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IMGVR_UViG_3300037454_000906-3300037454-Ga0394156_0000018_95770_96501
Arc-VirIMGVR_UViG_3300037454_000906-3300037454-Ga0394156_0000018_95770_96501
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 75-174
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jpyX00 | 2.10.90.10 | Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines | 0.68 | 33.0 | 3.18e-01 | 84.0% | 40.2% |
| 5u1xA02 | 2.60.490.10 | Mainly Beta › Sandwich › atp-gated p2x4 ion channel fold › atp-gated p2x4 ion channel domain | 0.55 | 47.0 | 3.53e-01 | 99.0% | 93.1% |
| 1novA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 46.0 | 3.24e-01 | 93.0% | 77.3% |
| 5wl1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 33.0 | 3.33e-01 | 96.0% | 61.4% |
| 1f8vC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 43.0 | 3.05e-01 | 92.0% | 46.0% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5052397 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 44.0 | 3.85e-01 | 84.0% | 81.3% |
| 5074082 | 11.1.1.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N | 0.56 | 42.0 | 3.79e-01 | 82.0% | 95.2% |
| 4023255 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 41.0 | 3.44e-01 | 81.0% | 80.0% |
| 329607 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.54 | 28.0 | 3.47e-01 | 98.0% | 87.3% |
| 2099165 | 10.2.1.22 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Peptidase_A6 | 0.52 | 43.0 | 2.98e-01 | 92.0% | 40.3% |
| 2772633 | 71.1.1.15 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › UCP033729 | 0.52 | 31.0 | 2.67e-01 | 81.0% | 34.1% |
| 3966796 | 512.1.1.3 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st, PmbA_TldD_2nd | 0.51 | 40.0 | 3.17e-01 | 95.0% | 39.1% |
D2
medium
residues 1-74_207-233
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a3wA01 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.71 | 30.0 | 2.58e-01 | 86.1% | 25.8% |
| 5vazA02 | 3.40.1360.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › | 0.65 | 28.0 | 2.55e-01 | 92.1% | 30.5% |
| 7d3uC01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.62 | 43.0 | 4.27e-01 | 89.1% | 68.2% |
| 3bb8A01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.61 | 35.0 | 2.48e-01 | 78.2% | 19.4% |
| 3tbiB02 | 6.10.140.1670 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 51.0 | 5.16e-01 | 95.0% | 100.0% |
| 5gujA02 | 3.40.1360.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › | 0.56 | 25.0 | 2.38e-01 | 75.2% | 32.8% |
| 1gxlA01 | 1.20.1060.20 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › | 0.54 | 37.0 | 3.59e-01 | 71.3% | 100.0% |
| 2qmxA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.54 | 22.0 | 2.33e-01 | 71.3% | 35.6% |
| 1yf2A02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.54 | 44.0 | 4.41e-01 | 94.1% | 100.0% |
| 4basA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 26.0 | 2.19e-01 | 99.0% | 24.4% |
| 2au3A03 | 3.40.1360.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › | 0.53 | 25.0 | 2.33e-01 | 76.2% | 33.9% |
| 1hciA04 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 37.0 | 3.61e-01 | 80.2% | 65.8% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3475539 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.72 | 49.0 | 4.34e-01 | 94.1% | 50.0% |
| 4480472 | 621.1.1.0 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0.68 | 44.0 | 4.40e-01 | 86.1% | 63.8% |
| 3409714 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.64 | 35.0 | 3.52e-01 | 93.1% | 54.0% |
| 3593268 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.61 | 49.0 | 5.18e-01 | 94.1% | 97.8% |
| 4342809 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.61 | 53.0 | 4.92e-01 | 94.1% | 83.2% |
| 4441825 | 2006.1.3.6 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 | 0.59 | 24.0 | 2.29e-01 | 88.1% | 28.8% |
| 3837934 | 2006.1.3.6 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 | 0.58 | 26.0 | 2.43e-01 | 76.2% | 33.6% |
| 1407540 | 2006.1.3.6 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 | 0.57 | 25.0 | 2.35e-01 | 75.2% | 31.7% |
| 3911608 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.57 | 33.0 | 3.45e-01 | 94.1% | 62.2% |
| 3285475 | 2006.1.3.7 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4 | 0.56 | 26.0 | 2.40e-01 | 80.2% | 31.1% |
| 3288497 | 3567.1.1.18 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › DUF3566 | 0.54 | 45.0 | 4.72e-01 | 95.0% | 97.8% |
| 4191035 | 2006.1.3.6 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 | 0.54 | 25.0 | 2.34e-01 | 76.2% | 33.6% |
| 4939764 | 2484.1.1.339 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › acVLRF1 | 0.50 | 35.0 | 3.23e-01 | 83.2% | 56.2% |
| 3710532 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.50 | 40.0 | 3.98e-01 | 89.1% | 99.0% |