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IMGVR_UViG_3300037579_000125-3300037579-Ga0411629_00328_171_1856
Arc-VirIMGVR_UViG_3300037579_000125-3300037579-Ga0411629_00328_171_1856
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-104
Domain cluster:
rep: IMGVR_UViG_3300028326_000299-3300028326-Ga0268263_1000016106__D7-97
D2
high
residues 129-328
Domain cluster:
rep: IMGVR_UViG_3300029881_000391-3300029881-Ga0245307_1000082147__D118-318
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4a8eA02 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.82 | 68.0 | 7.16e-01 | 100.0% | 94.4% |
| 3uxuA00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.77 | 58.0 | 6.49e-01 | 100.0% | 97.5% |
| 5jk0B01 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.77 | 61.0 | 6.52e-01 | 88.0% | 93.6% |
| 1ae9A00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.74 | 60.0 | 6.53e-01 | 96.0% | 98.8% |
| 1f44A01 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.73 | 62.0 | 6.33e-01 | 88.0% | 90.2% |
| 2a3vA02 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.71 | 61.0 | 5.98e-01 | 88.0% | 91.0% |
| 1floC02 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.70 | 67.0 | 6.07e-01 | 100.0% | 79.8% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4954640 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.96 | 91.0 | 9.21e-01 | 100.0% | 98.5% |
| 4954527 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.94 | 90.0 | 8.69e-01 | 100.0% | 90.0% |
| 4637388 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.89 | 63.0 | 6.82e-01 | 88.0% | 83.5% |
| 4979786 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.88 | 51.0 | 6.69e-01 | 75.0% | 97.5% |
| 4973226 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.88 | 52.0 | 6.77e-01 | 76.5% | 99.2% |
| 4930303 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.87 | 50.0 | 6.60e-01 | 74.5% | 98.3% |
| 4992939 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.86 | 71.0 | 7.73e-01 | 99.0% | 100.0% |
| 4949702 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.86 | 47.0 | 6.17e-01 | 70.5% | 91.7% |
| 5016981 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.85 | 50.0 | 6.48e-01 | 75.0% | 97.5% |
| 5072041 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.85 | 51.0 | 6.36e-01 | 74.5% | 92.3% |
| 4966682 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.84 | 48.0 | 6.47e-01 | 72.5% | 100.0% |
| 5028306 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.84 | 65.0 | 6.87e-01 | 88.0% | 87.8% |
| 5002702 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.84 | 64.0 | 6.61e-01 | 88.5% | 82.1% |
| 5057283 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.84 | 52.0 | 6.32e-01 | 74.0% | 91.9% |
| 4940211 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.83 | 64.0 | 6.93e-01 | 88.0% | 91.8% |
| 5030401 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.83 | 52.0 | 6.33e-01 | 74.0% | 92.6% |
| 5073434 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.83 | 79.0 | 7.95e-01 | 100.0% | 98.0% |
| 5058465 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.83 | 48.0 | 6.09e-01 | 73.0% | 92.0% |
| 5054951 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.83 | 50.0 | 6.24e-01 | 73.5% | 93.1% |
| 4932090 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.83 | 51.0 | 6.50e-01 | 74.0% | 99.2% |
| 4994277 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.82 | 62.0 | 6.59e-01 | 88.0% | 85.6% |
| 5059725 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.82 | 61.0 | 6.47e-01 | 88.0% | 84.4% |
| 4975762 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.82 | 49.0 | 6.23e-01 | 70.5% | 96.0% |
| 5030307 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.82 | 50.0 | 6.31e-01 | 75.0% | 97.6% |
| 5000880 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.82 | 61.0 | 6.40e-01 | 88.5% | 83.9% |
