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IMGVR_UViG_3300038312_000228-3300038312-Ga0134836_002367_5047_5364
Arc-VirIMGVR_UViG_3300038312_000228-3300038312-Ga0134836_002367_5047_5364
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-97
Domain cluster:
rep: JN880423.1__AFJ21461.1__X__00006__D19-112
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3s9xA00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.81 | 74.0 | 6.16e-01 | 100.0% | 76.7% |
| 1t62B00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.79 | 73.0 | 6.04e-01 | 100.0% | 73.6% |
| 1s04A00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.77 | 70.0 | 6.69e-01 | 100.0% | 93.6% |
| 2kkuA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.73 | 67.0 | 5.85e-01 | 100.0% | 77.7% |
| 5i7pA02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.73 | 37.0 | 5.07e-01 | 87.4% | 97.9% |
| 1v6zA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.71 | 40.0 | 4.81e-01 | 100.0% | 83.1% |
| 2cg7A01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.69 | 29.0 | 3.98e-01 | 98.9% | 78.3% |
| 2q07A03 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.66 | 41.0 | 4.80e-01 | 100.0% | 89.4% |
| 2wzpR01 | 2.30.300.20 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Phage tail base-plate attachment protein, domain D1/D2 | 0.66 | 45.0 | 3.54e-01 | 100.0% | 34.7% |
| 4p5nA00 | 2.30.30.1060 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 34.0 | 3.84e-01 | 77.9% | 71.6% |
| 2lwyA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.56 | 43.0 | 3.83e-01 | 82.1% | 87.0% |
| 4dz6A00 | 3.30.70.141 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleoside diphosphate kinase-like domain | 0.55 | 44.0 | 3.65e-01 | 88.4% | 48.8% |
| 3ne5C02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.53 | 39.0 | 3.82e-01 | 100.0% | 71.6% |
| 4d70A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.53 | 47.0 | 4.01e-01 | 100.0% | 74.4% |
| 5escA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 46.0 | 4.29e-01 | 100.0% | 81.5% |
| 3ec4B00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 45.0 | 3.50e-01 | 100.0% | 87.9% |
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 44.0 | 3.93e-01 | 100.0% | 83.8% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3603398 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.93 | 89.0 | 8.42e-01 | 100.0% | 98.2% |
| 5070577 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.85 | 79.0 | 7.51e-01 | 100.0% | 92.7% |
| 5077279 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.84 | 79.0 | 7.22e-01 | 100.0% | 80.8% |
| 5042221 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.84 | 78.0 | 7.56e-01 | 100.0% | 93.3% |
| 4954540 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.83 | 77.0 | 7.35e-01 | 100.0% | 90.0% |
| 4019865 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.83 | 77.0 | 6.59e-01 | 100.0% | 79.3% |
| 4990496 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.83 | 77.0 | 7.19e-01 | 100.0% | 84.3% |
| 4972120 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.82 | 76.0 | 7.23e-01 | 100.0% | 89.1% |
| 4995779 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.82 | 76.0 | 6.45e-01 | 100.0% | 95.9% |
| 4972117 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.82 | 76.0 | 6.95e-01 | 100.0% | 84.2% |
| 5022429 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.82 | 76.0 | 6.85e-01 | 100.0% | 79.2% |
| 4998591 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.82 | 75.0 | 6.46e-01 | 100.0% | 82.1% |
| 5006048 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.81 | 74.0 | 7.06e-01 | 100.0% | 84.5% |
| 5078127 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.81 | 65.0 | 6.88e-01 | 85.3% | 95.3% |
| 4953076 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.81 | 74.0 | 6.86e-01 | 100.0% | 88.3% |
| 4982523 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.80 | 74.0 | 6.91e-01 | 100.0% | 85.2% |
| 3165125 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.80 | 74.0 | 7.20e-01 | 100.0% | 92.4% |
| 3944719 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.79 | 73.0 | 6.38e-01 | 100.0% | 76.3% |
| 4958692 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.79 | 73.0 | 6.18e-01 | 100.0% | 81.3% |
