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IMGVR_UViG_3300038313_000213-3300038313-Ga0134846_000572_12678_13151

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300038313_000213-3300038313-Ga0134846_000572_12678_13151 ↗
Kingdom:: archaea

Quality

74.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 11-48_117-132

PDB

Domain cluster: representative

CATH (12)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2ccyA00	1.20.120.10	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562	0.66	45.0	3.41e-01	88.9%	29.9%
1u97A00	1.10.287.1130	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › CytochromE C oxidase copper chaperone	0.65	36.0	3.34e-01	81.5%	42.0%
1wgwA00	1.20.120.140	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain	0.60	45.0	3.73e-01	83.3%	67.7%
2y39A00	1.20.120.1490	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.59	46.0	3.61e-01	85.2%	54.5%
2w9mB01	1.10.150.110	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like	0.59	41.0	3.62e-01	75.9%	95.3%
1ad6A00	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.58	46.0	3.28e-01	92.6%	54.1%
3k6hA01	3.40.109.10	Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase	0.58	46.0	3.32e-01	90.7%	38.9%
3zssA02	1.20.58.80	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit	0.56	46.0	4.13e-01	94.4%	84.8%
6srbA02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.56	47.0	3.82e-01	98.1%	75.2%
2p0vA01	1.50.10.10	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase ›	0.55	48.0	2.85e-01	100.0%	63.2%
2cazC00	1.10.287.660	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.53	39.0	3.80e-01	85.2%	89.1%
1gaxA05	1.10.287.380	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain	0.52	45.0	4.12e-01	98.1%	72.6%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4213046	605.1.1.1 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA	0.67	52.0	4.93e-01	85.2%	81.5%
3852430	109.1.1.1 ↗	alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C	0.66	53.0	3.67e-01	96.3%	59.0%
3659300	3861.1.1.1 ↗	alpha bundles › Mitochondrial translocator protein (TSPO) › Mitochondrial translocator protein (TSPO) › Mitochondrial translocator protein (TSPO) › TspO_MBR	0.64	46.0	3.34e-01	81.5%	27.5%
3195418	192.8.1.376 ↗	alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › RRP36	0.62	50.0	4.12e-01	88.9%	71.6%
3386973	5086.1.1.84 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND	0.59	44.0	3.75e-01	81.5%	61.1%
4949254	4177.1.1.0 ↗	alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like	0.58	44.0	3.18e-01	87.0%	84.8%
3947564	605.1.1.4 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3	0.56	42.0	4.03e-01	83.3%	80.0%
3280999	101.1.2.135 ↗	alpha arrays › HTH › HTH › winged helix domain › MarR_2	0.56	40.0	2.99e-01	85.2%	27.7%