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IMGVR_UViG_3300037802_000125-3300037802-Ga0402110_001150_6302_6652
Arc-VirIMGVR_UViG_3300037802_000125-3300037802-Ga0402110_001150_6302_6652
Identity
- Kingdom:
- archaea
Quality
90.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-115
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hgzA02 | 2.20.25.570 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.76 | 35.0 | 4.81e-01 | 70.4% | 85.0% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 39.0 | 4.62e-01 | 92.2% | 93.4% |
| 5bw0F00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.61 | 34.0 | 3.77e-01 | 89.6% | 67.0% |
| 2kf2A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 39.0 | 3.45e-01 | 94.8% | 43.7% |
| 1lshB00 | 2.20.90.10 | Mainly Beta › Single Sheet › Lipovitellin-phosvitin complex; beta-sheet shell regions › Vitellinogen, beta-sheet shell domain | 0.60 | 35.0 | 3.06e-01 | 76.5% | 38.5% |
| 1ylxA00 | 3.30.70.1480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like | 0.59 | 40.0 | 4.30e-01 | 99.1% | 81.8% |
| 3hdjA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.59 | 37.0 | 3.45e-01 | 84.3% | 51.4% |
| 1x7dB01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.57 | 38.0 | 3.36e-01 | 87.8% | 46.2% |
| 1omoA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.57 | 38.0 | 3.48e-01 | 83.5% | 51.7% |
| 3en8A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 40.0 | 4.13e-01 | 90.4% | 77.7% |
| 2k54A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 48.0 | 4.76e-01 | 95.7% | 91.1% |
| 2fpnA01 | 3.30.2030.10 | Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like | 0.55 | 44.0 | 4.10e-01 | 96.5% | 70.0% |
| 1c7hA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 43.0 | 4.22e-01 | 92.2% | 78.9% |
| 4u13A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 41.0 | 4.24e-01 | 87.8% | 89.0% |
| 3fljA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 42.0 | 3.96e-01 | 90.4% | 70.9% |
| 5eo6B00 | 3.40.1500.10 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › Coproporphyrinogen III oxidase, aerobic | 0.52 | 42.0 | 3.14e-01 | 87.8% | 87.9% |
| 3fcxB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 40.0 | 3.08e-01 | 82.6% | 49.5% |
| 7r97A02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 31.0 | 3.81e-01 | 75.7% | 98.5% |
| 3g0kA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 45.0 | 4.42e-01 | 98.3% | 88.3% |
| 2g30A01 | 2.60.40.1150 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 37.0 | 3.77e-01 | 75.7% | 86.3% |
| 8fkmA01 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.51 | 40.0 | 3.55e-01 | 82.6% | 87.2% |
| 1wibA00 | 3.30.1550.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein L11, N-terminal domain › Ribosomal protein L11/L12, N-terminal domain | 0.51 | 25.0 | 2.79e-01 | 94.8% | 54.3% |
| 2d4rA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 39.0 | 3.66e-01 | 93.0% | 65.8% |
| 3f40A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 39.0 | 3.97e-01 | 90.4% | 84.7% |
| 3f8xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 40.0 | 3.91e-01 | 90.4% | 75.8% |
| 1lhpA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 41.0 | 3.08e-01 | 90.4% | 95.8% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4464658 | 274.1.1.59 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGG | 0.75 | 38.0 | 3.86e-01 | 75.7% | 49.1% |
| 4976136 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.70 | 42.0 | 4.64e-01 | 84.3% | 73.7% |
| 3737742 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.69 | 47.0 | 4.81e-01 | 87.8% | 72.5% |
| 5070518 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.65 | 42.0 | 3.96e-01 | 93.0% | 54.8% |
| 5047426 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.64 | 43.0 | 4.30e-01 | 96.5% | 67.8% |