| 4940128 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.82 | 51.0 | 6.47e-01 | 72.5% | 100.0% |
| 5035582 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 47.0 | 6.19e-01 | 73.5% | 100.0% |
| 4933965 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 49.0 | 6.25e-01 | 70.0% | 96.8% |
| 4998614 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 79.0 | 7.73e-01 | 100.0% | 99.5% |
| 5058518 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 73.0 | 7.42e-01 | 100.0% | 95.4% |
| 5041911 | 101.1.8.8 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integr_3 | 0.81 | 63.0 | 6.90e-01 | 100.0% | 96.4% |
| 5061203 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 63.0 | 6.46e-01 | 88.5% | 83.7% |
| 5003452 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 52.0 | 6.48e-01 | 74.5% | 100.0% |
| 4966027 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.81 | 61.0 | 6.36e-01 | 88.0% | 83.7% |
| 4475168 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.80 | 64.0 | 6.49e-01 | 88.0% | 83.1% |
| 4964228 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.80 | 50.0 | 6.10e-01 | 73.5% | 93.3% |
| 4997941 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.80 | 77.0 | 7.58e-01 | 100.0% | 95.2% |
| 5031467 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.80 | 73.0 | 7.32e-01 | 100.0% | 95.5% |
| 4969226 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.79 | 53.0 | 6.48e-01 | 75.5% | 100.0% |
| 4999495 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.79 | 69.0 | 7.28e-01 | 100.0% | 100.0% |
| 4961948 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.79 | 48.0 | 6.14e-01 | 73.0% | 100.0% |
| 5018485 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.79 | 57.0 | 6.21e-01 | 73.5% | 94.7% |
| 4965640 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.78 | 75.0 | 7.06e-01 | 99.0% | 95.2% |
| 4071300 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.78 | 51.0 | 6.30e-01 | 74.5% | 99.3% |
| 5008693 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.76 | 73.0 | 7.22e-01 | 100.0% | 95.7% |
| 4964439 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.75 | 65.0 | 6.30e-01 | 88.5% | 87.0% |
| 4961786 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.73 | 51.0 | 5.91e-01 | 75.0% | 95.3% |
| 4253165 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.72 | 47.0 | 5.55e-01 | 73.5% | 92.9% |
| 5076857 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.72 | 60.0 | 6.45e-01 | 98.0% | 98.9% |
| 4934137 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.71 | 52.0 | 5.86e-01 | 73.5% | 96.1% |
| 4409595 | 101.1.8.4 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Flp_C | 0.71 | 67.0 | 5.84e-01 | 100.0% | 76.9% |
| 5011490 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.70 | 49.0 | 5.62e-01 | 75.0% | 94.0% |
| 4940634 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.70 | 48.0 | 5.61e-01 | 74.5% | 96.6% |
| 5027566 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 24.0 | 3.42e-01 | 74.0% | 100.0% |
D3
medium
residues 410-489
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2z15A00 | 3.90.640.90 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › Anti-proliferative protein, N-terminal domain | 0.74 | 54.0 | 4.69e-01 | 76.2% | 63.0% |
| 2w9zA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.71 | 55.0 | 4.60e-01 | 82.5% | 51.1% |
| 1c9bA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.70 | 50.0 | 4.68e-01 | 75.0% | 62.9% |
| 4ag6A02 | 1.10.8.730 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.68 | 53.0 | 4.79e-01 | 85.0% | 68.2% |
| 4qicC01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.67 | 49.0 | 4.25e-01 | 77.5% | 53.6% |
| 2z4sA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.67 | 45.0 | 4.70e-01 | 76.2% | 76.4% |
