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IMGVR_UViG_3300037993_001200-3300037993-Ga0427919_0011843_3_173
Arc-VirIMGVR_UViG_3300037993_001200-3300037993-Ga0427919_0011843_3_173
Identity
- Kingdom:
- archaea
Quality
82.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-55
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mlqH00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.67 | 44.0 | 4.56e-01 | 74.5% | 71.4% |
| 2iv2X04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.67 | 56.0 | 4.49e-01 | 97.9% | 82.8% |
| 1b12C01 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.67 | 53.0 | 3.98e-01 | 89.4% | 36.4% |
| 6cz7C02 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.66 | 55.0 | 4.11e-01 | 97.9% | 50.8% |
| 4p5nA00 | 2.30.30.1060 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 52.0 | 4.64e-01 | 93.6% | 71.6% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 56.0 | 4.38e-01 | 97.9% | 60.8% |
| 7nz1G01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.64 | 52.0 | 4.24e-01 | 95.7% | 50.0% |
| 3kbgA03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 45.0 | 4.27e-01 | 74.5% | 64.3% |
| 2hgaA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.62 | 50.0 | 4.18e-01 | 91.5% | 50.6% |
| 4bdxA00 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.60 | 43.0 | 3.68e-01 | 95.7% | 44.6% |
| 5i7pA02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.60 | 46.0 | 4.67e-01 | 97.9% | 89.6% |
| 2cw8A03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.59 | 41.0 | 2.90e-01 | 76.6% | 36.7% |
| 1qcsA02 | 3.10.330.10 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.57 | 47.0 | 3.74e-01 | 95.7% | 86.7% |
| 2oolA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 48.0 | 3.79e-01 | 100.0% | 77.6% |
| 3g7kB02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.57 | 40.0 | 2.73e-01 | 76.6% | 18.8% |
| 2qtfA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 43.0 | 3.05e-01 | 89.4% | 86.2% |
| 1b35B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 40.0 | 2.62e-01 | 83.0% | 60.4% |
| 1bwzA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.55 | 42.0 | 3.16e-01 | 87.2% | 92.1% |
| 2jysA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.55 | 42.0 | 3.64e-01 | 95.7% | 62.6% |
| 2jwyA01 | 2.60.40.1620 | Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like | 0.55 | 40.0 | 3.00e-01 | 83.0% | 87.4% |
| 2kc5A01 | 3.30.1460.40 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › [NiFe]-hydrogenase assembly chaperone, HybE | 0.55 | 45.0 | 3.38e-01 | 100.0% | 75.0% |
| 2x24A02 | 2.40.460.10 | Mainly Beta › Beta Barrel › ClpP/crotonase fold › Biotin dependent carboxylase carboxyltransferase | 0.54 | 37.0 | 3.34e-01 | 97.9% | 48.5% |
| 1u0kA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.54 | 41.0 | 3.05e-01 | 85.1% | 93.2% |
| 3v0aB02 | 1.20.1120.10 | Mainly Alpha › Up-down Bundle › "Clostridium botulinum neurotoxin B, ""coiled-coil"" domain" › "Clostridium botulinum neurotoxin b, ""coiled-coil"" domain" | 0.53 | 37.0 | 2.29e-01 | 74.5% | 53.8% |
| 2wyrB02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.53 | 44.0 | 3.74e-01 | 97.9% | 71.8% |
| 4i14A02 | 3.40.50.10990 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › GTP cyclohydrolase II | 0.53 | 35.0 | 2.65e-01 | 72.3% | 25.4% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 39.0 | 3.21e-01 | 89.4% | 42.2% |
| 3qdfA01 | 2.30.30.370 | Mainly Beta › Roll › SH3 type barrels. › FAH | 0.53 | 36.0 | 3.42e-01 | 72.3% | 55.2% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 40.0 | 3.23e-01 | 89.4% | 43.4% |
| 4lrzE02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 43.0 | 3.53e-01 | 100.0% | 90.4% |
| 3slzA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.51 | 41.0 | 3.27e-01 | 100.0% | 76.3% |
| 2otnB01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.51 | 42.0 | 3.08e-01 | 100.0% | 80.1% |
| 1ym5A01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.51 | 42.0 | 3.15e-01 | 100.0% | 85.3% |
| 3dmgA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 34.0 | 2.35e-01 | 72.3% | 46.4% |
| 1mtpA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.51 | 34.0 | 2.90e-01 | 72.3% | 95.6% |
| 7szeB01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.50 | 40.0 | 3.20e-01 | 95.7% | 45.8% |
ECOD (65)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5050320 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.97 | 91.0 | 7.58e-01 | 100.0% | 62.7% |
| 4979291 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.97 | 91.0 | 7.58e-01 | 100.0% | 64.0% |
| 4971470 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.94 | 87.0 | 7.28e-01 | 100.0% | 62.7% |
| 4044269 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.92 | 83.0 | 7.14e-01 | 100.0% | 65.7% |
| 5056826 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.92 | 71.0 | 6.31e-01 | 83.0% | 60.0% |
| 4948433 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.92 | 84.0 | 7.32e-01 | 100.0% | 69.1% |
| 5000741 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.91 | 76.0 | 6.79e-01 | 95.7% | 66.2% |
| 4944045 | 4.17.1.2 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › Asparaginase | 0.90 | 80.0 | 7.00e-01 | 100.0% | 67.1% |
| 5036592 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.86 | 77.0 | 6.54e-01 | 100.0% | 65.3% |
| 5081442 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.86 | 77.0 | 6.71e-01 | 100.0% | 67.1% |
| 5058457 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.85 | 74.0 | 6.61e-01 | 100.0% | 70.8% |
| 4963111 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.81 | 53.0 | 5.43e-01 | 76.6% | 71.1% |
