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IMGVR_UViG_3300037673_000034-3300037673-Ga0314854_000381_31072_31665
Arc-VirIMGVR_UViG_3300037673_000034-3300037673-Ga0314854_000381_31072_31665
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-136
Domain cluster:
rep: KC237729.1__AGH27917.1__phiCP51_0026__00026__D12-130
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14470.13 best | bPH_3 | 84.7 | 6.80e-24 | 74.8% | 98.9% |
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fssA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.80 | 53.0 | 6.35e-01 | 73.2% | 98.8% |
| 4tyzA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.78 | 62.0 | 6.72e-01 | 82.7% | 97.2% |
| 3dcxA00 | 2.30.29.50 | Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain | 0.78 | 61.0 | 6.40e-01 | 81.9% | 90.6% |
| 1zc3B00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.77 | 58.0 | 6.26e-01 | 78.7% | 98.2% |
| 4wj7D00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.76 | 53.0 | 5.41e-01 | 71.7% | 100.0% |
| 3qwmA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.76 | 57.0 | 5.73e-01 | 78.0% | 89.8% |
| 4k17B01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.75 | 57.0 | 6.11e-01 | 81.1% | 91.0% |
| 3u12A00 | 2.30.29.180 | Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain | 0.74 | 54.0 | 5.94e-01 | 74.8% | 100.0% |
| 3voqA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.74 | 55.0 | 5.80e-01 | 77.2% | 89.7% |
| 5umsA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.74 | 58.0 | 6.40e-01 | 84.3% | 100.0% |
| 4gzuA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.73 | 59.0 | 5.57e-01 | 84.3% | 75.3% |
| 4emoC00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.73 | 53.0 | 5.59e-01 | 74.8% | 87.1% |
| 2rgnB02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.73 | 55.0 | 5.64e-01 | 78.7% | 87.0% |
| 1txdA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.72 | 57.0 | 5.87e-01 | 82.7% | 91.7% |
| 7csoA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.72 | 54.0 | 5.48e-01 | 78.7% | 100.0% |
| 2kieA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.72 | 59.0 | 6.02e-01 | 86.6% | 97.6% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.71 | 31.0 | 4.19e-01 | 98.4% | 77.6% |
| 2da0A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.70 | 52.0 | 5.43e-01 | 77.2% | 85.1% |
| 4hhvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.69 | 52.0 | 5.68e-01 | 77.2% | 97.1% |
| 2vrwB02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.69 | 57.0 | 5.83e-01 | 86.6% | 94.2% |
| 1ki1B02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.69 | 57.0 | 5.46e-01 | 85.8% | 89.4% |
| 2kr0A01 | 2.30.29.70 | Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 | 0.68 | 49.0 | 5.19e-01 | 74.8% | 98.2% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 26.0 | 3.98e-01 | 73.2% | 87.8% |
| 4khbC00 | 2.30.29.210 | Mainly Beta › Roll › PH-domain like › FACT complex subunit Spt16p/Cdc68p | 0.68 | 50.0 | 5.50e-01 | 81.1% | 91.5% |
| 2dfkC02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.68 | 53.0 | 5.15e-01 | 81.9% | 85.1% |
| 1dbhA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.67 | 55.0 | 5.57e-01 | 87.4% | 100.0% |
| 5u78C00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.66 | 48.0 | 5.03e-01 | 75.6% | 100.0% |
| 3mpxA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.66 | 48.0 | 5.39e-01 | 79.5% | 100.0% |
| 2elbA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.65 | 44.0 | 4.86e-01 | 71.7% | 87.3% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 34.0 | 4.04e-01 | 84.3% | 76.5% |
| 2cofA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 47.0 | 5.00e-01 | 77.2% | 93.5% |
| 4ioyX01 | 2.30.29.150 | Mainly Beta › Roll › PH-domain like › | 0.63 | 52.0 | 5.24e-01 | 89.8% | 100.0% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.60 | 43.0 | 4.22e-01 | 75.6% | 100.0% |
