←Back to structures
IMGVR_UViG_3300038312_000168-3300038312-Ga0134836_000233_40918_41553
Arc-VirIMGVR_UViG_3300038312_000168-3300038312-Ga0134836_000233_40918_41553
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-137
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02732.22 best | ERCC4 | 68.6 | 7.90e-19 | 97.1% | 97.9% |
CATH (51)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1j24A00 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.90 | 79.0 | 8.04e-01 | 100.0% | 93.2% |
| 2bgwB01 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.89 | 79.0 | 8.09e-01 | 100.0% | 96.2% |
| 4bxoA01 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.83 | 71.0 | 7.17e-01 | 100.0% | 89.6% |
| 4lnuB01 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.66 | 60.0 | 4.86e-01 | 100.0% | 96.5% |
| 3snkA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 51.0 | 5.42e-01 | 100.0% | 95.0% |
| 3elbA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.65 | 44.0 | 4.13e-01 | 71.3% | 55.8% |
| 2x0kA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.65 | 45.0 | 4.08e-01 | 71.3% | 55.4% |
| 1tezA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.64 | 43.0 | 4.47e-01 | 71.3% | 71.9% |
| 4p0tB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 57.0 | 5.54e-01 | 100.0% | 92.0% |
| 3bm3A00 | 3.40.91.80 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.62 | 55.0 | 4.46e-01 | 97.1% | 61.0% |
| 3khtA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 52.0 | 5.35e-01 | 100.0% | 94.7% |
| 3odhA00 | 3.40.91.20 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.62 | 50.0 | 4.43e-01 | 86.0% | 61.3% |
| 2vptA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.62 | 56.0 | 4.90e-01 | 100.0% | 97.0% |
| 2fb6A00 | 3.40.1260.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like | 0.61 | 42.0 | 4.54e-01 | 71.3% | 94.0% |
| 3rimB01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.60 | 51.0 | 3.82e-01 | 91.9% | 55.7% |
| 4bj1A02 | 3.40.50.12060 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 40.0 | 3.89e-01 | 83.8% | 60.8% |
| 1o4wA00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.60 | 40.0 | 4.14e-01 | 71.3% | 72.8% |
| 1u9yA01 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 52.0 | 5.04e-01 | 97.1% | 99.3% |
| 3aw9A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 51.0 | 4.60e-01 | 100.0% | 93.3% |
| 6znpA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 47.0 | 4.06e-01 | 88.2% | 67.5% |
| 2c54A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 50.0 | 4.55e-01 | 97.8% | 86.9% |
| 1q1gA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.57 | 51.0 | 4.23e-01 | 100.0% | 93.4% |
| 3qleA00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.56 | 39.0 | 3.59e-01 | 72.1% | 54.4% |
| 2d73A02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 50.0 | 3.86e-01 | 100.0% | 91.9% |
| 1isiA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 43.0 | 4.42e-01 | 92.6% | 85.9% |
| 3e15A00 | 3.40.50.1360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 45.0 | 3.60e-01 | 89.0% | 67.4% |
| 8alzB05 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 46.0 | 4.01e-01 | 89.0% | 67.3% |
| 6s8oB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 46.0 | 3.94e-01 | 89.0% | 66.0% |
| 3a21B01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 45.0 | 3.54e-01 | 89.0% | 59.0% |
| 7rzy101 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 42.0 | 3.79e-01 | 80.9% | 62.0% |
| 5hvmA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 46.0 | 4.00e-01 | 93.4% | 59.6% |
| 4a8jA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 48.0 | 3.81e-01 | 97.1% | 75.1% |
| 5jioA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 45.0 | 3.97e-01 | 93.4% | 59.8% |
| 5lqdA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 49.0 | 4.23e-01 | 100.0% | 77.8% |
| 5f2kB02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 45.0 | 3.98e-01 | 94.9% | 83.2% |
