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IMGVR_UViG_3300037673_000034-3300037673-Ga0314854_000381_30374_30580
Arc-VirIMGVR_UViG_3300037673_000034-3300037673-Ga0314854_000381_30374_30580
Identity
- Kingdom:
- archaea
Quality
80.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-55
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17723.8 best | RHH_8 | 26.6 | 7.60e-06 | 94.5% | 38.7% |
| PF01402.28 | RHH_1 | 23.8 | 4.60e-05 | 76.4% | 95.1% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3no7A00 | 6.10.180.30 | Special › Helix non-globular › Arc Repressor Mutant › | 0.76 | 58.0 | 5.71e-01 | 85.5% | 91.7% |
| 2damA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.63 | 43.0 | 4.07e-01 | 70.9% | 58.2% |
| 3ktwB00 | 3.30.56.30 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Signal recognition particle, SRP19-like subunit | 0.59 | 41.0 | 3.40e-01 | 72.7% | 76.3% |
| 3fewX02 | 3.30.1310.40 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › | 0.56 | 39.0 | 3.43e-01 | 89.1% | 45.3% |
| 2yq1C00 | 3.30.70.390 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Epstein Barr virus nuclear antigen-1, DNA-binding domain | 0.55 | 37.0 | 2.93e-01 | 72.7% | 64.9% |
| 2h29A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 36.0 | 2.52e-01 | 70.9% | 57.4% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4977121 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.99 | 70.0 | 8.22e-01 | 72.7% | 100.0% |
| 4987258 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.98 | 74.0 | 6.90e-01 | 81.8% | 66.2% |
| 4680065 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.95 | 91.0 | 8.77e-01 | 100.0% | 98.3% |
| 4938238 | 101.1.11.4 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › ParD_antitoxin | 0.93 | 67.0 | 6.48e-01 | 74.5% | 70.0% |
| 5035172 | 101.1.11.31 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_8 | 0.93 | 71.0 | 6.65e-01 | 80.0% | 69.2% |
| 5056710 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.93 | 69.0 | 6.49e-01 | 81.8% | 66.2% |
| 5046436 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.90 | 78.0 | 7.31e-01 | 92.7% | 80.0% |
| 5077239 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.88 | 65.0 | 5.64e-01 | 78.2% | 53.8% |
| 4977946 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.85 | 75.0 | 6.69e-01 | 96.4% | 76.0% |
| 4927061 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.83 | 69.0 | 7.17e-01 | 92.7% | 100.0% |
| 2966316 | 101.1.11.4 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › ParD_antitoxin | 0.81 | 69.0 | 5.76e-01 | 92.7% | 57.6% |
| 5012232 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.78 | 69.0 | 6.92e-01 | 96.4% | 100.0% |
| 5011906 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.76 | 58.0 | 5.84e-01 | 87.3% | 81.8% |
| 3586991 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.75 | 60.0 | 5.42e-01 | 87.3% | 68.0% |
| 3963154 | 101.1.11.115 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › Mb1296_C | 0.75 | 61.0 | 6.16e-01 | 90.9% | 96.3% |
| 185638 | 101.1.11.29 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RH3_dom | 0.74 | 60.0 | 5.46e-01 | 89.1% | 69.9% |
| 3005818 | 101.1.11.3 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › TCP | 0.68 | 51.0 | 5.01e-01 | 85.5% | 82.3% |
| 3646563 | 101.1.11.3 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › TCP | 0.65 | 50.0 | 4.10e-01 | 87.3% | 49.1% |
| 4618490 | 148.1.3.326 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF30394 | 0.65 | 44.0 | 3.90e-01 | 72.7% | 72.9% |
| 5029517 | 5060.2.1.0 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain | 0.64 | 46.0 | 3.40e-01 | 76.4% | 44.1% |
| 3807164 | 101.1.11.3 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › TCP | 0.64 | 47.0 | 4.78e-01 | 85.5% | 89.1% |
| 3477895 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.64 | 52.0 | 4.66e-01 | 87.3% | 78.7% |
| None | — | 0.63 | 59.0 | 5.11e-01 | 100.0% | 86.3% | |
| 3991598 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.63 | 55.0 | 4.77e-01 | 92.7% | 80.0% |
| 4009213 | 103.4.1.22 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › PF30394 | 0.62 | 44.0 | 3.83e-01 | 76.4% | 73.3% |
| 3997838 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.62 | 52.0 | 4.92e-01 | 89.1% | 90.8% |
| None | — | 0.62 | 54.0 | 5.10e-01 | 92.7% | 93.8% | |
| 4282585 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.62 | 55.0 | 4.67e-01 | 96.4% | 80.0% |
| 3889817 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.60 | 49.0 | 4.30e-01 | 87.3% | 72.5% |
| 4932792 | 5060.2.1.0 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain | 0.59 | 40.0 | 3.18e-01 | 70.9% | 49.6% |
| 4626289 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.54 | 40.0 | 3.81e-01 | 78.2% | 80.0% |
| 1906415 | 3106.1.1.0 ↗ | 0.51 | 35.0 | 3.60e-01 | 70.9% | 83.3% |