| 1jnrB02 | 6.20.260.10 | Special › Other non-globular › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Adenylylsulphate reductase, beta subunit, C-terminal domain | 0.59 | 24.0 | 2.97e-01 | 72.4% | 55.4% |
| 4v1ap00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 31.0 | 3.50e-01 | 89.8% | 68.0% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.54 | 39.0 | 4.04e-01 | 76.4% | 100.0% |
| 4ozxA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 43.0 | 3.31e-01 | 92.1% | 54.7% |
ECOD (93)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5014255 | 220.1.1.87 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 | 0.93 | 89.0 | 8.72e-01 | 100.0% | 93.3% |
| 3949336 | 220.1.1.216 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Helicase_IV_N | 0.83 | 61.0 | 6.54e-01 | 74.8% | 87.3% |
| 5062759 | 220.1.1.76 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 | 0.82 | 62.0 | 6.92e-01 | 78.0% | 100.0% |
| 5001552 | 220.1.1.76 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 | 0.81 | 59.0 | 6.71e-01 | 80.3% | 100.0% |
| 3717498 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.80 | 65.0 | 5.44e-01 | 84.3% | 81.5% |
| 3478713 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.80 | 65.0 | 6.69e-01 | 84.3% | 94.2% |
| 3250795 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.78 | 72.0 | 6.68e-01 | 97.6% | 94.8% |
| 3779393 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.78 | 64.0 | 6.42e-01 | 85.8% | 88.5% |
| 3742330 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.78 | 64.0 | 6.74e-01 | 85.8% | 96.5% |
| 3234621 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.78 | 64.0 | 6.28e-01 | 85.8% | 86.7% |
| 3742641 | 220.1.1.58 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like | 0.78 | 58.0 | 6.19e-01 | 76.4% | 88.2% |
| 3496967 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.78 | 65.0 | 6.26e-01 | 87.4% | 91.4% |
| 3181728 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.77 | 64.0 | 6.35e-01 | 85.8% | 94.6% |
| 3482713 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.77 | 61.0 | 6.04e-01 | 83.5% | 92.6% |
| 3733887 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.77 | 63.0 | 6.15e-01 | 85.8% | 85.0% |
| 3249763 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.77 | 71.0 | 6.77e-01 | 97.6% | 91.0% |
| 3627615 | 220.1.1.58 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like | 0.77 | 60.0 | 5.69e-01 | 80.3% | 73.1% |
| 3271575 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.77 | 62.0 | 5.79e-01 | 85.0% | 91.6% |
| 3865654 | 220.1.1.52 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SNX17_FERM_C | 0.77 | 57.0 | 5.87e-01 | 76.4% | 95.0% |
| 3801512 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.77 | 59.0 | 6.08e-01 | 79.5% | 86.7% |
| 3228052 | 220.1.1.5 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PID | 0.77 | 58.0 | 5.24e-01 | 78.7% | 91.2% |
| 3514750 | 220.1.1.52 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SNX17_FERM_C | 0.77 | 58.0 | 6.20e-01 | 78.0% | 91.8% |
| 4203238 | 220.1.1.217 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH, GRAM | 0.76 | 61.0 | 4.80e-01 | 83.5% | 43.6% |
| 3782222 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.76 | 62.0 | 5.81e-01 | 85.8% | 70.3% |
| 3767975 | 220.1.1.38 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N | 0.76 | 55.0 | 5.90e-01 | 74.0% | 95.5% |
| 4963350 | 220.1.1.323 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7115 | 0.76 | 56.0 | 6.22e-01 | 81.1% | 97.0% |
| 4963351 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.76 | 62.0 | 6.38e-01 | 98.4% | 90.8% |
| 3249490 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.76 | 62.0 | 6.55e-01 | 85.8% | 96.5% |
| 3509508 | 220.1.1.44 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N | 0.76 | 55.0 | 6.32e-01 | 88.2% | 100.0% |