| 1o1yA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.53 | 47.0 | 4.03e-01 | 100.0% | 97.8% |
| 7miqA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 30.0 | 3.85e-01 | 100.0% | 100.0% |
| 1jx7A00 | 3.40.1260.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like | 0.53 | 40.0 | 4.32e-01 | 97.1% | 94.0% |
| 5b3kA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.53 | 47.0 | 4.57e-01 | 100.0% | 99.3% |
| 4iqyB00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.53 | 43.0 | 3.76e-01 | 90.4% | 90.4% |
| 5vegB00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.53 | 46.0 | 4.52e-01 | 100.0% | 98.7% |
| 5fszA00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.53 | 43.0 | 3.64e-01 | 90.4% | 78.4% |
| 3zm6A03 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.52 | 44.0 | 4.26e-01 | 97.1% | 81.5% |
| 4dqlA03 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.52 | 38.0 | 3.67e-01 | 95.6% | 65.2% |
| 2r60A02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.52 | 47.0 | 4.04e-01 | 100.0% | 74.9% |
| 5kivA01 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.51 | 42.0 | 3.82e-01 | 89.0% | 77.2% |
| 1pjrA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 44.0 | 3.89e-01 | 97.8% | 64.0% |
| 5dcaA09 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 41.0 | 3.59e-01 | 89.7% | 56.7% |
| 2bgiA02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.51 | 38.0 | 3.72e-01 | 96.3% | 70.8% |
| 4d86A01 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.50 | 41.0 | 3.74e-01 | 89.7% | 76.1% |
| 3q71A00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.50 | 42.0 | 3.73e-01 | 91.2% | 70.4% |
ECOD (71)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5041780 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.92 | 82.0 | 8.14e-01 | 100.0% | 90.0% |
| 4987973 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.90 | 80.0 | 7.69e-01 | 100.0% | 84.0% |
| 11030 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.89 | 79.0 | 8.05e-01 | 100.0% | 94.0% |
| 4945737 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.89 | 79.0 | 7.48e-01 | 100.0% | 80.6% |
| 3956943 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.89 | 80.0 | 7.74e-01 | 100.0% | 85.3% |
| 4998923 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.89 | 85.0 | 7.76e-01 | 100.0% | 88.8% |
| 4948196 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.89 | 79.0 | 8.11e-01 | 100.0% | 96.9% |
| 4990260 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.89 | 78.0 | 7.77e-01 | 100.0% | 89.3% |
| 5032065 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.89 | 80.0 | 7.93e-01 | 100.0% | 91.4% |
| 4030512 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.88 | 84.0 | 7.10e-01 | 100.0% | 74.8% |
| 5035600 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.88 | 83.0 | 7.77e-01 | 100.0% | 83.1% |
| 5008608 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.88 | 82.0 | 7.90e-01 | 100.0% | 88.0% |
| 3276300 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.86 | 81.0 | 6.94e-01 | 100.0% | 69.3% |
| 4021437 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.85 | 81.0 | 6.72e-01 | 100.0% | 69.1% |
| 4118447 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.85 | 81.0 | 6.57e-01 | 100.0% | 61.3% |
| 3173824 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.85 | 81.0 | 6.76e-01 | 100.0% | 65.6% |
| 3639672 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.85 | 80.0 | 6.43e-01 | 100.0% | 62.0% |
| 4024881 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.85 | 77.0 | 7.41e-01 | 100.0% | 86.0% |
| 4447742 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.84 | 79.0 | 6.59e-01 | 100.0% | 69.1% |
| 3760846 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.83 | 79.0 | 6.79e-01 | 100.0% | 81.5% |
| 3217738 | 2008.1.1.12 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Rad10 | 0.83 | 68.0 | 6.81e-01 | 100.0% | 82.9% |
