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IMGVR_UViG_3300037614_000407-3300037614-Ga0401887_000600_40_2013

Arc-Vir

IMGVR_UViG_3300037614_000407-3300037614-Ga0401887_000600_40_2013

Quality

90.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 422-650
PDB
Domain cluster: representative
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1cvrA02 3.40.50.1460 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.71 63.0 6.29e-01 100.0% 90.5%
3kcnB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.70 37.0 4.73e-01 88.6% 86.1%
2ohhA02 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.67 43.0 5.25e-01 85.6% 100.0%
1bmtA02 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.63 38.0 4.57e-01 88.2% 87.3%
1pzxB01 3.40.50.10440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 0.62 34.0 4.50e-01 90.8% 97.5%
3zm6A03 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.61 34.0 4.11e-01 84.3% 81.5%
1ig3A02 3.40.50.10240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin pyrophosphokinase, catalytic domain 0.60 30.0 3.59e-01 86.5% 68.7%
2gt1A02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.59 38.0 4.47e-01 87.8% 90.6%
7jt8I02 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.57 32.0 3.93e-01 82.5% 84.7%
3pp8A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 39.0 4.34e-01 97.4% 90.2%
2ov8A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 33.0 3.82e-01 85.2% 81.7%
1y8aA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.54 38.0 4.34e-01 91.7% 98.2%
2piaA02 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.54 29.0 3.81e-01 82.5% 96.7%
5ze7A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.53 33.0 3.89e-01 88.2% 89.0%
2p9jB00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.53 36.0 4.27e-01 92.1% 98.8%
2eklA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 38.0 4.17e-01 97.4% 89.0%
1k1eD00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.52 35.0 4.05e-01 90.4% 91.8%
4hgnB00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.52 36.0 4.16e-01 91.7% 97.0%
1xmxA01 3.40.50.10770 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) 0.52 32.0 3.90e-01 91.7% 96.5%
3mmzC00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.52 36.0 4.20e-01 92.6% 98.8%
3e8mA00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.52 35.0 4.08e-01 90.0% 95.1%
4navA00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.52 36.0 4.01e-01 92.1% 89.0%
3ewiB00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.52 34.0 4.04e-01 89.1% 96.2%
1hkuA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 39.0 4.20e-01 97.4% 91.2%
5tx7A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 38.0 4.12e-01 96.9% 90.0%
6xy9A01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 42.0 3.87e-01 86.5% 90.0%
1j4aA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 39.0 4.19e-01 97.4% 91.3%
2y6uA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 42.0 3.68e-01 86.9% 82.8%
1xdwA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 39.0 4.20e-01 98.3% 91.4%
3qitB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 41.0 3.88e-01 85.6% 91.2%
1u2eA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 41.0 3.84e-01 85.6% 87.4%
4i62A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.50 30.0 3.64e-01 95.6% 91.7%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5033254 7575.1.1.0 a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like 0.97 91.0 8.47e-01 95.6% 81.1%
5055088 7575.1.1.2 a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C25 0.87 74.0 7.44e-01 94.3% 87.0%
4971066 7575.1.1.0 a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like 0.87 78.0 7.60e-01 93.4% 85.7%
5047116 7575.1.1.0 a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like 0.85 78.0 7.49e-01 94.3% 85.5%
5058947 7575.1.1.0 a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like 0.81 75.0 6.79e-01 95.6% 87.8%
5042220 7575.1.1.0 a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like 0.71 53.0 5.44e-01 91.3% 79.1%
4954128 2007.2.1.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_1 0.67 44.0 5.29e-01 86.9% 99.3%
4032407 2010.1.1.3 a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › EIIA-man 0.66 36.0 4.81e-01 93.9% 100.0%
5033029 7575.1.1.2 a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C25 0.65 59.0 5.61e-01 94.8% 92.0%
5075613 7575.1.1.0 a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like 0.65 54.0 5.59e-01 92.1% 92.5%
5023514 3979.1.1.0 a+b four layers › Mre11 nuclease C-terminal domain › Mre11 nuclease C-terminal domain › Mre11 nuclease C-terminal domain 0.64 19.0 3.71e-01 75.1% 98.3%
