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IMGVR_UViG_3300037455_001444-3300037455-Ga0394157_0035183_1_1746
Arc-VirIMGVR_UViG_3300037455_001444-3300037455-Ga0394157_0035183_1_1746
Identity
- Kingdom:
- archaea
Quality
90.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-115_376-436
Domain cluster:
rep: qh_7_scaffold_1_prodigal-single.1__X__X__00442__D1-105_215-240_326-375
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1noyA01 | 3.30.342.10 | Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 | 0.64 | 48.0 | 5.44e-01 | 85.2% | 100.0% |
| 1d5aA01 | 3.30.342.10 | Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 | 0.63 | 52.0 | 5.64e-01 | 89.8% | 100.0% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 18.0 | 2.85e-01 | 76.7% | 67.7% |
| 1dz1A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 20.0 | 2.85e-01 | 80.1% | 77.1% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 11143 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.88 | 75.0 | 5.65e-01 | 88.1% | 99.7% |
| 4502019 | 2484.1.1.197 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1, DNA_pol_B_exo2 | 0.82 | 71.0 | 5.21e-01 | 89.8% | 100.0% |
| 5058881 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.79 | 71.0 | 5.58e-01 | 94.3% | 96.5% |
| 4988803 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.78 | 72.0 | 5.38e-01 | 97.2% | 99.5% |
| 5044376 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.78 | 67.0 | 5.39e-01 | 90.9% | 100.0% |
| 3917161 | 2484.1.1.153 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 | 0.77 | 68.0 | 5.21e-01 | 94.9% | 94.0% |
| 4022145 | 2484.1.1.153 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 | 0.76 | 70.0 | 4.71e-01 | 98.3% | 62.6% |
| 4977731 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.76 | 67.0 | 5.34e-01 | 93.8% | 97.3% |
| 4675814 | 2484.1.1.153 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 | 0.76 | 68.0 | 5.16e-01 | 96.6% | 97.0% |
| 3705694 | 2484.1.1.153 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 | 0.75 | 59.0 | 4.86e-01 | 81.8% | 99.3% |
| 3801169 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.74 | 59.0 | 4.77e-01 | 82.4% | 96.6% |
| 3194014 | 2484.1.1.153 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 | 0.73 | 57.0 | 4.51e-01 | 81.8% | 96.3% |
| 3166916 | 2484.1.1.153 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 | 0.72 | 57.0 | 4.64e-01 | 83.0% | 100.0% |
| 4139730 | 2484.1.1.153 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 | 0.72 | 56.0 | 4.42e-01 | 81.8% | 96.7% |
| 5040509 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.71 | 63.0 | 5.01e-01 | 94.9% | 99.7% |
| 4982339 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.71 | 63.0 | 5.12e-01 | 94.3% | 96.5% |
| 3720761 | 2484.1.1.153 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 | 0.71 | 56.0 | 4.56e-01 | 82.4% | 99.7% |
| 3924200 | 2484.1.1.153 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 | 0.70 | 56.0 | 4.63e-01 | 82.4% | 100.0% |
| 3997615 | 2484.1.1.153 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 | 0.70 | 55.0 | 4.58e-01 | 81.8% | 100.0% |
| 4649119 | 2484.1.1.153 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 | 0.70 | 53.0 | 4.55e-01 | 78.4% | 100.0% |
| 3331569 | 375.1.1.31 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 | 0.67 | 20.0 | 3.68e-01 | 76.1% | 85.5% |
| 2485685 | 5.5.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like | 0.67 | 17.0 | 3.59e-01 | 93.8% | 90.7% |
| 3814126 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.65 | 24.0 | 3.38e-01 | 77.3% | 68.2% |
| 4263405 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.64 | 19.0 | 3.31e-01 | 90.3% | 78.2% |
| 4949765 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 53.0 | 5.49e-01 | 90.3% | 100.0% |
| 3252808 | 1170.1.2.0 ↗ | beta barrels › IL8-related › IL8-related › chemokine-related domain in glycoprotein L (gL) | 0.60 | 21.0 | 3.30e-01 | 84.7% | 77.1% |
| 4939488 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.60 | 53.0 | 4.38e-01 | 92.6% | 100.0% |
| 1177137 | 220.1.1.43 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SIN1_PH | 0.60 | 21.0 | 2.84e-01 | 81.8% | 57.0% |
| 3483363 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 17.0 | 2.64e-01 | 81.8% | 60.0% |
| 3227102 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 23.0 | 3.45e-01 | 72.7% | 97.1% |
D2
medium
residues 437-511
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1epwA01 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.59 | 48.0 | 3.07e-01 | 94.7% | 68.0% |
| 4lqqB00 | 1.20.140.30 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › MOB kinase activator | 0.57 | 40.0 | 3.16e-01 | 72.0% | 42.5% |
| 2af0A02 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.56 | 41.0 | 4.07e-01 | 78.7% | 92.5% |
| 2ex3B01 | 6.10.250.960 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.55 | 31.0 | 3.11e-01 | 100.0% | 53.9% |
| 2xz2A00 | 1.20.960.50 | Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A › Cleavage stimulation factor subunit 1, dimerisation domain | 0.55 | 34.0 | 3.59e-01 | 81.3% | 69.7% |
| 1mukA02 | 3.90.1850.10 | Alpha Beta › Alpha-Beta Complex › RNA-directed RNA polymerase lambda-3 › RNA-directed RNA polymerase lambda-3 | 0.55 | 44.0 | 2.71e-01 | 89.3% | 38.4% |
| 1xtfA00 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.54 | 41.0 | 2.64e-01 | 85.3% | 43.8% |
| 1gwiA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.53 | 46.0 | 2.94e-01 | 100.0% | 26.4% |
| 1zvwA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.52 | 34.0 | 3.64e-01 | 74.7% | 77.3% |
| 1w36C06 | 1.10.10.990 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.52 | 36.0 | 3.69e-01 | 73.3% | 77.8% |
| 8bypX01 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.51 | 41.0 | 2.74e-01 | 98.7% | 47.4% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3962675 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.64 | 43.0 | 4.22e-01 | 77.3% | 63.7% |
| 4029998 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.61 | 42.0 | 3.82e-01 | 73.3% | 79.1% |
| 4306177 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.59 | 50.0 | 3.26e-01 | 97.3% | 80.8% |
| 2324036 | 109.4.1.219 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TINF2_N | 0.58 | 43.0 | 3.19e-01 | 78.7% | 95.8% |
| 4429847 | 3675.1.1.1 ↗ | a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › GyrB_insert | 0.57 | 40.0 | 3.14e-01 | 73.3% | 93.9% |
| 3415464 | 196.1.1.1 ↗ | alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › RGS | 0.56 | 48.0 | 3.95e-01 | 97.3% | 65.7% |
| 4028015 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.55 | 37.0 | 3.90e-01 | 72.0% | 78.5% |
| 5071604 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.52 | 40.0 | 2.75e-01 | 82.7% | 33.8% |