| 3253075 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.76 | 63.0 | 6.52e-01 | 87.4% | 98.3% |
| 3224914 | 220.1.1.52 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SNX17_FERM_C | 0.76 | 57.0 | 5.96e-01 | 78.0% | 90.4% |
| 3641909 | 220.1.1.9 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Voldacs | 0.76 | 62.0 | 5.68e-01 | 85.8% | 95.0% |
| 3276783 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.75 | 62.0 | 6.12e-01 | 86.6% | 96.3% |
| 3700838 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.75 | 62.0 | 6.16e-01 | 85.8% | 86.9% |
| 3241885 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.75 | 61.0 | 6.14e-01 | 85.0% | 93.6% |
| 3615552 | 220.1.1.12 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Myosin_TH1 | 0.75 | 66.0 | 5.70e-01 | 94.5% | 77.9% |
| 3255173 | 220.1.1.58 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like | 0.75 | 58.0 | 6.05e-01 | 80.3% | 93.0% |
| 3743890 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.75 | 64.0 | 6.10e-01 | 90.6% | 89.0% |
| 3211283 | 220.1.1.27 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD | 0.74 | 69.0 | 6.13e-01 | 100.0% | 98.3% |
| 5054847 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.74 | 58.0 | 6.00e-01 | 81.9% | 100.0% |
| 3575385 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.74 | 55.0 | 6.11e-01 | 77.2% | 100.0% |
| 3916384 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.74 | 60.0 | 6.03e-01 | 86.6% | 93.1% |
| 3913071 | 220.1.1.52 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SNX17_FERM_C | 0.73 | 59.0 | 5.69e-01 | 83.5% | 87.9% |
| 3918879 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.73 | 60.0 | 5.65e-01 | 85.8% | 82.0% |
| 3263932 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.73 | 59.0 | 5.72e-01 | 85.0% | 90.7% |
| 5051533 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.73 | 58.0 | 6.17e-01 | 82.7% | 100.0% |
| 3520779 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.73 | 57.0 | 5.87e-01 | 81.9% | 90.8% |
| 3536413 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.73 | 57.0 | 6.10e-01 | 81.9% | 99.1% |
| 3887822 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.73 | 59.0 | 6.03e-01 | 85.8% | 98.4% |
| 3495264 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.72 | 59.0 | 5.17e-01 | 85.0% | 69.4% |
| 3551796 | 220.1.1.118 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › RHG20_PH | 0.72 | 59.0 | 6.09e-01 | 85.8% | 99.2% |
| 4945655 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.72 | 53.0 | 5.82e-01 | 85.0% | 96.0% |
| 3536818 | 220.1.1.49 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH | 0.72 | 64.0 | 6.44e-01 | 93.7% | 95.2% |
| 3918975 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.72 | 56.0 | 5.86e-01 | 81.1% | 88.7% |
| 3627627 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.72 | 64.0 | 6.15e-01 | 95.3% | 99.3% |
| 3253973 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.72 | 59.0 | 5.33e-01 | 86.6% | 75.3% |
| 3411355 | 220.1.1.115 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_19 | 0.72 | 54.0 | 5.44e-01 | 78.0% | 88.5% |
| 3798262 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.72 | 58.0 | 5.53e-01 | 85.8% | 92.7% |
| 3875149 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.72 | 58.0 | 6.05e-01 | 84.3% | 99.1% |
| 3891866 | 220.1.1.49 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH | 0.72 | 66.0 | 6.40e-01 | 99.2% | 92.9% |
| 3492971 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.72 | 58.0 | 5.27e-01 | 85.0% | 91.5% |
| 3255030 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.72 | 58.0 | 5.90e-01 | 85.8% | 92.0% |
| 3523477 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.72 | 58.0 | 5.05e-01 | 85.0% | 78.4% |
| 3877360 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.72 | 58.0 | 5.92e-01 | 85.8% | 98.4% |
| 3908519 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.72 | 54.0 | 5.49e-01 | 78.7% | 84.0% |
