-01 76.7% 61.5%
3451173 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 48.0 4.18e-01 71.7% 46.7%
2157301 4.1.1.78 beta barrels › SH3 › SH3 › SH3 › TTD 0.71 48.0 4.51e-01 70.0% 61.6%
5037211 239.1.1.6 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 0.71 58.0 5.66e-01 100.0% 83.1%
3585538 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.70 46.0 3.87e-01 71.7% 40.0%
4970425 239.1.1.0 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.69 57.0 5.57e-01 100.0% 84.6%
3938484 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 48.0 3.81e-01 73.3% 53.3%
3937478 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.68 49.0 4.03e-01 76.7% 61.8%
4017905 2.1.1.177 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 0.68 47.0 4.18e-01 71.7% 100.0%
5028424 239.1.1.2 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_S6e 0.68 58.0 4.41e-01 96.7% 69.7%
5079927 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 59.0 5.20e-01 100.0% 68.9%
3974369 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.67 58.0 5.26e-01 100.0% 74.1%
3886084 237.1.1.2 a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART 0.67 54.0 3.64e-01 88.3% 44.4%
3707121 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 46.0 4.27e-01 71.7% 58.7%
3253266 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 47.0 3.94e-01 76.7% 49.5%
3617704 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.65 54.0 5.59e-01 100.0% 98.2%
4259249 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.65 54.0 4.82e-01 100.0% 74.7%
3717836 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.64 55.0 4.47e-01 98.3% 96.7%
3219409 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 44.0 3.86e-01 71.7% 48.9%
3516095 221.1.1.36 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › FERM_N 0.64 57.0 4.81e-01 100.0% 86.0%
5037173 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 52.0 4.51e-01 100.0% 60.0%
3701490 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.62 55.0 5.15e-01 100.0% 94.7%
3917387 221.1.1.36 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › FERM_N 0.62 55.0 5.02e-01 100.0% 96.2%
3659859 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.61 56.0 3.71e-01 100.0% 43.2%
3678623 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.61 54.0 5.04e-01 100.0% 93.3%
3487658 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.61 54.0 4.82e-01 100.0% 92.9%
5019852 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.60 45.0 3.09e-01 80.0% 59.0%
22055 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.60 45.0 3.15e-01 80.0% 64.9%
3994460 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.60 54.0 4.04e-01 100.0% 48.3%
3476615 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 52.0 4.69e-01 100.0% 71.2%
3629956 221.1.1.40 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › TUG-UBL1 0.60 54.0 4.44e-01 100.0% 66.7%
3857587 221.1.1.36 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › FERM_N 0.59 53.0 4.28e-01 100.0% 66.1%
3768116 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.59 46.0 3.24e-01 90.0% 28.8%
4947239 1.1.7.140 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF87 0.59 48.0 4.25e-01 100.0% 73.0%
3801804 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.58 51.0 4.52e-01 100.0% 85.6%
3464188 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.58 52.0 4.81e-01 100.0% 96.0%
5016260 56.2.1.1 beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT 0.57 46.0 4.70e-01 100.0% 94.9%
3998386 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.56 42.0 3.46e-01 100.0% 42.6%
3964508 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.56 38.0 3.59e-01 70.0% 96.0%
3625963 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.56 42.0 3.71e-01 85.0% 62.1%
4411726 4.6.1.6 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.55 47.0 4.64e-01 100.0% 92.3%