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IMGVR_UViG_3300037842_000514-3300037842-Ga0427874_000162_8597_9427

Arc-Vir

IMGVR_UViG_3300037842_000514-3300037842-Ga0427874_000162_8597_9427

Quality

95.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-270
PDB
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4r9xA00 3.20.20.380 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Copper homeostasis (CutC) domain 0.76 61.0 6.67e-01 99.6% 98.7%
1efzA00 3.20.20.105 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Queuine tRNA-ribosyltransferase-like 0.76 72.0 6.36e-01 100.0% 84.9%
1iq8A01 3.20.20.105 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Queuine tRNA-ribosyltransferase-like 0.75 72.0 6.45e-01 100.0% 78.9%
3cu2A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.74 59.0 6.33e-01 100.0% 94.0%
4df0A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.73 51.0 5.88e-01 100.0% 94.5%
1l6wA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.72 52.0 5.74e-01 87.3% 89.5%
1gvfB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.71 63.0 6.32e-01 100.0% 90.5%
7tbvB02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.70 56.0 5.87e-01 100.0% 90.8%
4mzyA02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.70 42.0 5.20e-01 94.0% 94.0%
3tr2B00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.69 54.0 5.93e-01 100.0% 96.8%
1gw1A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.69 65.0 5.75e-01 100.0% 86.4%
2a4aA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.68 58.0 6.06e-01 100.0% 94.8%
3ayvD00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.68 57.0 5.98e-01 100.0% 94.7%
3fndA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.68 61.0 6.12e-01 100.0% 94.4%
2qezE03 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.67 57.0 5.55e-01 100.0% 80.9%
2h9aA01 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.67 53.0 5.46e-01 100.0% 84.8%
1qv9A01 3.40.50.10830 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) 0.67 31.0 4.03e-01 80.9% 74.7%
5c54G00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.66 61.0 5.85e-01 98.9% 99.0%
4pcfC00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.65 54.0 5.72e-01 100.0% 98.3%
8b73B01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.65 58.0 5.42e-01 94.4% 85.2%
8fumD01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.64 57.0 5.17e-01 93.6% 95.4%
3h5dA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 60.0 5.75e-01 98.5% 95.3%
1k77A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.64 58.0 5.91e-01 100.0% 99.2%
8fumA01 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.63 56.0 5.12e-01 93.3% 96.5%
1ep3A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.63 60.0 5.68e-01 100.0% 86.2%
5afdA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.63 59.0 5.71e-01 99.6% 98.3%
1dosA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.63 56.0 5.02e-01 93.6% 91.6%
1qtwA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.62 59.0 5.77e-01 100.0% 96.5%
3tvaA00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.62 59.0 5.79e-01 100.0% 96.5%
3cz8A01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.62 53.0 5.58e-01 91.4% 98.4%
2f6kA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.61 55.0 5.25e-01 95.9% 94.1%
3shoA00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.60 33.0 3.89e-01 90.3% 74.7%
3s4tA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.60 54.0 5.01e-01 95.9% 94.3%
3ij6A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.59 53.0 5.14e-01 95.9% 93.4%
5uqiA00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.59 33.0 3.84e-01 90.6% 75.0%
1pz1A00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.59 55.0 5.12e-01 100.0% 83.7%
4gxwB00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.59 54.0 4.85e-01 98.5% 89.6%
1afsA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.58 54.0 5.06e-01 99.3% 81.5%
3sggA02 3.20.20.490 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › GxGYxYP glycoside hydrolase, C-terminal domain 0.58 45.0 4.62e-01 100.0% 84.3%
2yvaA00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.57 35.0 4.05e-01 90.3% 82.9%
3g8rA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 51.0 5.28e-01 100.0% 99.6%
7en7A01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.57 32.0 3.76e-01 89.9% 76.3%
3bdvA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 37.0 4.27e-01 89.9% 90.6%
5t3oA02 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 31.0 4.02e-01 80.5% 98.6%
7tjbA01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.55 37.0 4.09e-01 84.3% 84.5%
2vptA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.55 37.0 4.21e-01 90.6% 88.6%
5l3sB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 41.0 4.59e-01 100.0% 98.1%
3e58B01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.54 27.0 3.45e-01 80.9% 80.3%
3e48A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 35.0 4.10e-01 80.5% 93.4%
3milB00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.52 36.0 3.81e-01 98.9% 77.7%
4c6rA00 3.40.50.10140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain 0.52 29.0 3.62e-01 74.5% 88.3%
3mdqA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 26.0 3.59e-01 77.2% 100.0%
1zu4A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 40.0 4.36e-01 98.5% 98.2%
1judA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.50 27.0 3.51e-01 100.0% 91.7%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4945925 2002.1.1.73 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.77 74.0 6.48e-01 100.0% 76.8%