3662290 2007.1.3.28 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Glyco_transf_61 0.63 41.0 4.62e-01 89.5% 83.1%
4235164 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.61 33.0 4.46e-01 82.1% 100.0%
4950952 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.59 34.0 4.12e-01 84.7% 86.0%
5007927 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 30.0 3.87e-01 86.9% 88.7%
4243555 7514.1.1.0 a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain 0.56 29.0 3.86e-01 77.7% 95.7%
5005835 2007.1.14.7 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D 0.55 30.0 3.81e-01 85.6% 88.9%
3600945 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.54 35.0 4.05e-01 88.2% 90.0%
5000290 2003.1.1.37 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 2-Hacid_dh_C 0.54 39.0 4.32e-01 97.4% 92.2%
5000532 2004.1.1.19 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.53 45.0 4.71e-01 91.7% 98.5%
3391283 7579.1.1.6 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.53 43.0 4.07e-01 85.2% 92.5%
4336164 2484.1.1.194 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve, rve_3 0.53 29.0 3.20e-01 76.0% 64.4%
4220780 2004.1.1.73 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.53 37.0 4.17e-01 85.2% 93.1%
3896439 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.52 36.0 4.10e-01 90.4% 91.4%
5035900 2004.1.1.73 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.52 38.0 4.30e-01 86.5% 98.8%
3783387 2003.1.1.159 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 2-Hacid_dh_C, F420_oxidored 0.52 39.0 4.23e-01 98.3% 90.3%
390104 2006.1.1.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.52 36.0 4.13e-01 92.6% 96.4%
169351 2006.1.1.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.52 35.0 4.08e-01 90.0% 95.1%
3964359 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.51 36.0 4.03e-01 93.0% 91.0%
3823409 7579.1.1.92 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1, Abhydrolase_6 0.51 42.0 3.81e-01 86.9% 80.6%
3388307 2006.1.1.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.51 34.0 4.00e-01 90.4% 96.2%
2458474 2003.1.1.37 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › 2-Hacid_dh_C 0.50 38.0 4.10e-01 97.4% 90.4%
4930132 2006.1.1.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.50 34.0 3.98e-01 90.8% 100.0%
D2 medium residues 1-47_105-119
PDB
Domain cluster: representative
D3 medium residues 48-104_120-148
PDB
Domain cluster: representative
CATH (74)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3afgA03 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.87 69.0 6.45e-01 97.7% 69.6%
3jqwC00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.83 64.0 5.65e-01 98.8% 57.9%
1nqjB00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.80 62.0 5.58e-01 97.7% 61.4%
5ikuA01 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.79 61.0 5.74e-01 97.7% 67.3%
1wmdA02 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.73 66.0 5.92e-01 97.7% 76.9%
1pm4A00 2.60.120.510 Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm 0.73 61.0 5.41e-01 97.7% 65.0%
4h8wC02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.72 49.0 5.18e-01 88.4% 80.0%
2vovA00 2.60.120.1220 Mainly Beta › Sandwich › Jelly Rolls › 0.70 64.0 4.35e-01 100.0% 66.2%
1cidA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.70 47.0 5.18e-01 91.9% 84.5%
7o0eA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.68 50.0 5.10e-01 96.5% 80.7%
6mw4A01 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.67 60.0 5.18e-01 97.7% 75.4%
2luwA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.66 51.0 4.91e-01 97.7% 71.3%
3rj2X00 2.60.120.1150 Mainly Beta › Sandwich › Jelly Rolls › 0.66 51.0 4.49e-01 96.5% 54.9%
4i0wD02 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.65 58.0 4.99e-01 96.5% 75.4%
6tr4A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 54.0 4.69e-01 97.7% 59.5%
1tg7A05 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 51.0 4.06e-01 97.7% 42.0%
3wqbA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 56.0 4.53e-01 98.8% 59.6%
4d8mA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 55.0 4.43e-01 97.7% 50.6%
2lw3A00 2.60.40.2880 Mainly Beta › Sandwich › Immunoglobulin-like › MmpS1-5, C-terminal soluble domain 0.61 39.0 3.87e-01 81.4% 61.1%
4xvhA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.61 46.0 4.32e-01 97.7% 66.4%
4lplA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 51.0 4.43e-01 97.7% 60.6%
1hx6A02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.60 51.0 4.43e-01 97.7% 85.8%