| 4882455 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.82 | 78.0 | 6.93e-01 | 100.0% | 76.2% |
| 3573694 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.82 | 78.0 | 6.49e-01 | 100.0% | 71.8% |
| 4288654 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.81 | 74.0 | 7.24e-01 | 100.0% | 90.3% |
| 3702525 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.78 | 72.0 | 6.93e-01 | 100.0% | 89.7% |
| 3258324 | 2008.1.1.156 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF29906 | 0.72 | 67.0 | 6.33e-01 | 100.0% | 86.9% |
| 4945319 | 2004.1.1.206 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_31 | 0.66 | 60.0 | 4.90e-01 | 100.0% | 98.8% |
| 3259259 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.64 | 58.0 | 5.32e-01 | 100.0% | 94.4% |
| 3893393 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.64 | 45.0 | 4.42e-01 | 79.4% | 66.9% |
| 3267484 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.64 | 58.0 | 5.25e-01 | 100.0% | 90.3% |
| 5053332 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.63 | 57.0 | 5.20e-01 | 99.3% | 98.3% |
| 3518970 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.63 | 57.0 | 4.86e-01 | 100.0% | 89.5% |
| 3654710 | 2003.1.6.9 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › SHMT | 0.63 | 42.0 | 4.18e-01 | 72.1% | 65.0% |
| 4985278 | 2004.1.1.85 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ArsA_ATPase | 0.63 | 56.0 | 4.33e-01 | 100.0% | 97.8% |
| 3248825 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.62 | 55.0 | 4.88e-01 | 100.0% | 82.4% |
| 137066 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.62 | 52.0 | 5.35e-01 | 100.0% | 94.7% |
| 3976298 | 7579.1.1.9 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Esterase | 0.62 | 55.0 | 4.39e-01 | 100.0% | 77.5% |
| 3603964 | 2004.1.1.85 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ArsA_ATPase | 0.61 | 52.0 | 3.97e-01 | 94.9% | 91.3% |
| 4966165 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.60 | 45.0 | 4.29e-01 | 78.7% | 81.7% |
| 3168091 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.60 | 46.0 | 3.84e-01 | 80.9% | 80.4% |
| 4001523 | 2005.1.1.36 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 | 0.60 | 41.0 | 4.14e-01 | 71.3% | 69.6% |
| 3482358 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.59 | 48.0 | 4.55e-01 | 89.7% | 99.4% |
| 3722983 | 2005.1.1.36 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 | 0.58 | 39.0 | 3.86e-01 | 71.3% | 63.4% |
| 3254129 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 52.0 | 5.09e-01 | 100.0% | 91.3% |
| 4978035 | 2007.2.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_5 | 0.58 | 52.0 | 4.68e-01 | 98.5% | 98.4% |
| 5045620 | 2007.2.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_5 | 0.57 | 51.0 | 4.64e-01 | 100.0% | 92.6% |
| 3282641 | 2007.2.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_5 | 0.57 | 51.0 | 4.67e-01 | 100.0% | 92.8% |
| 5079505 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.57 | 41.0 | 4.04e-01 | 74.3% | 81.8% |
| 4016005 | 2004.1.1.189 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 | 0.56 | 46.0 | 3.79e-01 | 89.7% | 73.3% |
| 3673255 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.55 | 41.0 | 3.70e-01 | 77.2% | 81.1% |
| 3837596 | 2005.1.1.41 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_C | 0.55 | 46.0 | 4.26e-01 | 97.1% | 70.3% |
| 4024065 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 45.0 | 4.05e-01 | 88.2% | 83.2% |
| 4224234 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.54 | 41.0 | 3.86e-01 | 79.4% | 83.5% |
| 4014422 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 45.0 | 4.15e-01 | 89.0% | 88.6% |
| 3394198 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.54 | 49.0 | 4.50e-01 | 100.0% | 88.0% |
| 3241343 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.54 | 40.0 | 3.95e-01 | 78.7% | 76.0% |
| 3402141 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.54 | 44.0 | 4.19e-01 | 89.0% | 85.5% |