| 2lyiA01 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.66 | 49.0 | 4.04e-01 | 82.5% | 43.2% |
| 4bbrM00 | 1.10.472.170 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.66 | 48.0 | 3.63e-01 | 85.0% | 32.1% |
| 2mqaA00 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.65 | 47.0 | 4.08e-01 | 76.2% | 51.2% |
| 4ex6A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.64 | 35.0 | 3.82e-01 | 72.5% | 62.7% |
| 3cxbA03 | 1.10.1740.30 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain | 0.64 | 49.0 | 4.97e-01 | 82.5% | 85.2% |
| 2pkeA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.63 | 44.0 | 4.45e-01 | 72.5% | 74.4% |
| 2g8lB01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.62 | 43.0 | 4.62e-01 | 72.5% | 91.0% |
| 3f75P00 | 1.10.287.2250 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.62 | 46.0 | 4.78e-01 | 80.0% | 90.7% |
| 5xs2B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.62 | 49.0 | 4.20e-01 | 87.5% | 87.1% |
| 2o7gA00 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.62 | 45.0 | 4.46e-01 | 80.0% | 75.0% |
| 3lynB00 | 1.20.150.10 | Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein | 0.61 | 53.0 | 4.67e-01 | 98.8% | 82.3% |
| 1zp2A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.61 | 51.0 | 4.56e-01 | 92.5% | 97.3% |
| 6fakA02 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.60 | 44.0 | 4.41e-01 | 83.7% | 76.5% |
| 7wd3A04 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.59 | 45.0 | 4.63e-01 | 82.5% | 83.3% |
| 3chtA00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.59 | 44.0 | 3.00e-01 | 80.0% | 73.8% |
| 1hlvA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.59 | 36.0 | 3.99e-01 | 98.8% | 80.0% |
| 3k1rA01 | 1.20.1160.20 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › | 0.58 | 35.0 | 3.57e-01 | 73.8% | 59.3% |
| 1eg3A02 | 6.10.140.70 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 34.0 | 4.20e-01 | 77.5% | 98.0% |
| 3sykA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.57 | 46.0 | 4.51e-01 | 90.0% | 85.6% |
| 1ifwA00 | 1.10.1900.10 | Mainly Alpha › Orthogonal Bundle › c-terminal domain of poly(a) binding protein › c-terminal domain of poly(a) binding protein | 0.57 | 44.0 | 4.25e-01 | 88.7% | 73.9% |
| 1r6bX03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.57 | 46.0 | 4.56e-01 | 93.8% | 84.1% |
| 1x42A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.56 | 40.0 | 4.01e-01 | 76.2% | 78.3% |
| 1uaaA02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.56 | 36.0 | 3.77e-01 | 75.0% | 70.3% |
| 4fzlA01 | 1.10.150.790 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.56 | 43.0 | 4.25e-01 | 88.7% | 78.2% |
| 1ng6A01 | 1.10.1510.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical Protein Yqey; Chain: A; domain1 › Uncharacterised protein YqeY/AIM41, N-terminal domain | 0.55 | 42.0 | 4.04e-01 | 81.2% | 89.0% |
| 7tm7B01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.55 | 42.0 | 2.67e-01 | 83.7% | 84.4% |
| 2kiwA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.55 | 41.0 | 4.04e-01 | 83.7% | 74.4% |
| 5egwA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.54 | 47.0 | 3.09e-01 | 100.0% | 55.9% |
| 4dq5B00 | 1.10.530.50 | Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40 | 0.54 | 46.0 | 3.73e-01 | 97.5% | 91.3% |
| 2oznB01 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.53 | 36.0 | 3.65e-01 | 70.0% | 91.3% |
| 2c42A06 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.53 | 39.0 | 2.54e-01 | 80.0% | 91.7% |
| 3fy6A01 | 3.30.2210.10 | Alpha Beta › 2-Layer Sandwich › Integron cassette protein fold › Integron cassette protein superfamily | 0.52 | 36.0 | 3.30e-01 | 71.2% | 80.4% |
| 6mh4A03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.52 | 40.0 | 4.02e-01 | 90.0% | 87.3% |
| 2zxqA06 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.52 | 37.0 | 3.99e-01 | 73.8% | 93.9% |
