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IMGVR_UViG_3300037808_000437-3300037808-Ga0427880_002112_14671_14865
Arc-VirIMGVR_UViG_3300037808_000437-3300037808-Ga0427880_002112_14671_14865
Identity
- Kingdom:
- archaea
Quality
73.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-63
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ibvB00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.59 | 51.0 | 2.87e-01 | 100.0% | 21.0% |
| 2pvjA01 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.59 | 42.0 | 2.85e-01 | 76.2% | 82.2% |
| 3k6jA02 | 1.10.1040.50 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › | 0.58 | 41.0 | 2.86e-01 | 74.6% | 86.8% |
| 1t7pA02 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.54 | 42.0 | 3.23e-01 | 87.3% | 94.3% |
| 3emrA00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.53 | 46.0 | 3.00e-01 | 96.8% | 75.5% |
| 4f9cA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.52 | 44.0 | 3.10e-01 | 93.7% | 44.4% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3676029 | 4958.1.1.1 ↗ | a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 0.65 | 55.0 | 3.62e-01 | 92.1% | 45.7% |
| 3295046 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.65 | 57.0 | 4.55e-01 | 96.8% | 93.6% |
| 3664992 | 4958.1.1.0 ↗ | a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit | 0.61 | 48.0 | 3.41e-01 | 87.3% | 49.5% |
| 3601444 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 53.0 | 3.31e-01 | 100.0% | 41.5% |
| 3991469 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.60 | 46.0 | 2.88e-01 | 84.1% | 19.7% |
| 4613954 | 4271.1.1.0 ↗ | alpha complex topology › PriB N-terminal domain-like › PriB N-terminal domain-like › PriB N-terminal domain-like | 0.59 | 53.0 | 3.73e-01 | 100.0% | 60.9% |
| 3666571 | 109.4.1.1993 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif, TPR_24 | 0.58 | 39.0 | 2.26e-01 | 74.6% | 7.3% |
| 3992156 | 109.4.1.2569 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RasGEF_N_2, RICTOR_M, RICTOR_V | 0.57 | 40.0 | 2.48e-01 | 74.6% | 12.2% |
| 3281567 | 101.1.2.26 ↗ | alpha arrays › HTH › HTH › winged helix domain › HxlR | 0.57 | 44.0 | 3.55e-01 | 98.4% | 43.2% |
| 3944068 | 101.1.2.26 ↗ | alpha arrays › HTH › HTH › winged helix domain › HxlR | 0.53 | 42.0 | 3.39e-01 | 100.0% | 44.8% |
| 3866658 | 376.1.1.45 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-NOSIP | 0.52 | 45.0 | 3.62e-01 | 92.1% | 62.6% |