| 5023996 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.79 | 72.0 | 6.79e-01 | 100.0% | 92.0% |
| 5032025 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.76 | 59.0 | 5.76e-01 | 100.0% | 74.3% |
| 4940646 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.76 | 63.0 | 6.45e-01 | 98.9% | 92.2% |
| 4608277 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.76 | 70.0 | 6.28e-01 | 100.0% | 96.2% |
| 4549698 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.72 | 37.0 | 3.78e-01 | 78.9% | 49.5% |
| 5000162 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.69 | 60.0 | 5.81e-01 | 96.8% | 100.0% |
| 3730835 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.69 | 33.0 | 3.39e-01 | 78.9% | 46.3% |
| 4981269 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 46.0 | 4.64e-01 | 100.0% | 69.5% |
| 3942928 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.66 | 48.0 | 5.07e-01 | 100.0% | 85.9% |
| 5040464 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 45.0 | 4.59e-01 | 100.0% | 70.5% |
| 4997059 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.64 | 34.0 | 3.83e-01 | 100.0% | 65.3% |
| 5054112 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 35.0 | 4.18e-01 | 77.9% | 81.5% |
| 4192972 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.60 | 48.0 | 4.67e-01 | 100.0% | 77.1% |
| 4956935 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.59 | 48.0 | 4.61e-01 | 98.9% | 74.5% |
| 5080510 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.59 | 38.0 | 3.87e-01 | 91.6% | 66.3% |
| 4975825 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.59 | 52.0 | 4.55e-01 | 100.0% | 78.5% |
| 4988604 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.58 | 47.0 | 4.48e-01 | 100.0% | 74.5% |
| 4172447 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 35.0 | 3.93e-01 | 96.8% | 77.3% |
| 5015822 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.57 | 46.0 | 4.40e-01 | 100.0% | 73.6% |
| 4946578 | 1.1.7.140 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF87 | 0.57 | 49.0 | 4.49e-01 | 100.0% | 73.3% |
| 3599865 | 304.34.1.0 ↗ | a+b two layers › Alpha-beta plaits › Nucleoside diphosphate kinases › Nucleoside diphosphate kinases | 0.57 | 45.0 | 3.48e-01 | 87.4% | 38.6% |
| 4934423 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 46.0 | 4.37e-01 | 100.0% | 75.5% |
| 4868829 | 290.1.1.1 ↗ | beta barrels › Sortase › Sortase › Sortase › Sortase | 0.56 | 50.0 | 4.61e-01 | 100.0% | 98.4% |
| 4928053 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 45.0 | 4.19e-01 | 100.0% | 70.0% |
| 5064148 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 46.0 | 4.40e-01 | 100.0% | 78.2% |
| 3717930 | 304.34.1.1 ↗ | a+b two layers › Alpha-beta plaits › Nucleoside diphosphate kinases › Nucleoside diphosphate kinases › NDK | 0.55 | 44.0 | 3.35e-01 | 87.4% | 37.3% |
| 5028172 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 46.0 | 4.28e-01 | 100.0% | 73.3% |
| 5078822 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.54 | 46.0 | 4.35e-01 | 98.9% | 76.5% |
| 4931265 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 46.0 | 4.26e-01 | 100.0% | 73.3% |
| 3492680 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.54 | 45.0 | 4.08e-01 | 87.4% | 73.3% |
| 4947591 | 1.1.7.140 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF87 | 0.53 | 46.0 | 4.29e-01 | 100.0% | 77.4% |
| 3882604 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.53 | 42.0 | 3.08e-01 | 86.3% | 46.4% |
| 5047619 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 47.0 | 4.25e-01 | 100.0% | 71.5% |
| 5031599 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 47.0 | 4.15e-01 | 97.9% | 68.9% |
| 5011662 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 47.0 | 4.05e-01 | 100.0% | 72.0% |
| 4552243 | 2003.1.5.30 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_7 | 0.52 | 41.0 | 2.78e-01 | 86.3% | 50.0% |
| 5072025 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.51 | 47.0 | 4.28e-01 | 100.0% | 76.0% |
| 5053822 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 46.0 | 4.14e-01 | 100.0% | 72.3% |
| 4943928 | 1.1.7.140 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF87 | 0.51 | 47.0 | 4.20e-01 | 100.0% | 76.9% |
| 4433128 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.50 | 44.0 | 4.41e-01 | 100.0% | 94.7% |