| 3bvxA02 | 1.20.1270.50 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain | 0.50 | 38.0 | 3.44e-01 | 81.2% | 78.4% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3655226 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.76 | 56.0 | 4.67e-01 | 77.5% | 71.9% |
| 5001160 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.72 | 53.0 | 4.54e-01 | 78.8% | 81.5% |
| 5001612 | 148.1.3.409 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › BrxL_ATPase | 0.71 | 52.0 | 5.22e-01 | 81.2% | 77.5% |
| 3571483 | 60.1.1.16 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › MTBP_C | 0.70 | 56.0 | 5.69e-01 | 86.3% | 93.7% |
| 5030446 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.70 | 50.0 | 4.98e-01 | 76.2% | 81.2% |
| 3588797 | 4084.1.1.0 ↗ | alpha bundles › ChaB-like › ChaB-like › ChaB-like | 0.69 | 52.0 | 5.63e-01 | 92.5% | 100.0% |
| 4973086 | 103.5.1.0 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like | 0.69 | 46.0 | 5.27e-01 | 75.0% | 100.0% |
| 4030134 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.68 | 50.0 | 4.22e-01 | 77.5% | 74.1% |
| 4982983 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.68 | 49.0 | 4.65e-01 | 81.2% | 64.2% |
| 3648390 | 103.2.1.3 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › PF28345 | 0.67 | 48.0 | 4.60e-01 | 73.8% | 77.8% |
| 3394467 | 142.3.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Mitochondrial morphogenesis protein Sld7 C-terminal domain › Mitochondrial morphogenesis protein Sld7 C-terminal domain | 0.67 | 54.0 | 5.23e-01 | 87.5% | 85.6% |
| 61904 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.66 | 50.0 | 4.96e-01 | 82.5% | 86.0% |
| 5003875 | 4009.1.1.1 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom | 0.66 | 45.0 | 4.93e-01 | 71.2% | 92.3% |
| 4952935 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.66 | 45.0 | 4.86e-01 | 71.2% | 87.7% |
| 3932277 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.66 | 58.0 | 4.15e-01 | 100.0% | 69.6% |
| 5073287 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.65 | 49.0 | 3.86e-01 | 81.2% | 62.9% |
| 4969272 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.65 | 48.0 | 4.26e-01 | 80.0% | 85.8% |
| 4999074 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.64 | 47.0 | 4.81e-01 | 76.2% | 82.7% |
| 3742618 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.64 | 45.0 | 4.10e-01 | 73.8% | 54.6% |
| 3570012 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.64 | 45.0 | 4.50e-01 | 75.0% | 72.5% |
| 5019927 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 43.0 | 4.04e-01 | 82.5% | 57.1% |
| 3471931 | 327.11.2.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_6 | 0.62 | 45.0 | 3.75e-01 | 77.5% | 83.3% |
| 5034808 | 4009.1.1.1 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom | 0.62 | 44.0 | 4.70e-01 | 75.0% | 87.1% |
| 5030767 | 103.5.1.0 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like | 0.62 | 44.0 | 4.84e-01 | 76.2% | 100.0% |
| 3179815 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 43.0 | 4.43e-01 | 98.8% | 77.3% |
| 4927193 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.61 | 44.0 | 4.06e-01 | 76.2% | 59.0% |
| 3802484 | 192.8.1.388 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Mt_ATP_synt | 0.59 | 43.0 | 4.21e-01 | 77.5% | 73.3% |
| 4386119 | 102.1.1.42 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNAseD_HRDC_C | 0.59 | 38.0 | 4.09e-01 | 76.2% | 75.7% |
| 3335814 | 181.1.1.13 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › Mt_ATP_synt | 0.59 | 43.0 | 4.17e-01 | 77.5% | 73.3% |
| 3642632 | 1008.1.1.4 ↗ | alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › Mt_ATP_synt | 0.58 | 41.0 | 3.66e-01 | 75.0% | 55.0% |
| 3788953 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.58 | 44.0 | 4.25e-01 | 80.0% | 94.4% |
