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IMGVR_UViG_3300037993_000673-3300037993-Ga0427919_0015362_1_543

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300037993_000673-3300037993-Ga0427919_0015362_1_543 ↗
Kingdom:: archaea

Quality

84.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 37-123

PDB

Domain cluster: representative

CATH (12)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3op1A02	2.40.30.30	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like	0.62	43.0	4.02e-01	73.6%	100.0%
6bhdA03	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.60	40.0	4.66e-01	77.0%	95.2%
2efiA00	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.56	44.0	4.20e-01	88.5%	72.0%
3p26A03	2.40.30.10	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors	0.56	40.0	3.68e-01	73.6%	82.7%
2j7qA00	3.90.70.120	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A ›	0.56	40.0	2.98e-01	75.9%	48.5%
5h4eA02	3.30.920.50	Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain	0.55	46.0	4.18e-01	95.4%	98.3%
4r3dA03	2.60.120.1680	Mainly Beta › Sandwich › Jelly Rolls ›	0.53	36.0	3.13e-01	70.1%	43.8%
1qmyA00	3.90.70.10	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases	0.53	36.0	2.98e-01	70.1%	52.6%
1a1rA02	2.40.10.10	Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases	0.53	33.0	3.35e-01	74.7%	63.5%
4p5nA00	2.30.30.1060	Mainly Beta › Roll › SH3 type barrels. ›	0.52	36.0	3.90e-01	72.4%	94.6%
1yzbA01	3.90.70.40	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A ›	0.51	37.0	3.34e-01	77.0%	66.9%
3isrA01	3.10.620.30	Alpha Beta › Roll › C8orf32 fold ›	0.51	35.0	2.80e-01	72.4%	88.6%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3764432	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.61	42.0	4.77e-01	85.1%	95.4%
3829242	219.1.1.113 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PF28979	0.60	41.0	2.89e-01	70.1%	63.6%
2770320	219.1.1.39 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF1175	0.56	38.0	3.01e-01	70.1%	42.2%
4930010	1.1.7.141 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MazE_antitoxin	0.56	39.0	3.87e-01	74.7%	89.5%
3553166	4.8.1.6 ↗	beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot	0.55	47.0	4.14e-01	92.0%	94.4%
4883586	1.1.7.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C	0.55	39.0	3.95e-01	73.6%	93.0%
3730835	4.8.1.10 ↗	beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like	0.55	47.0	4.55e-01	90.8%	91.6%
6452	4111.1.1.1 ↗	a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AAL_decarboxy	0.55	37.0	3.92e-01	70.1%	88.3%
3684527	221.1.5.3 ↗	a+b two layers › beta-Grasp › Ubiquitin-related › Chemotaxis inhibitory protein CHIPS › DUF7734	0.54	38.0	3.73e-01	73.6%	90.3%
1649062	219.1.1.43 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CoV_peptidase	0.53	35.0	2.54e-01	70.1%	23.4%
3697633	4111.1.1.1 ↗	a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AAL_decarboxy	0.52	44.0	3.34e-01	97.7%	92.3%
3662509	4.2.1.4 ↗	beta barrels › SH3 › SAND › SAND › TDBD	0.52	39.0	3.61e-01	79.3%	67.0%