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IMGVR_UViG_3300038312_000168-3300038312-Ga0134836_000233_10439_10849

Arc-Vir

IMGVR_UViG_3300038312_000168-3300038312-Ga0134836_000233_10439_10849

Quality

58.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 47-125
PDB
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2uytA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.66 58.0 4.16e-01 100.0% 43.0%
3aapA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.65 55.0 4.79e-01 96.2% 91.2%
4nspA00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.63 53.0 3.82e-01 94.9% 46.6%
4it7A00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 42.0 3.90e-01 73.4% 67.3%
2rkcA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.61 52.0 3.38e-01 98.7% 87.5%
6oziB00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.59 50.0 3.60e-01 96.2% 46.9%
1l3aA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.59 49.0 3.98e-01 97.5% 81.9%
1pguA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 49.0 3.23e-01 91.1% 70.1%
2w35A00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.57 47.0 3.53e-01 96.2% 47.5%
3rhtA00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.56 48.0 3.41e-01 96.2% 51.6%
2ch9A01 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 39.0 3.54e-01 73.4% 63.7%
6x05A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 43.0 2.81e-01 84.8% 22.0%
2k4vA00 3.30.160.370 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 0.55 48.0 4.12e-01 97.5% 72.0%
3pquA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.55 47.0 3.73e-01 100.0% 81.4%
3uaqB02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.55 45.0 3.70e-01 96.2% 83.4%
2obdA01 3.15.20.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 2 › Bactericidal permeability-increasing protein; domain 2 0.54 43.0 2.89e-01 84.8% 42.0%
2iecD00 3.30.1300.20 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 7,8-dihydroneopterin aldolase (MptD) 0.54 37.0 3.27e-01 100.0% 47.9%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.53 37.0 4.02e-01 91.1% 90.5%
4l8hB00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.52 39.0 3.48e-01 83.5% 52.8%
6yfiB01 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.51 40.0 3.40e-01 84.8% 83.0%
2wliA02 2.60.40.1400 Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 0.51 43.0 3.55e-01 100.0% 98.8%
2hngA00 3.10.420.10 Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like 0.51 40.0 3.50e-01 87.3% 77.6%
2wllA02 2.60.40.1400 Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 0.51 41.0 3.52e-01 94.9% 85.5%
7alkA01 2.60.40.3510 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 42.0 3.53e-01 100.0% 83.1%
3fynA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.50 37.0 3.02e-01 79.7% 70.4%
1ms9A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.50 43.0 2.82e-01 98.7% 34.4%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3702616 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.73 58.0 4.95e-01 84.8% 71.2%
1687158 2484.1.1.41 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK 0.67 58.0 4.55e-01 97.5% 85.2%
3291496 868.1.1.0 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related 0.67 55.0 3.94e-01 93.7% 48.6%
3658408 4325.1.1.13 mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF4371 0.66 53.0 5.49e-01 87.3% 98.7%
3933012 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 48.0 2.91e-01 84.8% 11.3%
3927366 2484.1.1.4 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H 0.66 57.0 4.65e-01 96.2% 53.3%
3641990 295.1.1.39 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF4371 0.66 51.0 5.23e-01 83.5% 94.7%
3811894 2484.1.1.198 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, DUF4371 0.65 58.0 3.67e-01 98.7% 21.2%
3239720 2484.1.1.50 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT 0.65 56.0 3.46e-01 98.7% 17.0%
3462608 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.65 57.0 3.48e-01 98.7% 17.1%
3223921 2484.1.1.259 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF26742 0.65 55.0 5.31e-01 94.9% 96.7%
3676745 2484.1.1.157 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 0.65 57.0 4.76e-01 98.7% 62.1%
3243679 2484.1.1.259 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF26742 0.65 55.0 3.55e-01 98.7% 21.2%
3940409 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.65 55.0 3.44e-01 96.2% 22.2%
3651732 2484.1.1.157 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 0.64 57.0 3.94e-01 98.7% 33.7%
3457175 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 57.0 3.99e-01 100.0% 47.3%
4974213 2484.1.1.77 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C 0.64 55.0 4.21e-01 98.7% 42.1%
3526186 2484.1.1.204 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 0.64 55.0 3.44e-01 98.7% 17.0%
3826575 2484.1.1.198 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, DUF4371 0.64 56.0 3.50e-01 98.7% 19.2%
3681567 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 55.0 3.42e-01 98.7% 16.8%
3914552 192.18.1.0 alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.64 55.0 3.41e-01 98.7% 16.9%
3645698 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 55.0 4.30e-01 98.7% 46.7%
3663874 2484.1.1.157 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 0.64 56.0 3.57e-01 98.7% 21.5%