| 4032129 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.57 | 42.0 | 4.47e-01 | 80.0% | 100.0% |
| 5077964 | 3355.1.1.41 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › DUF401 | 0.56 | 43.0 | 2.81e-01 | 82.5% | 50.8% |
| 4032062 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.56 | 41.0 | 3.74e-01 | 77.5% | 83.6% |
| 3432872 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.56 | 49.0 | 3.02e-01 | 98.8% | 58.6% |
| 3347336 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.56 | 40.0 | 3.85e-01 | 77.5% | 100.0% |
| 1401902 | 162.1.1.1 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD | 0.54 | 41.0 | 3.73e-01 | 83.7% | 93.8% |
| 3519127 | 4979.2.1.1 ↗ | alpha arrays › C-terminal domain of Hypothetical protein MPN330-like › XRN2-binding domain (XTBD) › XRN2-binding domain (XTBD) › XTBD | 0.54 | 44.0 | 4.47e-01 | 90.0% | 91.3% |
| 3553833 | 5086.1.1.102 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › PTHB1_hp | 0.52 | 39.0 | 3.00e-01 | 80.0% | 93.2% |
| 3396066 | 109.4.1.583 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DNA_pol_phi | 0.51 | 46.0 | 2.81e-01 | 100.0% | 31.0% |
| 4024704 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.51 | 39.0 | 3.34e-01 | 81.2% | 81.5% |
| 5007277 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.51 | 36.0 | 3.56e-01 | 73.8% | 87.1% |
| 3624024 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.51 | 42.0 | 3.30e-01 | 92.5% | 81.7% |
| 4434717 | 206.1.3.15 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Lant_dehydr_N | 0.51 | 37.0 | 2.32e-01 | 80.0% | 63.9% |
D4
medium
residues 495-560
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4griA04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.69 | 51.0 | 5.55e-01 | 95.5% | 100.0% |
| 3hx3A01 | 1.10.8.20 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p | 0.68 | 57.0 | 5.70e-01 | 100.0% | 92.5% |
| 8d3mA02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.66 | 56.0 | 3.91e-01 | 100.0% | 47.5% |
| 7cosB02 | 1.10.1140.10 | Mainly Alpha › Orthogonal Bundle › Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 › Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3 | 0.65 | 47.0 | 4.50e-01 | 75.8% | 100.0% |
| 6pmiF01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.65 | 57.0 | 5.36e-01 | 100.0% | 85.0% |
| 1wy9A00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.64 | 55.0 | 4.71e-01 | 100.0% | 92.8% |
| 2v6zM00 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.64 | 52.0 | 5.02e-01 | 95.5% | 81.3% |
| 3rc3A01 | 1.10.1740.140 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.64 | 53.0 | 4.72e-01 | 100.0% | 76.7% |
| 6bmeA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.63 | 55.0 | 4.42e-01 | 97.0% | 85.0% |
| 3a06B03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.62 | 52.0 | 4.86e-01 | 100.0% | 81.8% |
| 3iieB03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.62 | 52.0 | 4.89e-01 | 100.0% | 81.2% |
| 1rp3A01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.61 | 52.0 | 4.90e-01 | 100.0% | 81.2% |
| 2vm6A00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.61 | 47.0 | 3.73e-01 | 86.4% | 98.6% |
| 3vkgA09 | 1.20.920.30 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.61 | 51.0 | 4.04e-01 | 97.0% | 55.6% |
| 6ldiF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 49.0 | 4.49e-01 | 100.0% | 67.7% |
| 6rzqA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.59 | 46.0 | 4.33e-01 | 100.0% | 70.6% |
| 3v76A03 | 1.10.8.260 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › HI0933 insert domain-like | 0.58 | 39.0 | 4.04e-01 | 92.4% | 75.4% |
| 1sxjA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.58 | 52.0 | 5.07e-01 | 100.0% | 94.4% |
| 2cruA01 | 1.10.8.140 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PDCD5, DNA-binding domain | 0.57 | 46.0 | 4.44e-01 | 100.0% | 79.2% |