1i5pA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 53.0 4.32e-01 97.7% 54.4%
4indA03 2.60.120.1330 Mainly Beta › Sandwich › Jelly Rolls › 0.60 52.0 4.68e-01 97.7% 89.1%
3winE03 2.60.120.1090 Mainly Beta › Sandwich › Jelly Rolls › 0.60 51.0 4.77e-01 97.7% 95.5%
1ktbA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.60 45.0 4.49e-01 97.7% 78.0%
4dzgA00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.60 51.0 4.73e-01 96.5% 87.6%
2p17A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 53.0 3.80e-01 100.0% 85.5%
1w0nA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 50.0 4.52e-01 100.0% 68.3%
7qs4A01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.59 51.0 4.08e-01 98.8% 70.4%
4ca9A00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.59 43.0 4.16e-01 94.2% 69.4%
5tipA02 2.70.9.20 Mainly Beta › Distorted Sandwich › Adenovirus Type 2 Hexon; domain 4 › Major capsid protein Vp54 0.58 50.0 3.85e-01 100.0% 89.3%
1ji6A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 51.0 4.16e-01 98.8% 53.7%
3a21A03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 45.0 4.33e-01 95.3% 73.3%
7qryB01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.58 50.0 4.23e-01 100.0% 78.4%
3cu7A10 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.57 45.0 4.15e-01 96.5% 65.2%
1epfA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 50.0 4.81e-01 95.3% 85.4%
4qpwA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 49.0 4.26e-01 100.0% 97.9%
3rykA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 49.0 3.96e-01 98.8% 57.7%
3c12A02 2.60.40.4070 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 44.0 4.48e-01 93.0% 86.2%
2pn5A05 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.57 45.0 4.35e-01 95.3% 78.1%
3isyA00 2.60.40.2360 Mainly Beta › Sandwich › Immunoglobulin-like › Intracellular proteinase inhibitor BsuPI 0.57 47.0 4.34e-01 94.2% 80.3%
1r17A02 2.60.40.1290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 47.0 3.92e-01 95.3% 83.5%
2re9A01 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.56 47.0 3.95e-01 96.5% 99.4%
3rbgD00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 47.0 4.46e-01 94.2% 77.7%
5t89Y06 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 45.0 4.40e-01 88.4% 81.5%
7pjjA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 49.0 4.31e-01 100.0% 79.8%
3qjhA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 47.0 4.39e-01 95.3% 81.3%
3b34A04 2.60.40.1840 Mainly Beta › Sandwich › Immunoglobulin-like › Aminopeptidase N, middle-beta domain 0.54 45.0 4.28e-01 91.9% 88.2%
6m9sD01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 47.0 4.51e-01 100.0% 82.2%
2khaA01 2.60.40.2140 Mainly Beta › Sandwich › Immunoglobulin-like › Beta-1,3-glucan-recognition protein, N-terminal domain 0.54 43.0 4.10e-01 91.9% 74.3%
3abzA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 45.0 3.75e-01 95.3% 100.0%
5fq0A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 44.0 4.06e-01 95.3% 69.1%
1xvsA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.54 46.0 4.12e-01 96.5% 80.5%
1cduA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 44.0 4.25e-01 91.9% 88.8%
2rikA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 40.0 3.99e-01 91.9% 77.2%
4l1dC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 44.0 4.12e-01 91.9% 80.7%
5jpnB04 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.53 46.0 4.16e-01 97.7% 87.6%
3loiA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 39.0 3.26e-01 94.2% 42.5%
1h54B01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.53 46.0 3.27e-01 97.7% 42.4%
4mzuF02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 45.0 3.87e-01 98.8% 60.8%
2z69B00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 47.0 3.92e-01 100.0% 68.0%
5j7mA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 43.0 3.87e-01 97.7% 64.8%
2vdrB02 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.52 42.0 3.58e-01 91.9% 58.8%
3pv7A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 43.0 4.25e-01 91.9% 84.0%
2e9wB05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 44.0 4.39e-01 95.3% 87.9%
4pjeE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 43.0 4.09e-01 95.3% 81.5%
4j25F00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.52 44.0 3.52e-01 98.8% 98.4%
4o9gA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 44.0 3.84e-01 98.8% 64.5%
1dn0D02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 43.0 4.25e-01 95.3% 86.2%
1j0hA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 43.0 3.85e-01 95.3% 70.4%
