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IMGVR_UViG_3300038302_000185-3300038302-Ga0427885_001682_2_127
Arc-VirIMGVR_UViG_3300038302_000185-3300038302-Ga0427885_001682_2_127
Identity
- Kingdom:
- archaea
Quality
85.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-41
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3iieB03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.79 | 58.0 | 4.44e-01 | 77.5% | 44.7% |
| 4i1eA03 | 1.25.10.30 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › IP3 receptor type 1 binding core, RIH domain | 0.74 | 61.0 | 4.21e-01 | 100.0% | 27.3% |
| 1zkeA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 63.0 | 4.92e-01 | 97.5% | 88.9% |
| 4fppA02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.71 | 54.0 | 3.68e-01 | 90.0% | 24.1% |
| 3lphC00 | 6.10.140.630 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 55.0 | 4.94e-01 | 97.5% | 60.3% |
| 3n5lA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 60.0 | 5.43e-01 | 100.0% | 77.2% |
| 7e84A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.67 | 53.0 | 3.74e-01 | 92.5% | 28.5% |
| 4ywoA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.64 | 51.0 | 3.72e-01 | 90.0% | 54.7% |
| 8b6jF01 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.58 | 44.0 | 3.88e-01 | 90.0% | 58.2% |
| 3d2yA02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.56 | 42.0 | 3.44e-01 | 82.5% | 70.2% |
| 8ctsB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 41.0 | 3.47e-01 | 95.0% | 46.0% |
| 3zqmA00 | 6.10.140.2160 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 44.0 | 4.02e-01 | 100.0% | 72.9% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4929490 | 621.1.1.0 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0.84 | 62.0 | 4.65e-01 | 80.0% | 40.0% |
| 56801 | 150.6.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › SO2669-like › SO2669-like | 0.80 | 63.0 | 5.39e-01 | 87.5% | 59.4% |
| 3269634 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.78 | 56.0 | 4.91e-01 | 77.5% | 55.0% |
| 3231243 | 4177.1.1.10 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › GMIP-like_FCH | 0.75 | 66.0 | 3.91e-01 | 97.5% | 14.1% |
| 3320951 | 601.2.1.5 ↗ | alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes › Ctr | 0.74 | 63.0 | 4.49e-01 | 97.5% | 34.2% |
| 4871185 | 138.1.1.0 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain | 0.73 | 52.0 | 5.28e-01 | 75.0% | 89.7% |
| 3426161 | 601.1.2.74 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Rx_N | 0.72 | 63.0 | 4.39e-01 | 100.0% | 34.6% |
| 3372591 | 170.1.1.15 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C › Retrotran_gag_2 | 0.70 | 58.0 | 4.38e-01 | 97.5% | 38.1% |
| 4416267 | 192.6.1.1 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATP-synt_DE | 0.70 | 56.0 | 5.27e-01 | 92.5% | 90.0% |
| 3407357 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.69 | 56.0 | 3.70e-01 | 92.5% | 21.9% |
| 3944683 | 4168.1.1.1 ↗ | alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain › HAMP | 0.67 | 53.0 | 4.79e-01 | 92.5% | 63.6% |
| 3226772 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.64 | 50.0 | 3.34e-01 | 92.5% | 22.7% |
| 4032954 | 3218.1.1.0 ↗ | a+b duplicates or obligate multimers › small terminase oligomerization domain › small terminase oligomerization domain › small terminase oligomerization domain | 0.64 | 55.0 | 5.16e-01 | 100.0% | 82.0% |
| 4556742 | 170.1.1.0 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C | 0.64 | 46.0 | 3.58e-01 | 77.5% | 34.4% |
| 4826991 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.63 | 49.0 | 4.28e-01 | 92.5% | 56.5% |
| 4344493 | 7566.1.1.1 ↗ | a/b three-layered sandwiches › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › GTP-bdg_N,GTP-bdg_M | 0.58 | 51.0 | 3.30e-01 | 100.0% | 37.3% |