3683658 2484.1.1.157 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 0.64 55.0 3.64e-01 98.7% 24.2%
3993283 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 54.0 3.82e-01 97.5% 34.7%
3920627 192.18.1.0 alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.64 54.0 3.36e-01 97.5% 18.8%
3671250 2484.1.1.215 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27041 0.63 55.0 4.57e-01 98.7% 57.9%
3508989 2484.1.1.230 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 0.63 54.0 4.43e-01 97.5% 52.9%
3517477 2484.1.1.230 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 0.63 54.0 4.97e-01 97.5% 81.0%
3936956 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.63 43.0 3.89e-01 70.9% 84.5%
3916200 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.63 54.0 3.43e-01 98.7% 19.8%
3374455 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.63 53.0 3.65e-01 96.2% 25.3%
3537025 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.63 56.0 3.36e-01 98.7% 16.1%
3924083 2484.1.1.204 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 0.63 55.0 4.36e-01 100.0% 49.4%
3928581 2484.1.1.157 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 0.63 55.0 3.36e-01 98.7% 17.3%
3504143 2484.1.1.230 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 0.63 54.0 4.33e-01 97.5% 53.1%
3347628 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.62 54.0 3.86e-01 98.7% 32.2%
3799692 2484.1.1.50 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT 0.62 53.0 3.30e-01 98.7% 18.0%
3566979 2484.1.1.198 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, DUF4371 0.62 54.0 3.29e-01 100.0% 16.0%
3531937 2484.1.1.317 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF28925 0.62 54.0 3.34e-01 100.0% 18.0%
3923261 2484.1.1.230 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 0.62 53.0 4.70e-01 98.7% 70.0%
3938634 2484.1.1.50 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT 0.61 53.0 3.38e-01 98.7% 20.9%
3664107 192.18.1.0 alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.61 53.0 3.07e-01 100.0% 10.4%
3830643 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.61 54.0 5.20e-01 97.5% 86.7%
3661619 192.18.1.0 alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.61 53.0 3.91e-01 100.0% 38.2%
3996952 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.60 53.0 3.67e-01 100.0% 31.1%
3562870 2484.1.1.204 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 0.60 52.0 3.25e-01 98.7% 17.6%
3927804 243.3.1.1 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin 0.60 42.0 3.83e-01 73.4% 69.7%
3516180 2484.1.1.230 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 0.60 51.0 4.77e-01 98.7% 80.8%
3505861 2484.1.1.204 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 0.60 51.0 3.60e-01 98.7% 31.9%
3577972 243.3.1.1 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin 0.59 41.0 3.59e-01 73.4% 61.6%
3928228 2484.1.1.43 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.59 49.0 3.56e-01 94.9% 47.9%
3337433 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.59 50.0 5.05e-01 97.5% 98.8%
4010500 7503.1.1.24 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › PF25851 0.58 45.0 3.65e-01 84.8% 59.7%
3562464 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 49.0 3.10e-01 98.7% 24.4%
3276150 2.1.1.52 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Stn1 0.57 46.0 3.71e-01 86.1% 77.3%
3253359 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.57 46.0 3.10e-01 92.4% 90.9%
3837099 2484.1.1.43 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.57 46.0 3.33e-01 93.7% 43.5%
4975146 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.57 46.0 3.82e-01 87.3% 82.2%
3474782 2.1.1.67 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1_2 0.56 45.0 3.76e-01 86.1% 78.5%
3412961 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 47.0 3.06e-01 100.0% 33.4%
3259935 2484.1.1.43 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.55 44.0 3.26e-01 93.7% 44.0%
4346973 213.1.1.2 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1,Hat1_N 0.55 48.0 3.78e-01 98.7% 67.4%
4456473 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.55 47.0 2.94e-01 97.5% 27.6%
4024178 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 48.0 3.07e-01 98.7% 26.8%
4947486 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 43.0 3.70e-01 89.9% 54.8%
3429580 2484.1.1.43 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.54 44.0 3.63e-01 94.9% 69.4%
3729005 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.53 42.0 2.91e-01 84.8% 54.1%
3829906 2484.1.1.198 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, DUF4371 0.53 42.0 2.86e-01 84.8% 80.0%
3603591 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 40.0 2.72e-01 87.3% 31.1%
3722420 2008.1.1.143 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF7924 0.52 39.0 3.18e-01 86.1% 40.6%
3216630 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 44.0 2.88e-01 97.5% 40.2%
None 0.52 42.0 2.97e-01 93.7% 98.3%
3973413 7503.1.1.0 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain 0.52 44.0 3.61e-01 97.5% 52.3%
3406375 223.1.1.29 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 0.51 45.0 3.51e-01 100.0% 81.1%
3240591 2484.1.1.43 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.51 41.0 3.09e-01 96.2% 45.6%