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IMGVR_UViG_3300038304_000181-3300038304-Ga0427894_001133_4440_4733

Arc-Vir

IMGVR_UViG_3300038304_000181-3300038304-Ga0427894_001133_4440_4733

Identity

Kingdom:
archaea

Quality

76.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-97
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.69 35.0 4.66e-01 79.4% 97.9%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 39.0 4.55e-01 85.6% 81.2%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 36.0 4.22e-01 87.6% 83.1%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.63 35.0 4.28e-01 93.8% 92.9%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 37.0 4.38e-01 89.7% 90.5%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 35.0 4.11e-01 85.6% 81.8%
4ld6A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 42.0 3.98e-01 100.0% 59.8%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 35.0 4.17e-01 85.6% 90.3%
2krtA01 3.10.450.270 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 37.0 3.67e-01 100.0% 61.2%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 27.0 3.01e-01 100.0% 54.7%
1n9pA00 2.60.40.1400 Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 0.55 44.0 3.48e-01 85.6% 61.9%
1oqwA00 3.30.700.10 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin 0.54 34.0 3.01e-01 100.0% 43.1%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 29.0 3.32e-01 81.4% 73.2%
2wllA02 2.60.40.1400 Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 0.52 42.0 3.70e-01 87.6% 66.9%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5018717 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.70 40.0 5.14e-01 80.4% 100.0%
4991994 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.66 37.0 4.57e-01 93.8% 94.5%
4970648 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.64 35.0 4.46e-01 90.7% 100.0%
4931072 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.64 38.0 4.39e-01 85.6% 81.4%
5044597 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.63 33.0 4.15e-01 79.4% 94.0%
3948467 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.63 38.0 4.45e-01 89.7% 89.2%
3643549 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.62 37.0 4.04e-01 87.6% 71.2%
4646632 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.62 36.0 4.28e-01 90.7% 86.2%
3608236 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.62 37.0 4.31e-01 90.7% 87.7%
4037383 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.61 36.0 4.22e-01 87.6% 86.2%
4997059 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.61 38.0 4.23e-01 85.6% 81.3%
4364336 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.60 33.0 4.07e-01 94.8% 92.7%
3693121 375.1.1.26 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.60 39.0 3.72e-01 82.5% 57.3%
3950208 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.60 36.0 4.19e-01 87.6% 87.7%
4284764 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.60 36.0 4.17e-01 87.6% 87.7%
4073200 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.60 36.0 4.14e-01 87.6% 87.7%
3998245 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 33.0 3.02e-01 76.3% 42.4%
5050697 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.56 30.0 3.71e-01 80.4% 96.0%
3228051 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.54 32.0 3.81e-01 100.0% 89.2%
3567677 11.1.1.110 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin_2 0.51 30.0 3.43e-01 99.0% 80.0%
4954387 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.51 42.0 3.43e-01 89.7% 95.0%
3978017 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.51 45.0 2.92e-01 100.0% 81.8%
3273659 246.3.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos 0.51 42.0 2.91e-01 93.8% 29.3%
None — 0.50 37.0 2.63e-01 77.3% 38.7%
3414101 11.1.1.934 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N, Arrestin_C 0.50 39.0 2.71e-01 85.6% 44.9%