| 3406898 | 220.1.1.125 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_PLEKHM2 | 0.71 | 63.0 | 6.05e-01 | 99.2% | 83.3% |
| 3239798 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.71 | 59.0 | 5.47e-01 | 86.6% | 89.7% |
| 4926953 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.71 | 56.0 | 5.87e-01 | 82.7% | 95.6% |
| 3914585 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.71 | 56.0 | 6.05e-01 | 81.9% | 100.0% |
| 4943079 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.71 | 56.0 | 5.25e-01 | 83.5% | 74.2% |
| 3250700 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.71 | 57.0 | 5.38e-01 | 85.8% | 95.5% |
| 3250819 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.70 | 57.0 | 5.47e-01 | 85.8% | 90.3% |
| 3548274 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.70 | 51.0 | 5.31e-01 | 75.6% | 80.0% |
| 3399725 | 220.1.1.50 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_17 | 0.70 | 55.0 | 5.79e-01 | 82.7% | 97.4% |
| 3992564 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.70 | 56.0 | 5.47e-01 | 85.0% | 82.1% |
| 3861538 | 220.1.1.118 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › RHG20_PH | 0.70 | 57.0 | 5.75e-01 | 85.8% | 97.6% |
| 3905525 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.69 | 55.0 | 5.69e-01 | 85.8% | 88.3% |
| 3530034 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.69 | 58.0 | 6.00e-01 | 89.8% | 98.3% |
| 3883832 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.69 | 59.0 | 5.43e-01 | 90.6% | 80.6% |
| 3896333 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.69 | 51.0 | 4.97e-01 | 76.4% | 73.4% |
| 3734217 | 220.1.1.195 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_fung_RdRP | 0.69 | 58.0 | 5.69e-01 | 88.2% | 99.3% |
| 3860858 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.68 | 53.0 | 5.56e-01 | 81.1% | 90.4% |
| 3774600 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.68 | 62.0 | 5.68e-01 | 98.4% | 97.5% |
| 3232810 | 220.1.1.49 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH | 0.68 | 62.0 | 5.80e-01 | 99.2% | 89.7% |
| 3863010 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.68 | 52.0 | 3.56e-01 | 78.7% | 76.3% |
| 3249359 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.68 | 51.0 | 5.13e-01 | 78.0% | 83.2% |
| 3518268 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.68 | 58.0 | 5.69e-01 | 90.6% | 94.8% |
| 4348945 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.67 | 52.0 | 5.41e-01 | 81.9% | 89.2% |
| 3619467 | 220.1.1.84 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_15 | 0.67 | 55.0 | 5.88e-01 | 99.2% | 100.0% |
| 3915831 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.67 | 59.0 | 5.98e-01 | 100.0% | 96.0% |
| 3935343 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.65 | 53.0 | 4.86e-01 | 86.6% | 95.8% |
| 3909061 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.64 | 46.0 | 4.96e-01 | 73.2% | 90.5% |
| 3266642 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.64 | 58.0 | 5.43e-01 | 100.0% | 80.6% |
D2
medium
residues 165-195
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09851.15 best | SHOCT | 28.7 | 1.10e-06 | 90.3% | 100.0% |
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.99 | 91.0 | 5.93e-01 | 100.0% | 27.2% |
| 2nn4A00 | 1.10.287.760 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like | 0.98 | 88.0 | 6.85e-01 | 100.0% | 50.0% |
| 2cazD00 | 6.10.140.820 | Special › Helix non-globular › Helix Hairpins › | 0.95 | 84.0 | 6.66e-01 | 100.0% | 51.7% |
| 4kb2A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.94 | 82.0 | 5.50e-01 | 100.0% | 28.4% |
| 1zmbA02 | 6.10.170.10 | Special › Helix non-globular › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › | 0.94 | 83.0 | 7.91e-01 | 100.0% | 86.1% |
| 1vq8P03 | 1.10.1200.60 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › | 0.93 | 81.0 | 6.70e-01 | 100.0% | 56.4% |