2qcsB02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 45.0 3.99e-01 100.0% 82.4%
4e2gC00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 38.0 3.45e-01 97.7% 57.9%
3g7dA03 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 37.0 3.37e-01 97.7% 56.5%
ECOD (97)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5033863 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.99 96.0 7.70e-01 98.8% 69.0%
4568752 10.32.1.19 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PPC 0.88 70.0 6.35e-01 97.7% 64.5%
5014927 10.1.2.183 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC 0.88 70.0 6.35e-01 97.7% 64.5%
5060634 10.1.2.183 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC 0.86 68.0 6.18e-01 97.7% 64.5%
5081704 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.85 67.0 4.79e-01 97.7% 30.9%
4929792 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.85 65.0 6.17e-01 97.7% 69.0%
5026423 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.83 64.0 5.91e-01 97.7% 65.7%
5048055 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.82 64.0 5.82e-01 97.7% 63.6%
5048013 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.82 63.0 6.13e-01 97.7% 73.7%
4014484 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.82 62.0 5.93e-01 97.7% 69.0%
5045833 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.82 64.0 5.96e-01 97.7% 67.6%
5041352 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.82 63.0 5.51e-01 97.7% 56.0%
5071851 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.82 63.0 6.00e-01 100.0% 70.0%
4969101 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.81 66.0 6.13e-01 100.0% 70.5%
5050377 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.81 63.0 5.75e-01 97.7% 63.6%
5041163 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.81 62.0 5.77e-01 97.7% 65.7%
3933402 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.81 63.0 5.63e-01 97.7% 60.9%
5059835 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.81 68.0 5.87e-01 100.0% 59.7%
4980801 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.81 64.0 5.94e-01 100.0% 68.6%
4971701 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.80 60.0 5.75e-01 97.7% 68.0%
5058946 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.80 66.0 6.13e-01 100.0% 71.4%
5044901 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.80 63.0 5.65e-01 97.7% 61.7%
4968789 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.80 62.0 5.78e-01 97.7% 66.7%
5047632 10.1.2.183 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC 0.80 65.0 5.88e-01 98.8% 66.4%
5047474 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.80 61.0 5.87e-01 97.7% 72.6%
5068228 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.80 64.0 5.94e-01 96.5% 69.5%
4972680 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.79 58.0 5.66e-01 97.7% 69.5%
4025604 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.79 62.0 5.67e-01 97.7% 64.5%
3933157 11.1.1.1085 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GBD_IRG7_N 0.79 61.0 5.81e-01 96.5% 70.0%
4978630 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.79 63.0 5.94e-01 98.8% 72.0%
5068911 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.79 63.0 5.69e-01 98.8% 63.5%
3220825 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.79 62.0 4.46e-01 96.5% 31.6%
4382620 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.79 62.0 5.96e-01 97.7% 74.7%
3713297 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.79 62.0 5.79e-01 97.7% 68.6%
3228358 10.32.1.258 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_IRG7_N 0.78 61.0 5.95e-01 96.5% 74.7%
5047633 10.1.2.183 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC 0.78 62.0 5.79e-01 97.7% 68.6%
3934762 10.32.1.258 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_IRG7_N 0.78 62.0 5.88e-01 96.5% 72.0%
3935807 10.32.1.258 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_IRG7_N 0.78 62.0 6.09e-01 96.5% 80.0%
3686437 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.77 61.0 5.71e-01 97.7% 68.6%
5046609 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.77 62.0 5.78e-01 97.7% 69.5%
5064207 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.77 58.0 5.51e-01 100.0% 68.0%
3783891 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.77 61.0 5.50e-01 97.7% 62.6%
5039933 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.77 58.0 5.33e-01 98.8% 61.8%
3547487 10.32.1.185 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Androglobin_IV 0.76 57.0 5.02e-01 97.7% 55.8%
3413879 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.76 59.0 5.53e-01 97.7% 67.6%