| 3178773 | 2003.1.5.47 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PRMT5 | 0.54 | 40.0 | 3.53e-01 | 79.4% | 53.0% |
| 3727025 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.54 | 44.0 | 3.61e-01 | 89.0% | 61.2% |
| 4999390 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.54 | 49.0 | 4.23e-01 | 100.0% | 72.9% |
| 3590097 | 3010.1.1.2 ↗ | a/b three-layered sandwiches › C-terminal subdomain in Lon-related proteases catalytic domains › C-terminal subdomain in Lon-related proteases catalytic domains › C-terminal subdomain in Lon-related proteases catalytic domains › Lon_C | 0.53 | 48.0 | 4.62e-01 | 100.0% | 98.1% |
| 4958933 | 2004.1.1.1217 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF7125 | 0.53 | 47.0 | 3.93e-01 | 97.1% | 73.1% |
| 5049163 | 7529.1.1.1 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro | 0.53 | 43.0 | 4.12e-01 | 89.7% | 80.6% |
| 2070988 | 7512.1.1.6 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 | 0.53 | 48.0 | 4.03e-01 | 100.0% | 70.1% |
| 3957732 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.52 | 42.0 | 3.59e-01 | 85.3% | 77.7% |
| 4953981 | 2007.2.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_5 | 0.52 | 46.0 | 4.44e-01 | 100.0% | 96.9% |
| 3506929 | 2005.1.1.36 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 | 0.52 | 45.0 | 3.58e-01 | 100.0% | 99.0% |
| 4940907 | 7573.1.1.2 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran_N | 0.52 | 44.0 | 4.32e-01 | 92.6% | 91.3% |
| 4864750 | 7529.1.1.1 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro | 0.51 | 42.0 | 3.89e-01 | 89.7% | 82.6% |
| 158152 | 7514.1.1.1 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 | 0.51 | 38.0 | 3.67e-01 | 96.3% | 68.1% |
| 5012557 | 2004.1.1.95 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF257 | 0.51 | 42.0 | 3.77e-01 | 92.6% | 68.0% |
D2
high
residues 158-209
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5cb1A02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.78 | 63.0 | 5.91e-01 | 100.0% | 73.0% |
| 4bxoB02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.78 | 69.0 | 6.44e-01 | 100.0% | 84.6% |
| 3zdbA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.76 | 68.0 | 5.65e-01 | 100.0% | 65.2% |
| 2bgwA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.75 | 64.0 | 5.79e-01 | 100.0% | 73.0% |
| 1bvsA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.73 | 63.0 | 5.76e-01 | 100.0% | 81.4% |
| 1cukA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.71 | 59.0 | 5.36e-01 | 100.0% | 75.0% |
| 2l4eA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.64 | 47.0 | 4.66e-01 | 92.3% | 75.4% |
| 4wp2A00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.58 | 48.0 | 4.63e-01 | 96.2% | 88.5% |
| 7vwtA01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.55 | 44.0 | 2.84e-01 | 100.0% | 52.1% |
| 3rrwB01 | 1.10.520.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › | 0.52 | 38.0 | 2.73e-01 | 80.8% | 85.2% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3170374 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.86 | 76.0 | 6.58e-01 | 100.0% | 72.5% |
| 3785675 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.85 | 75.0 | 6.83e-01 | 100.0% | 85.7% |
| 4669189 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.82 | 71.0 | 6.33e-01 | 100.0% | 78.7% |
| 3847449 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.80 | 71.0 | 6.15e-01 | 100.0% | 71.2% |
| 3830977 | 102.1.1.122 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › PF28629 | 0.79 | 69.0 | 6.18e-01 | 100.0% | 80.0% |
| 3619139 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.79 | 69.0 | 6.27e-01 | 100.0% | 94.3% |
| 3990326 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.78 | 68.0 | 5.54e-01 | 100.0% | 71.0% |
| 1095162 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.78 | 69.0 | 6.31e-01 | 100.0% | 79.7% |
| 4945738 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.78 | 69.0 | 6.27e-01 | 100.0% | 81.4% |