| 2diwA01 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.91 | 76.0 | 4.87e-01 | 100.0% | 22.0% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.90 | 77.0 | 5.15e-01 | 100.0% | 26.5% |
| 3kd3A02 | 1.10.150.210 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Phosphoserine phosphatase; domain 2 | 0.89 | 75.0 | 6.08e-01 | 100.0% | 51.7% |
| 1yozA00 | 1.10.3200.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like | 0.88 | 74.0 | 5.03e-01 | 100.0% | 27.4% |
| 4ezeB00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.86 | 71.0 | 4.11e-01 | 100.0% | 10.7% |
| 4in3B00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.84 | 70.0 | 3.80e-01 | 100.0% | 5.3% |
| 5c8aA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.84 | 66.0 | 5.14e-01 | 100.0% | 39.7% |
| 2fe1A00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.81 | 68.0 | 4.52e-01 | 100.0% | 23.8% |
| 2i6xA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.81 | 68.0 | 5.20e-01 | 96.8% | 47.9% |
| 1lp1A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.80 | 60.0 | 5.18e-01 | 100.0% | 50.9% |
| 3zdmB00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.77 | 59.0 | 5.36e-01 | 100.0% | 68.0% |
| 1lm7A00 | 3.90.1290.10 | Alpha Beta › Alpha-Beta Complex › beta-hairpin-alpha-hairpin repeat › Plakin repeat | 0.76 | 63.0 | 3.76e-01 | 100.0% | 16.8% |
| 3iylU02 | 1.10.287.1520 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.74 | 62.0 | 5.33e-01 | 100.0% | 58.5% |
| 2jaeA03 | 1.20.1440.240 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.74 | 60.0 | 4.27e-01 | 100.0% | 30.7% |
| 5b00A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.72 | 54.0 | 3.27e-01 | 100.0% | 11.9% |
| 6dv2G02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.71 | 57.0 | 3.59e-01 | 100.0% | 16.8% |
| 1vfrA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.70 | 57.0 | 3.44e-01 | 93.5% | 13.4% |
| 5o6uB00 | 3.30.70.2540 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › CRISPR-associated endoribonuclease Cas6/Csy4 | 0.69 | 52.0 | 3.37e-01 | 100.0% | 17.0% |
| 2y1eA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.66 | 53.0 | 4.03e-01 | 100.0% | 36.8% |
| 2co9A00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.64 | 48.0 | 3.45e-01 | 87.1% | 26.5% |
| 2jgdB02 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.64 | 54.0 | 3.12e-01 | 100.0% | 32.9% |
| 2a8pA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.64 | 51.0 | 3.24e-01 | 100.0% | 18.8% |
| 3d5lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 50.0 | 4.54e-01 | 96.8% | 71.1% |
| 2efeA01 | 1.10.246.120 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.61 | 48.0 | 3.74e-01 | 100.0% | 69.1% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5055565 | 192.15.1.224 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › SHOCT | 1.00 | 92.0 | 5.81e-01 | 100.0% | 23.8% |
| 5036455 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.99 | 91.0 | 5.12e-01 | 100.0% | 10.7% |
| 3555742 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.99 | 90.0 | 6.33e-01 | 100.0% | 36.5% |
| 5029911 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.99 | 89.0 | 7.05e-01 | 100.0% | 52.5% |
| 4959944 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.98 | 89.0 | 5.18e-01 | 100.0% | 14.1% |
| 3282441 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.98 | 89.0 | 5.45e-01 | 100.0% | 19.4% |
| 4220406 | 375.1.9.14 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase › GvpG | 0.98 | 88.0 | 6.66e-01 | 100.0% | 45.6% |
| 3822871 | 108.1.1.23 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › RST | 0.98 | 89.0 | 6.97e-01 | 100.0% | 51.7% |
| 5045248 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.98 | 88.0 | 6.19e-01 | 100.0% | 36.5% |
| 3511354 | 4146.1.1.0 ↗ | alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like | 0.97 | 87.0 | 7.99e-01 | 100.0% | 77.5% |