| 2vk9A04 | 1.10.274.80 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › | 0.56 | 49.0 | 4.23e-01 | 98.5% | 99.0% |
| 4cc9B00 | 1.20.5.4730 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.55 | 40.0 | 3.65e-01 | 83.3% | 54.1% |
| 1t11A02 | 1.10.3120.10 | Mainly Alpha › Orthogonal Bundle › Trigger factor, domain 2 › Trigger factor, C-terminal domain | 0.54 | 48.0 | 3.59e-01 | 100.0% | 65.1% |
| 2m6uA00 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.53 | 42.0 | 4.00e-01 | 90.9% | 87.8% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3651501 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.74 | 61.0 | 6.16e-01 | 92.4% | 96.9% |
| 3430911 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.74 | 64.0 | 6.06e-01 | 100.0% | 90.0% |
| 4864447 | 4275.1.1.2 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Phage_Mu_Gp36 | 0.72 | 60.0 | 4.98e-01 | 92.4% | 67.2% |
| 3788414 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.72 | 61.0 | 5.64e-01 | 100.0% | 82.2% |
| 3469007 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.70 | 61.0 | 5.66e-01 | 100.0% | 89.4% |
| 3246383 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.70 | 60.0 | 5.99e-01 | 100.0% | 95.7% |
| 3659207 | 142.1.1.22 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › SCAF11-like_C | 0.70 | 61.0 | 5.53e-01 | 100.0% | 85.6% |
| 3494941 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.69 | 61.0 | 6.20e-01 | 95.5% | 100.0% |
| 3214242 | 148.1.3.9 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Dpoe2NT | 0.69 | 57.0 | 5.55e-01 | 97.0% | 82.7% |
| 3614578 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.68 | 60.0 | 5.53e-01 | 100.0% | 77.6% |
| 3389471 | 148.1.3.9 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Dpoe2NT | 0.67 | 53.0 | 5.23e-01 | 92.4% | 84.3% |
| 3207847 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.66 | 56.0 | 5.24e-01 | 98.5% | 82.4% |
| 3190824 | 166.1.1.0 ↗ | alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C | 0.66 | 57.0 | 5.50e-01 | 100.0% | 96.0% |
| 4017306 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.66 | 56.0 | 5.34e-01 | 100.0% | 90.0% |
| 3584804 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.65 | 56.0 | 4.90e-01 | 100.0% | 64.8% |
| 4993272 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.65 | 48.0 | 5.03e-01 | 92.4% | 88.3% |
| 3264693 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.65 | 55.0 | 5.41e-01 | 100.0% | 89.2% |
| 4573573 | 166.1.1.1 ↗ | alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C | 0.64 | 55.0 | 5.07e-01 | 100.0% | 75.6% |
| 60261 | 166.1.1.0 ↗ | alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C | 0.63 | 53.0 | 4.82e-01 | 100.0% | 74.7% |
| 3226769 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.63 | 47.0 | 4.69e-01 | 84.8% | 78.6% |
| 4076702 | 166.1.1.1 ↗ | alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C | 0.63 | 53.0 | 4.75e-01 | 100.0% | 73.0% |
| 3524655 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.62 | 51.0 | 4.06e-01 | 100.0% | 43.6% |
| 4512923 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.61 | 51.0 | 4.77e-01 | 98.5% | 74.1% |
| 3684651 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.61 | 51.0 | 4.79e-01 | 98.5% | 81.2% |
| 3404489 | 101.1.1.21 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 | 0.60 | 52.0 | 4.41e-01 | 95.5% | 79.1% |
| 3476412 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.60 | 42.0 | 4.23e-01 | 75.8% | 75.4% |
| 4954771 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.59 | 50.0 | 3.82e-01 | 100.0% | 81.8% |
| 4392785 | 5059.1.1.9 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › Sugar_transport | 0.58 | 47.0 | 3.20e-01 | 95.5% | 71.1% |
| 4130802 | 181.1.1.1 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N | 0.57 | 46.0 | 4.33e-01 | 100.0% | 74.1% |