| 4941530 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.78 | 69.0 | 6.10e-01 | 100.0% | 76.0% |
| 3927253 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.78 | 67.0 | 6.03e-01 | 100.0% | 97.3% |
| 3601967 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.78 | 67.0 | 5.99e-01 | 98.1% | 72.0% |
| 4141107 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.78 | 69.0 | 5.99e-01 | 100.0% | 67.5% |
| 5071974 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.78 | 69.0 | 6.57e-01 | 100.0% | 95.0% |
| 5053952 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.77 | 68.0 | 6.07e-01 | 100.0% | 78.1% |
| 4997394 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.77 | 67.0 | 6.26e-01 | 100.0% | 83.1% |
| 4974337 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.77 | 67.0 | 5.98e-01 | 100.0% | 72.0% |
| 4948197 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.76 | 66.0 | 6.23e-01 | 100.0% | 87.7% |
| 4981590 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.76 | 67.0 | 6.46e-01 | 100.0% | 95.0% |
| 4998924 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.76 | 66.0 | 6.10e-01 | 100.0% | 83.8% |
| 3937502 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.76 | 66.0 | 5.68e-01 | 100.0% | 67.1% |
| 2961 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.76 | 66.0 | 6.11e-01 | 100.0% | 83.8% |
| 4985432 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.76 | 66.0 | 5.93e-01 | 100.0% | 78.1% |
| 3620949 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.76 | 65.0 | 5.97e-01 | 100.0% | 81.4% |
| 4975697 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.76 | 65.0 | 5.99e-01 | 100.0% | 77.1% |
| 5067510 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.75 | 65.0 | 5.97e-01 | 100.0% | 81.4% |
| 5058256 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.75 | 65.0 | 6.09e-01 | 100.0% | 87.7% |
| 5073926 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.75 | 63.0 | 5.57e-01 | 100.0% | 91.3% |
| 3315573 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.75 | 63.0 | 6.09e-01 | 98.1% | 95.0% |
| 5041963 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.75 | 65.0 | 5.54e-01 | 100.0% | 67.1% |
| 3357529 | 2008.1.1.120 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HHH_5 | 0.74 | 64.0 | 4.26e-01 | 100.0% | 26.5% |
| 3823728 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.74 | 63.0 | 5.47e-01 | 100.0% | 67.1% |
| 4989597 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.74 | 61.0 | 5.30e-01 | 100.0% | 64.4% |
| 5042901 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.74 | 64.0 | 5.59e-01 | 100.0% | 88.7% |
| 3327499 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.74 | 63.0 | 5.83e-01 | 100.0% | 81.4% |
| 5061085 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.74 | 64.0 | 6.13e-01 | 100.0% | 96.7% |
| None | — | 0.73 | 62.0 | 5.88e-01 | 100.0% | 89.2% | |
| 4209900 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.73 | 62.0 | 5.85e-01 | 100.0% | 89.2% |
| 4148402 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.73 | 62.0 | 5.45e-01 | 100.0% | 72.5% |
| 3971169 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.72 | 61.0 | 4.80e-01 | 100.0% | 49.2% |
| 4970811 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.72 | 62.0 | 5.59e-01 | 100.0% | 70.7% |
| 4058889 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.72 | 61.0 | 5.87e-01 | 98.1% | 93.3% |
| 4213972 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.72 | 62.0 | 5.36e-01 | 100.0% | 67.1% |
| 4312504 | 102.1.1.3 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH | 0.72 | 61.0 | 5.70e-01 | 100.0% | 83.8% |
| 5041781 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.72 | 62.0 | 5.84e-01 | 100.0% | 87.7% |
| 1786533 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.72 | 59.0 | 5.84e-01 | 100.0% | 100.0% |
| None | — | 0.71 | 62.0 | 5.65e-01 | 100.0% | 81.4% |