4408833 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.76 62.0 5.86e-01 98.8% 72.8%
3941204 10.32.1.230 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › NDNF_N 0.76 59.0 5.61e-01 97.7% 71.0%
3227068 11.1.1.1085 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GBD_IRG7_N 0.75 60.0 5.74e-01 96.5% 73.0%
3710159 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.75 58.0 5.34e-01 97.7% 64.5%
5040939 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.75 60.0 5.93e-01 97.7% 81.1%
5040182 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.75 61.0 5.63e-01 97.7% 69.1%
5084091 10.1.2.183 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC 0.75 60.0 5.85e-01 97.7% 77.9%
3618320 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.73 57.0 5.32e-01 97.7% 66.7%
5039338 10.1.2.183 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC 0.73 66.0 5.85e-01 100.0% 70.3%
4028847 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.73 56.0 5.38e-01 97.7% 71.0%
4982154 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.72 56.0 5.34e-01 98.8% 71.0%
5047112 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.72 65.0 6.20e-01 97.7% 84.0%
5013259 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.72 58.0 5.07e-01 97.7% 59.2%
3276612 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.71 66.0 5.51e-01 100.0% 67.1%
3796900 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.71 57.0 5.14e-01 97.7% 63.0%
3268480 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.71 63.0 5.09e-01 97.7% 66.3%
4945064 10.1.2.192 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Big_7 0.70 65.0 5.80e-01 98.8% 77.4%
3621494 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.70 53.0 4.69e-01 97.7% 56.0%
4960906 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.69 53.0 5.05e-01 96.5% 71.0%
5045891 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.68 57.0 5.06e-01 96.5% 65.0%
4955989 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.67 53.0 5.16e-01 98.8% 76.8%
3213179 10.4.1.27 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › PF29839 0.67 49.0 4.34e-01 97.7% 53.1%
5043080 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.66 56.0 5.14e-01 97.7% 71.8%
3992449 10.32.1.213 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF25883 0.66 58.0 4.88e-01 97.7% 66.2%
3472554 10.32.1.6 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.64 57.0 4.57e-01 97.7% 68.5%
3934954 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.64 51.0 3.38e-01 100.0% 19.7%
5037835 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.64 55.0 4.83e-01 98.8% 64.8%
3230488 10.4.1.19 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › Glycoprotein 0.64 48.0 4.51e-01 96.5% 65.7%
5043233 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.64 57.0 5.38e-01 96.5% 83.0%
3686285 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.62 55.0 4.96e-01 97.7% 73.0%
3900462 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.62 54.0 5.02e-01 97.7% 76.4%
3588187 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 55.0 4.58e-01 98.8% 70.9%
3929034 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.61 45.0 4.27e-01 96.5% 64.8%
3600415 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.61 54.0 4.36e-01 100.0% 51.2%
4989052 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 46.0 4.11e-01 98.8% 57.5%
3997319 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.60 52.0 4.80e-01 96.5% 96.4%
3336470 10.32.1.194 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › APD1-4_N 0.60 52.0 4.86e-01 97.7% 77.3%
3596983 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.60 52.0 4.70e-01 97.7% 71.7%
5057293 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 46.0 4.01e-01 97.7% 54.6%
2995199 10.2.1.41 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Capsid_NCLDV 0.59 51.0 4.03e-01 98.8% 87.2%
4103137 10.32.1.104 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › VIR_N 0.58 51.0 4.50e-01 100.0% 94.6%
3475794 10.32.1.104 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › VIR_N 0.58 49.0 4.49e-01 97.7% 98.3%
5036103 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 48.0 4.07e-01 91.9% 70.1%
5045152 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.57 51.0 4.50e-01 98.8% 75.2%
5050287 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.55 46.0 4.58e-01 91.9% 97.8%
3203053 11.1.5.94 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Gpi16 0.55 46.0 3.81e-01 97.7% 54.1%
5038686 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.54 46.0 4.21e-01 96.5% 73.9%