| 3378755 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.64 | 48.0 | 4.69e-01 | 94.8% | 72.8% |
| 3177232 | 331.9.1.4 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Coatomer_g_Cpla | 0.62 | 41.0 | 4.14e-01 | 93.0% | 67.0% |
| 1678533 | 243.3.1.10 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YPEB_PepSY1-2 | 0.61 | 36.0 | 4.44e-01 | 89.6% | 95.7% |
| 3474976 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.60 | 45.0 | 4.37e-01 | 94.8% | 70.0% |
| 4965152 | 3692.1.1.1 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall | 0.60 | 39.0 | 3.82e-01 | 84.3% | 59.7% |
| 1710650 | 3692.1.1.0 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain | 0.59 | 37.0 | 3.95e-01 | 84.3% | 70.6% |
| 5025792 | 3692.1.1.1 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall | 0.59 | 38.0 | 3.88e-01 | 87.0% | 65.2% |
| 3062996 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.59 | 46.0 | 4.37e-01 | 82.6% | 100.0% |
| 6647 | 241.8.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › GK1464-like › GK1464-like › DUF5634 | 0.59 | 40.0 | 4.29e-01 | 99.1% | 81.0% |
| 3962383 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.58 | 43.0 | 4.25e-01 | 90.4% | 72.0% |
| 4950072 | 3692.1.1.1 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall | 0.58 | 39.0 | 3.85e-01 | 87.0% | 64.0% |
| 5045854 | 243.5.1.0 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region | 0.57 | 37.0 | 4.34e-01 | 93.0% | 95.0% |
| 4466226 | 5087.1.1.1 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 › Vit_b-sht_shell | 0.57 | 33.0 | 3.51e-01 | 80.9% | 63.8% |
| 4408843 | 3692.1.1.1 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall | 0.57 | 39.0 | 3.65e-01 | 84.3% | 56.6% |
| 1948932 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.57 | 44.0 | 4.60e-01 | 100.0% | 89.6% |
| 4025923 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.56 | 37.0 | 4.35e-01 | 91.3% | 96.2% |
| 3436093 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.56 | 34.0 | 3.98e-01 | 80.0% | 90.7% |
| 3169357 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.56 | 39.0 | 4.00e-01 | 97.4% | 74.5% |
| 6411 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.56 | 48.0 | 4.76e-01 | 95.7% | 91.1% |
| 3655368 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.56 | 33.0 | 3.94e-01 | 80.0% | 90.7% |
| 4666593 | 241.1.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C | 0.55 | 39.0 | 3.57e-01 | 97.4% | 54.7% |
| 3457289 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.54 | 44.0 | 4.15e-01 | 95.7% | 70.7% |
| 4933284 | 3692.1.1.1 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › OCD_Mu_crystall | 0.54 | 39.0 | 3.60e-01 | 80.9% | 58.3% |
| 3782746 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.53 | 47.0 | 4.86e-01 | 99.1% | 100.0% |
| 5071336 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.53 | 46.0 | 4.45e-01 | 98.3% | 85.9% |
| 3989344 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.53 | 47.0 | 4.57e-01 | 98.3% | 92.0% |
| 1349151 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.52 | 41.0 | 4.24e-01 | 87.8% | 89.0% |
| 3287996 | 243.1.1.80 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26580 | 0.52 | 38.0 | 3.98e-01 | 87.0% | 83.8% |
| 3706632 | 267.1.1.0 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain | 0.52 | 43.0 | 3.95e-01 | 100.0% | 67.7% |
| 4160858 | 241.1.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C | 0.51 | 38.0 | 3.48e-01 | 76.5% | 81.9% |
| 4461912 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.51 | 38.0 | 3.91e-01 | 83.5% | 81.8% |
| 3931097 | 3535.1.1.0 ↗ | a+b two layers › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 | 0.51 | 38.0 | 3.27e-01 | 80.0% | 74.7% |
| 6327 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.51 | 39.0 | 3.66e-01 | 93.0% | 65.8% |