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IMGVR_UViG_3300037528_000297-3300037528-Ga0334897_004847_8535_8915

Arc-Vir

IMGVR_UViG_3300037528_000297-3300037528-Ga0334897_004847_8535_8915

Quality

84.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-118
PDB
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5tqbB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.81 52.0 3.61e-01 94.0% 22.6%
4it4A02 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.76 53.0 5.93e-01 97.4% 92.3%
3rfyA02 1.20.120.290 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle 0.72 50.0 5.21e-01 94.0% 76.6%
3kavA00 1.20.1270.360 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.72 45.0 4.78e-01 92.3% 71.6%
2yevA03 1.20.120.80 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle 0.70 58.0 4.85e-01 95.7% 54.9%
1w99A01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.68 59.0 5.09e-01 100.0% 61.8%
6adqG01 1.20.120.80 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle 0.67 56.0 4.83e-01 96.6% 57.9%
6t0bc02 1.20.120.80 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle 0.67 56.0 4.64e-01 99.1% 53.9%
1o5hA00 1.20.120.680 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle 0.66 53.0 4.38e-01 94.0% 49.5%
4od8D00 6.10.140.1880 Special › Helix non-globular › Helix Hairpins › 0.65 31.0 4.26e-01 89.7% 100.0%
1sumB02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.61 47.0 4.76e-01 98.3% 82.2%
3u9jA00 1.20.120.520 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like 0.60 45.0 4.11e-01 95.7% 59.2%
4mt4A00 1.20.1600.10 Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.59 53.0 3.58e-01 100.0% 52.1%
6a3kA00 1.20.120.10 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 0.59 49.0 4.75e-01 94.9% 79.8%
3u64A00 1.25.40.920 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TRAP transporter T-component 0.58 50.0 3.71e-01 90.6% 43.5%
3io1A02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 31.0 3.15e-01 88.0% 51.7%
3rkgA02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.57 53.0 4.67e-01 100.0% 98.2%
5aj3Q00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 25.0 2.58e-01 81.2% 40.4%
1nu7D01 1.20.120.750 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Staphylcoagulase, helix bundle domain 1 0.57 43.0 4.08e-01 77.8% 67.4%
4ewtA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 31.0 3.13e-01 85.5% 52.2%
1wcrA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.56 45.0 4.80e-01 98.3% 98.1%
4i4cB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 51.0 3.43e-01 97.4% 35.4%
4x28A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.55 43.0 3.90e-01 99.1% 61.5%
1hciA04 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 45.0 4.59e-01 100.0% 93.0%
1xdxA01 3.30.1140.40 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Tctex-1 0.55 28.0 3.05e-01 88.0% 57.0%
1ylmA00 1.20.120.580 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › bsu32300-like 0.55 47.0 4.38e-01 96.6% 75.4%
3nivC02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.55 40.0 3.96e-01 88.0% 72.6%
4kn7D01 1.10.132.30 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain 0.54 42.0 4.09e-01 84.6% 82.0%
2b1eA04 1.20.1280.170 Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70 0.54 39.0 3.88e-01 93.2% 70.9%
6w08A01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.53 43.0 3.07e-01 86.3% 97.7%
1bf5A01 1.20.1050.20 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain 0.53 46.0 4.12e-01 95.7% 79.2%
5j1hA01 1.20.58.1060 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 48.0 4.12e-01 99.1% 81.9%
1wn0A00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.53 40.0 3.90e-01 80.3% 96.9%
1w27A02 1.20.200.10 Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) 0.52 40.0 2.89e-01 82.1% 34.3%
3anwB00 1.20.58.2050 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 46.0 4.11e-01 100.0% 70.4%
1jogA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.52 45.0 4.29e-01 93.2% 83.7%
1cg2A02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 28.0 2.93e-01 88.9% 53.6%
1siqA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.51 41.0 3.76e-01 100.0% 65.2%
3lsjA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.50 34.0 3.08e-01 84.6% 51.6%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3917802 109.4.1.1880 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_DENND3 0.86 47.0 4.55e-01 94.0% 49.2%
3436028 109.4.1.218 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SNAP 0.83 54.0 4.30e-01 100.0% 36.7%
3632510 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.81 54.0 5.83e-01 94.9% 79.0%
3433168 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.78 47.0 4.00e-01 91.5% 38.4%
3585180 109.4.1.1316 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Suf, HAT_PRP39_N, HAT_PRP39_C 0.73 46.0 2.81e-01 100.0% 11.3%
3681372 109.4.1.1555 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_7, TPR_19 0.72 48.0 3.61e-01 91.5% 29.6%
3899945 3937.1.1.0 alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 0.69 64.0 4.42e-01 100.0% 53.2%
3535566 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.68 52.0 5.16e-01 94.9% 76.0%
3213413 3937.1.1.2 alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.68 61.0 4.28e-01 100.0% 54.7%
3711742 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 49.0 4.96e-01 94.0% 76.5%
3684566 192.15.1.85 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › DUF3755 0.67 45.0 5.40e-01 91.5% 100.0%