3511264 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.54 43.0 4.24e-01 94.2% 81.1%
3891591 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 45.0 4.14e-01 96.5% 85.0%
3219446 10.4.1.9 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 0.54 45.0 4.23e-01 95.3% 90.9%
3234689 10.32.1.200 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CUB_2 0.53 45.0 4.20e-01 96.5% 91.8%
3743816 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 45.0 3.62e-01 100.0% 65.0%
D4 medium residues 149-251
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4qgrA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.67 49.0 3.75e-01 77.7% 59.7%
2mswA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 49.0 4.58e-01 78.6% 81.6%
2h1yB01 3.40.366.10 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.61 48.0 3.76e-01 87.4% 81.5%
2a5yC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 41.0 3.48e-01 73.8% 70.9%
2lfhA00 4.10.280.10 Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain 0.58 26.0 3.03e-01 84.5% 55.9%
5fg3A03 3.40.50.10050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor IF- 2, domain 3 0.57 43.0 4.19e-01 79.6% 75.7%
1fg7A01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.56 40.0 3.31e-01 76.7% 65.9%
2rrdA00 1.10.150.80 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain 0.55 39.0 3.97e-01 78.6% 74.3%
3obwA02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.55 42.0 4.06e-01 81.6% 87.3%
4ocaA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.55 42.0 3.30e-01 84.5% 90.3%
2grvC03 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.54 41.0 3.28e-01 83.5% 63.8%
3gvpA01 3.40.50.1480 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Adenosylhomocysteinase-like 0.53 38.0 2.96e-01 76.7% 62.0%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5033252 7597.1.1.0 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.96 79.0 7.84e-01 83.5% 81.9%
5047114 7597.1.1.0 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.94 75.0 8.07e-01 82.5% 96.7%
4980802 7597.1.1.0 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.91 74.0 7.26e-01 84.5% 85.5%
4992407 7597.1.1.0 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.86 66.0 5.41e-01 79.6% 52.6%
4992674 7597.1.1.1 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain › CW_binding_2 0.85 65.0 6.66e-01 79.6% 91.0%
4989369 7597.1.1.0 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.84 58.0 6.21e-01 70.9% 85.6%
4674302 7597.1.1.1 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain › CW_binding_2 0.83 63.0 6.62e-01 79.6% 92.6%
5043228 7597.1.1.1 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain › CW_binding_2 0.82 62.0 6.38e-01 79.6% 92.0%
5043545 7597.1.1.0 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.79 62.0 6.43e-01 80.6% 91.6%
4313110 7597.1.1.0 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.77 57.0 6.25e-01 78.6% 92.9%
4931286 2493.1.1.0 a/b three-layered sandwiches › MurF and HprK N-domain-like › MurF and HprK N-domain-like › MurF and HprK N-domain-like 0.56 39.0 3.58e-01 72.8% 98.5%
3980946 102.1.1.2 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HRDC 0.55 37.0 4.00e-01 75.7% 80.0%
4970668 2006.1.4.12 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_6 0.53 37.0 3.47e-01 71.8% 93.8%
4396873 207.1.1.199 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_TTSS 0.53 37.0 2.56e-01 73.8% 20.8%
4294361 2003.1.1.19 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › AlaDh_PNT_C 0.52 41.0 3.63e-01 84.5% 96.1%
3635843 2003.4.1.1 a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP 0.50 40.0 3.25e-01 86.4% 84.5%
4991127 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.50 36.0 3.60e-01 81.6% 70.9%
D5 medium residues 252-421
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2kpoA00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.70 38.0 4.61e-01 98.2% 80.0%
1wv9A00 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.70 33.0 4.47e-01 99.4% 86.2%
1yt8A03 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.70 33.0 4.42e-01 96.5% 83.5%
3eeqA01 3.40.50.11220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.67 36.0 4.22e-01 99.4% 73.3%
4g0mA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 44.0 4.91e-01 99.4% 88.1%
1ii7B02 3.30.110.80 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › DNA double-strand break repair nuclease 0.62 25.0 3.53e-01 96.5% 75.9%
4kxwA03 3.40.50.920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 39.0 4.33e-01 100.0% 81.2%
1duvG01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.60 36.0 3.85e-01 100.0% 66.7%