| 4937908 | 220.1.1.87 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 | 0.97 | 86.0 | 5.31e-01 | 100.0% | 20.3% |
| 3268365 | 192.15.1.3 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Vps23_core | 0.96 | 85.0 | 5.19e-01 | 100.0% | 18.2% |
| 3374816 | 192.15.1.3 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Vps23_core | 0.96 | 85.0 | 5.10e-01 | 100.0% | 16.8% |
| 3474528 | 323.1.1.29 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › DMAP_binding | 0.96 | 78.0 | 4.52e-01 | 90.3% | 11.7% |
| 3412555 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.96 | 85.0 | 5.66e-01 | 100.0% | 28.2% |
| 3491875 | 4146.1.1.0 ↗ | alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like | 0.95 | 84.0 | 6.69e-01 | 100.0% | 51.7% |
| 4998925 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.94 | 82.0 | 5.89e-01 | 100.0% | 36.5% |
| 4037682 | 101.1.1.26 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 | 0.94 | 81.0 | 5.59e-01 | 100.0% | 31.0% |
| 3486312 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.94 | 81.0 | 5.33e-01 | 100.0% | 26.1% |
| 3477387 | 103.1.1.122 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › DMAP_binding | 0.93 | 81.0 | 7.47e-01 | 100.0% | 77.5% |
| 3282520 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.93 | 82.0 | 6.20e-01 | 100.0% | 44.3% |
| 3343260 | 192.15.1.123 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Na_H_Exchanger | 0.93 | 81.0 | 6.67e-01 | 100.0% | 56.4% |
| 3438984 | 192.15.1.176 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Cornichon | 0.91 | 78.0 | 5.67e-01 | 100.0% | 37.3% |
| 4071991 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.91 | 78.0 | 4.72e-01 | 100.0% | 16.8% |
| 4203622 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.90 | 76.0 | 4.70e-01 | 100.0% | 17.7% |
| 3218210 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.90 | 75.0 | 4.30e-01 | 100.0% | 11.1% |
| 4419476 | 4958.1.1.1 ↗ | a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 0.89 | 75.0 | 4.61e-01 | 100.0% | 17.7% |
| 5066143 | 5041.1.1.0 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C | 0.89 | 74.0 | 5.65e-01 | 100.0% | 41.3% |
| 3663440 | 109.4.1.359 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exo70_C | 0.89 | 74.0 | 3.98e-01 | 100.0% | 5.5% |
| 3188198 | 3151.1.1.0 ↗ | alpha arrays › SPP1 phage GP23.1 › SPP1 phage GP23.1 › SPP1 phage GP23.1 | 0.88 | 75.0 | 7.00e-01 | 100.0% | 77.5% |
| 4076608 | 109.4.1.924 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_CcmH_CycH | 0.87 | 71.0 | 4.09e-01 | 100.0% | 10.5% |
| 3742303 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.86 | 73.0 | 4.46e-01 | 100.0% | 16.0% |
| 4934254 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.86 | 71.0 | 4.61e-01 | 100.0% | 22.3% |
| 3621219 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 72.0 | 5.70e-01 | 100.0% | 47.7% |
| 3988447 | 5043.1.1.0 ↗ | extended segments › Sensor proteins transmembrane domains › Htr2 transmembrane domain-like › Htr2 transmembrane domain-like | 0.83 | 69.0 | 5.86e-01 | 100.0% | 56.4% |
| 3944926 | 3151.1.1.0 ↗ | alpha arrays › SPP1 phage GP23.1 › SPP1 phage GP23.1 › SPP1 phage GP23.1 | 0.80 | 65.0 | 6.39e-01 | 100.0% | 88.6% |
| 3915663 | 632.22.1.9 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › Ciart | 0.74 | 60.0 | 4.60e-01 | 100.0% | 39.7% |
| 3460419 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.73 | 56.0 | 4.85e-01 | 100.0% | 53.3% |
| 4124570 | 1054.1.1.1 ↗ | alpha bundles › Arginine decarboxylase C-terminal helical extension › Arginine decarboxylase C-terminal helical extension › Arginine decarboxylase C-terminal helical extension › Arg_decarbox_C | 0.73 | 56.0 | 5.22e-01 | 100.0% | 68.9% |
| 3318685 | 284.1.3.2 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C | 0.67 | 47.0 | 3.34e-01 | 87.1% | 22.9% |