3603448 3291.1.1.49 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › NFACT_N 0.66 51.0 4.50e-01 80.3% 80.6%
3581555 633.33.1.1 alpha bundles › Bromodomain-like › Rogdi › Rogdi › Rogdi_lz 0.66 60.0 4.52e-01 100.0% 55.8%
3225919 633.23.1.14 alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_3 0.66 55.0 4.70e-01 93.2% 57.2%
3441715 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.66 53.0 5.46e-01 94.0% 90.9%
3660731 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.65 49.0 4.22e-01 77.8% 79.4%
4975983 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.64 61.0 5.59e-01 100.0% 92.4%
3378334 604.12.1.65 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT_ATG1 0.64 60.0 5.74e-01 100.0% 91.9%
3574069 604.12.1.62 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DuoxA 0.64 55.0 5.36e-01 100.0% 84.8%
3700727 601.29.1.0 alpha bundles › Four-helical up-and-down bundle › TM1646-like › TM1646-like 0.63 52.0 4.98e-01 93.2% 75.6%
3249527 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.63 53.0 5.01e-01 95.7% 76.3%
5083022 3281.1.1.0 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related 0.62 53.0 3.35e-01 94.9% 19.3%
3785653 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 51.0 4.35e-01 91.5% 57.1%
3186931 603.1.1.5 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N 0.62 54.0 4.53e-01 98.3% 57.9%
3508392 604.6.1.32 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › Mito_morph_reg 0.61 52.0 5.16e-01 94.9% 90.3%
3768971 192.29.1.11 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › FerA 0.61 44.0 4.50e-01 88.9% 79.1%
3181445 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 53.0 3.82e-01 100.0% 34.9%
3912433 603.1.1.5 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N 0.60 54.0 5.21e-01 100.0% 85.9%
3185802 7015.1.1.0 alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain 0.60 45.0 4.30e-01 96.6% 68.1%
3982740 5086.1.1.190 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › OEP 0.60 44.0 3.66e-01 76.1% 98.5%
4272772 3281.1.1.3 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M,Proton_antipo_N,Proton_antipo_C 0.59 55.0 3.32e-01 100.0% 72.4%
4674581 3281.1.1.4 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M,Proton_antipo_N,NADH5_C 0.59 50.0 3.04e-01 91.5% 15.7%
4315272 3281.1.1.3 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M,Proton_antipo_N,Proton_antipo_C 0.59 55.0 3.30e-01 100.0% 74.7%
3897356 603.1.1.17 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE 0.57 52.0 4.29e-01 100.0% 73.3%
3334910 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 27.0 2.66e-01 79.5% 39.2%
2863941 3281.1.1.1 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.57 49.0 3.12e-01 94.9% 19.1%
5048142 3281.1.1.1 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.57 50.0 3.06e-01 94.9% 17.1%
3620170 7015.1.1.1 alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC 0.56 47.0 4.36e-01 100.0% 71.3%
4931014 3281.1.1.1 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.56 47.0 3.09e-01 98.3% 21.5%
3634960 603.1.1.5 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N 0.56 48.0 4.96e-01 100.0% 100.0%
4520610 5085.1.1.1 a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP 0.56 49.0 3.44e-01 100.0% 59.5%
3386604 304.25.1.1 a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer 0.56 31.0 3.14e-01 88.0% 53.9%
3728168 109.4.1.681 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2 0.56 47.0 3.35e-01 95.7% 30.5%
3733226 3883.1.1.1 alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf 0.55 50.0 4.34e-01 98.3% 73.7%
4278285 5061.1.1.1 alpha complex topology › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › SecY 0.55 41.0 2.82e-01 80.3% 25.9%
3610349 1189.1.1.0 alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor 0.55 49.0 3.45e-01 99.1% 77.9%
4139987 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 48.0 3.25e-01 94.9% 29.0%
4474711 3747.1.1.2 a+b two layers › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flg_bb_rod,Flg_bbr_C 0.55 43.0 4.57e-01 82.9% 100.0%
3238213 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.54 47.0 4.85e-01 96.6% 99.1%
3550154 109.4.1.1493 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Zw10_middle, ZW10_C, ZW10_C2 0.54 50.0 3.07e-01 100.0% 17.9%
4995128 3281.1.1.1 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.53 47.0 3.14e-01 100.0% 64.9%
3193307 192.29.1.23 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF6536 0.53 48.0 3.41e-01 100.0% 83.9%
3245545 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.53 46.0 4.71e-01 99.1% 99.1%
3640464 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 46.0 3.13e-01 94.9% 30.0%
3555180 5001.1.1.5 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 0.53 46.0 3.37e-01 94.0% 65.6%
3483174 5052.1.1.1 alpha complex topology › Proton glutamate symport protein › Proton glutamate symport protein › Proton glutamate symport protein › SDF 0.52 47.0 3.14e-01 97.4% 78.0%
4047429 3281.1.1.3 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M,Proton_antipo_N,Proton_antipo_C 0.52 46.0 2.85e-01 96.6% 69.3%
3644241 310.2.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.52 46.0 4.51e-01 98.3% 95.2%
4356551 3281.1.1.1 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.51 46.0 3.02e-01 100.0% 51.1%
3495045 109.4.1.373 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COG4_m 0.50 45.0 3.35e-01 99.1% 58.7%
3912477 5001.1.1.5 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 0.50 41.0 3.01e-01 100.0% 32.2%