3kksB00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.59 34.0 3.64e-01 91.2% 62.5%
6n2nC03 3.40.50.920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 34.0 4.08e-01 100.0% 86.5%
3clkB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 33.0 3.80e-01 96.5% 77.9%
4mdaA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.56 32.0 3.08e-01 71.2% 46.0%
7oufB01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.55 32.0 3.38e-01 90.0% 63.8%
2zayA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 33.0 3.84e-01 98.8% 87.0%
4p53A01 3.40.50.1970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 41.0 4.11e-01 99.4% 81.1%
4am8E01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.52 35.0 3.53e-01 99.4% 68.3%
4bc3A02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 45.0 4.24e-01 95.3% 83.7%
7vyjB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 45.0 4.40e-01 96.5% 100.0%
5dxfB01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.50 46.0 3.97e-01 100.0% 89.7%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5033253 7597.1.1.0 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 1.00 81.0 8.59e-01 97.6% 91.0%
5047115 7597.1.1.0 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.89 58.0 6.80e-01 97.6% 89.6%
5082259 7597.1.1.0 a/b three-layered sandwiches › Endolysin C-terminal domain › Endolysin C-terminal domain › Endolysin C-terminal domain 0.69 40.0 4.74e-01 100.0% 82.6%
4975428 7576.1.1.0 a/b three-layered sandwiches › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain 0.64 40.0 4.80e-01 98.2% 92.2%
3959543 7579.1.1.6 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.64 41.0 4.54e-01 100.0% 80.0%
5033435 7576.1.1.1 a/b three-layered sandwiches › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Peptidase_C25 0.61 42.0 4.69e-01 100.0% 91.5%
3886011 7522.1.1.1 a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › Transketolase_C 0.60 38.0 4.15e-01 100.0% 74.8%
3939083 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 33.0 3.31e-01 90.6% 53.5%
4244185 7522.1.1.1 a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › Transketolase_C 0.58 36.0 4.00e-01 99.4% 77.8%
4123075 2007.1.8.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Uroporphyrinogen III synthase (U3S, HemD) › HEM4 0.58 36.0 4.18e-01 95.9% 85.6%
4190876 2003.1.10.30 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › CP_ATPgrasp_2 0.57 33.0 4.15e-01 94.7% 96.0%
4587568 2007.1.7.3 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › Fe-ADH_2 0.55 39.0 4.09e-01 98.8% 78.7%
4957414 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.55 34.0 3.37e-01 99.4% 55.1%
4008012 2484.1.1.202 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve, rve_2 0.55 34.0 3.33e-01 100.0% 55.1%
3980553 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.55 31.0 3.82e-01 95.9% 88.6%
3952641 2484.1.1.194 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve, rve_3 0.55 34.0 3.32e-01 100.0% 53.8%
3983425 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.55 34.0 3.78e-01 100.0% 78.5%
3971375 2484.1.1.194 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve, rve_3 0.54 34.0 3.30e-01 100.0% 54.3%
3588441 2484.1.1.194 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve, rve_3 0.54 34.0 3.48e-01 100.0% 62.4%
4215068 7514.1.1.0 a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain 0.54 36.0 4.14e-01 98.8% 91.2%
2512815 2005.1.1.13 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTP_transf_like 0.54 43.0 4.40e-01 98.8% 85.5%
3672736 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.54 32.0 3.24e-01 90.6% 56.6%
4575598 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.53 35.0 3.08e-01 98.8% 44.7%
5036492 2484.1.1.32 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FGGY_C 0.52 47.0 4.23e-01 98.8% 79.6%
3982342 2484.1.1.194 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve, rve_3 0.52 33.0 3.25e-01 99.4% 56.3%
3986500 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.52 33.0 3.52e-01 99.4% 71.3%
4486115 2484.1.1.30 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Carbam_trans_N 0.52 47.0 4.47e-01 99.4% 93.5%
3519322 2484.1.1.194 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve, rve_3 0.52 31.0 3.03e-01 91.8% 51.3%
3988130 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.52 31.0 3.53e-01 98.8% 79.2%
5043284 7579.1.1.61 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › PhoPQ_related 0.51 46.0 3.89e-01 100.0% 75.8%
3250680 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.50 32.0 3.06e-01 95.9% 54.4%