| 4032535 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.75 | 57.0 | 3.91e-01 | 83.0% | 50.3% |
| 5038496 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.75 | 49.0 | 5.21e-01 | 74.5% | 80.0% |
| 5014946 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.72 | 51.0 | 3.69e-01 | 83.0% | 26.9% |
| 4084190 | 4.1.1.98 ↗ | beta barrels › SH3 › SH3 › SH3 › ProQ_C | 0.71 | 50.0 | 4.73e-01 | 89.4% | 61.0% |
| 3503815 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.70 | 51.0 | 4.21e-01 | 89.4% | 43.5% |
| 5067107 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.70 | 58.0 | 4.89e-01 | 97.9% | 57.6% |
| 3603398 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.69 | 58.0 | 4.58e-01 | 100.0% | 81.7% |
| 3959718 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.69 | 58.0 | 4.41e-01 | 97.9% | 82.6% |
| 4954224 | 4.1.1.182 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2097 | 0.68 | 55.0 | 4.44e-01 | 91.5% | 48.4% |
| 3284381 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.68 | 56.0 | 4.40e-01 | 91.5% | 79.0% |
| 3463181 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 49.0 | 4.39e-01 | 89.4% | 52.9% |
| 5012950 | 1.1.2.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › MacB_PCD | 0.68 | 56.0 | 4.57e-01 | 93.6% | 51.1% |
| 3451171 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 50.0 | 4.52e-01 | 89.4% | 58.5% |
| 4949173 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.67 | 55.0 | 4.49e-01 | 97.9% | 56.6% |
| 4938514 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.66 | 55.0 | 4.63e-01 | 97.9% | 56.5% |
| 4665979 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.66 | 54.0 | 4.09e-01 | 95.7% | 41.1% |
| 4989928 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.66 | 56.0 | 4.24e-01 | 100.0% | 40.8% |
| 3393360 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.65 | 47.0 | 3.61e-01 | 89.4% | 32.2% |
| 4080757 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.65 | 55.0 | 4.52e-01 | 100.0% | 72.6% |
| 4992405 | 1.1.2.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › MacB_PCD | 0.64 | 52.0 | 4.16e-01 | 93.6% | 54.0% |
| 3389311 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 46.0 | 3.71e-01 | 89.4% | 37.0% |
| 5054027 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.64 | 51.0 | 4.26e-01 | 95.7% | 51.2% |
| 3923769 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.63 | 53.0 | 4.57e-01 | 100.0% | 81.2% |
| 4139867 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.63 | 52.0 | 4.30e-01 | 100.0% | 75.8% |
| 3570369 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.62 | 49.0 | 4.04e-01 | 89.4% | 47.8% |
| 3967671 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.62 | 52.0 | 4.14e-01 | 100.0% | 81.9% |
| 753 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.62 | 50.0 | 3.94e-01 | 91.5% | 41.7% |
| 4145445 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.62 | 50.0 | 4.04e-01 | 97.9% | 80.0% |
| 4006298 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.62 | 49.0 | 4.76e-01 | 97.9% | 80.0% |
| 3302166 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.62 | 47.0 | 4.30e-01 | 85.1% | 61.5% |
| 3839042 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 42.0 | 4.34e-01 | 83.0% | 77.8% |
| 4993449 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.60 | 48.0 | 3.89e-01 | 97.9% | 73.3% |
| 4938084 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.60 | 48.0 | 3.89e-01 | 93.6% | 45.3% |
| 4299573 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.60 | 49.0 | 3.87e-01 | 95.7% | 75.2% |
| 5054112 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 46.0 | 4.20e-01 | 85.1% | 84.6% |
| 3931055 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.60 | 50.0 | 4.38e-01 | 97.9% | 66.7% |
| 2036627 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.60 | 47.0 | 4.24e-01 | 97.9% | 62.0% |
| 5031732 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.59 | 46.0 | 3.68e-01 | 95.7% | 52.2% |
| 3513844 | 708.1.2.11 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › STEEP1 | 0.59 | 39.0 | 3.03e-01 | 72.3% | 32.0% |
| 4013811 | 4.8.1.22 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 | 0.59 | 49.0 | 4.05e-01 | 97.9% | 52.2% |
| 3972732 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.59 | 45.0 | 3.55e-01 | 97.9% | 60.5% |
| 4932925 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.58 | 48.0 | 3.68e-01 | 97.9% | 61.7% |
| 3830350 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.56 | 34.0 | 1.96e-01 | 83.0% | 5.4% |
| 4964662 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.56 | 46.0 | 3.57e-01 | 100.0% | 48.3% |
| 4367862 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.56 | 47.0 | 3.71e-01 | 100.0% | 80.0% |
| 3994295 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 42.0 | 2.56e-01 | 89.4% | 17.1% |
| 3377432 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.55 | 34.0 | 1.96e-01 | 80.9% | 5.9% |
| 3414167 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 46.0 | 3.07e-01 | 100.0% | 64.4% |
| 4946773 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.53 | 39.0 | 2.49e-01 | 85.1% | 19.4% |
| 5029170 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.52 | 40.0 | 3.14e-01 | 97.9% | 99.2% |
| 3282315 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.51 | 41.0 | 2.97e-01 | 100.0% | 40.0% |
| 5083185 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.51 | 38.0 | 3.68e-01 | 87.2% | 98.2% |
| 3789900 | 220.1.1.5 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PID | 0.51 | 36.0 | 2.71e-01 | 80.9% | 31.1% |