5049216 2002.1.1.73 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.76 74.0 6.57e-01 100.0% 80.6%
4979409 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.76 73.0 6.55e-01 100.0% 79.4%
4060639 2002.1.1.73 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.74 71.0 6.09e-01 100.0% 87.5%
5074917 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.74 70.0 6.36e-01 99.6% 84.1%
5048645 2002.1.1.73 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.74 70.0 6.33e-01 100.0% 87.1%
4946342 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.73 70.0 6.00e-01 100.0% 78.0%
4997013 2002.1.1.73 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.73 70.0 6.72e-01 100.0% 94.2%
3343443 2002.1.1.73 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.73 70.0 5.96e-01 100.0% 82.5%
4033280 2002.1.1.38 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TAL_FSA 0.72 54.0 6.05e-01 100.0% 97.1%
4376893 2002.1.1.206 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF561 0.72 60.0 6.01e-01 100.0% 85.6%
4995886 2002.1.1.73 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.72 68.0 6.14e-01 100.0% 81.4%
4990831 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.71 66.0 6.28e-01 96.6% 89.5%
3707902 2002.1.1.111 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI 0.71 62.0 6.22e-01 96.3% 89.6%
3990121 2002.1.1.105 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEP-utilizers_C 0.70 62.0 6.17e-01 92.5% 96.1%
4238827 2002.1.1.113 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › CdhD 0.70 55.0 5.58e-01 100.0% 82.3%
4026034 2002.1.1.76 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC 0.67 58.0 5.97e-01 100.0% 95.0%
5051884 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.65 56.0 4.83e-01 90.3% 91.4%
4021146 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.65 61.0 5.21e-01 100.0% 79.0%
4937396 2002.1.1.29 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS 0.65 61.0 5.66e-01 98.9% 98.5%
5064690 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.64 59.0 5.93e-01 100.0% 96.3%
4403689 2002.1.1.29 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS 0.64 60.0 5.77e-01 98.9% 99.3%
1030291 2002.1.1.29 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS 0.64 60.0 5.68e-01 98.5% 92.2%
None 0.64 60.0 5.72e-01 100.0% 88.1%
5070822 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.64 59.0 5.94e-01 100.0% 98.9%
3633694 2002.1.1.13 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red 0.63 60.0 5.41e-01 100.0% 80.8%
4212254 2002.1.1.29 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS 0.63 59.0 5.70e-01 97.8% 95.9%
None 0.63 60.0 5.73e-01 100.0% 88.2%
None 0.63 60.0 5.71e-01 100.0% 87.3%
5072948 2002.1.1.134 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 0.63 56.0 5.33e-01 94.4% 94.0%
3289647 2002.1.1.394 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF4015 0.63 59.0 5.58e-01 100.0% 98.1%
None 0.63 60.0 5.66e-01 100.0% 86.1%
None 0.63 59.0 5.68e-01 100.0% 88.2%
None 0.63 59.0 5.65e-01 100.0% 87.2%
3725962 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.62 30.0 3.50e-01 100.0% 61.1%
4976702 2002.1.1.60 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.62 59.0 5.72e-01 100.0% 95.5%
4961872 2002.1.1.134 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 0.62 57.0 5.10e-01 97.0% 96.4%
3506285 2002.1.2.8 a/b barrels › TIM beta/alpha-barrel › TIM barrels › Hypothetical protein Cthe_0052 › F_bP_aldolase 0.62 37.0 4.54e-01 74.5% 89.7%
5076918 2002.1.1.134 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 0.60 54.0 4.98e-01 96.3% 95.1%
5053303 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.60 54.0 4.90e-01 96.3% 94.6%
4033918 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.59 33.0 3.72e-01 90.6% 68.6%
3512256 2007.6.1.0 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain 0.58 32.0 3.46e-01 90.6% 59.6%
4407847 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.58 33.0 3.75e-01 90.6% 71.5%
3268682 2002.1.1.73 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TGT 0.57 48.0 5.02e-01 100.0% 95.9%
3624403 7570.1.1.4 a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › PF27239 0.57 35.0 4.45e-01 70.0% 100.0%
4867185 2002.1.1.134 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 0.57 52.0 5.18e-01 97.8% 95.7%
3164034 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.56 32.0 3.64e-01 91.0% 71.7%
4997473 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.55 50.0 4.94e-01 98.1% 95.5%
167873 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.55 37.0 4.21e-01 90.6% 88.6%
3867313 7570.1.1.4 a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › PF27239 0.55 35.0 4.31e-01 71.2% 98.8%
3946125 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.55 31.0 3.46e-01 90.6% 67.6%
3559291 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.54 31.0 3.98e-01 75.7% 99.3%
5060661 2499.2.1.1 a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 0.54 39.0 4.04e-01 73.4% 90.4%
5016067 2002.1.1.120 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.53 49.0 4.78e-01 99.6% 93.6%
3638762 7579.1.1.36 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 0.51 39.0 3.72e-01 79.0% 85.8%
3913712 7579.1.1.71 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DDHD 0.51 41.0 4.11e-01 82.4% 95.2%
2157033 2003.6.1.4 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › ADP_PFK_GK 0.50 45.0 3.72e-01 97.0% 92.0%