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IMGVR_UViG_3300038313_000213-3300038313-Ga0134846_000572_25288_25863

Arc-Vir

IMGVR_UViG_3300038313_000213-3300038313-Ga0134846_000572_25288_25863

Quality

86.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-61
PDB
Domain cluster: representative
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5058137 2484.1.1.8 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK 0.55 45.0 3.02e-01 94.0% 38.6%
4587267 3476.1.1.1 alpha arrays › RecQL4 helicase N-terminal domain › RecQL4 helicase N-terminal domain › RecQL4 helicase N-terminal domain › Drc1-Sld2 0.53 35.0 3.65e-01 82.0% 73.3%
3316795 101.1.1.303 alpha arrays › HTH › HTH › Three-helical HTH › PF25896 0.51 35.0 3.42e-01 70.0% 67.3%
D2 high residues 69-177
PDB
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zelA01 3.90.56.20 Alpha Beta › Alpha-Beta Complex › Phenol Hydroxylase P2 Protein › replication protein C, winged helix domain 0.81 49.0 5.20e-01 96.3% 67.3%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 51.0 5.21e-01 100.0% 75.2%
2l2oA00 1.10.10.1540 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain 0.70 52.0 5.86e-01 98.2% 100.0%
5f7qC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 44.0 5.38e-01 92.7% 100.0%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 44.0 4.91e-01 96.3% 82.4%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 45.0 5.20e-01 98.2% 96.0%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 47.0 4.80e-01 97.2% 73.3%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 47.0 4.97e-01 96.3% 81.2%
7jgsG02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 48.0 5.05e-01 94.5% 82.7%
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 43.0 4.70e-01 100.0% 80.9%
3gz5B02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 40.0 4.67e-01 91.7% 90.5%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 46.0 4.70e-01 99.1% 78.6%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 46.0 4.69e-01 99.1% 77.1%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 44.0 4.40e-01 99.1% 69.6%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 45.0 4.51e-01 97.2% 71.3%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 46.0 4.79e-01 100.0% 81.6%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 45.0 4.59e-01 98.2% 76.4%
2krhA00 1.10.10.1540 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain 0.62 41.0 4.56e-01 90.8% 85.9%
4g6qA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 41.0 4.54e-01 99.1% 85.1%
5deqB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 42.0 4.71e-01 97.2% 91.6%
2mbfA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 46.0 4.88e-01 97.2% 91.8%
4p55B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 46.0 4.90e-01 88.1% 100.0%
3buxB02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.57 35.0 3.76e-01 89.0% 71.9%
1bm9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 45.0 4.36e-01 100.0% 75.8%
6n9gA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 46.0 4.75e-01 97.2% 94.0%
3u1dB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 48.0 4.36e-01 100.0% 88.1%
2lfcA00 3.90.700.10 Alpha Beta › Alpha-Beta Complex › Flavocytochrome C3; Chain A, domain 1 › Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 0.53 44.0 3.95e-01 94.5% 93.8%
5a4eC00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.52 40.0 3.02e-01 80.7% 55.1%
4ctaA02 3.30.70.2860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 28.0 3.17e-01 70.6% 70.7%
4mt1A07 3.30.70.1440 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain 0.51 37.0 3.87e-01 89.0% 81.4%
1repC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 40.0 4.27e-01 96.3% 100.0%
4ebrA00 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.50 39.0 3.54e-01 85.3% 80.9%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 45.0 4.07e-01 100.0% 72.0%
3fo3A02 1.10.1130.10 Mainly Alpha › Orthogonal Bundle › Flavocytochrome C3; Chain A, domain 2 › Flavocytochrome C3; Chain A 0.50 39.0 2.79e-01 84.4% 54.6%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4940432 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 52.0 5.69e-01 95.4% 86.7%
5018482 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 65.0 6.74e-01 95.4% 100.0%
3797719 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 52.0 5.16e-01 100.0% 71.3%
5030617 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 46.0 4.84e-01 95.4% 71.0%
3587554 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.71 50.0 5.17e-01 98.2% 78.0%
4949577 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 51.0 5.41e-01 100.0% 85.3%
143797 101.1.2.149 alpha arrays › HTH › HTH › winged helix domain › Costars 0.71 51.0 5.81e-01 95.4% 100.0%
1883335 101.1.2.174 alpha arrays › HTH › HTH › winged helix domain › HTH_56 0.71 60.0 6.20e-01 98.2% 95.2%
4997255 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 52.0 5.39e-01 100.0% 83.0%
3393722 101.1.2.149 alpha arrays › HTH › HTH › winged helix domain › Costars 0.71 54.0 5.14e-01 100.0% 69.6%
3670440 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.70 50.0 5.42e-01 100.0% 88.9%
4975130 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.70 47.0 5.05e-01 97.2% 80.0%
5026539 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 49.0 5.31e-01 96.3% 87.8%
3944118 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 49.0 5.34e-01 99.1% 88.9%
5050784 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 49.0 5.38e-01 100.0% 90.0%
5025840 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 52.0 5.37e-01 100.0% 86.0%
3936891 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 49.0 5.21e-01 96.3% 85.3%
3986740 101.1.2.380 alpha arrays › HTH › HTH › winged helix domain › TraI_hel_assoc_N 0.68 47.0 3.32e-01 96.3% 22.6%
3988732 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.68 47.0 4.75e-01 97.2% 71.3%
4379440 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.68 47.0 4.63e-01 99.1% 67.0%
4498408 101.1.2.171 alpha arrays › HTH › HTH › winged helix domain › HTH_52 0.68 41.0 5.01e-01 93.6% 100.0%
3287678 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.68 45.0 5.11e-01 93.6% 91.3%
4947062 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 48.0 5.08e-01 100.0% 84.2%
4984063 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 47.0 4.98e-01 99.1% 82.1%
3286028 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.67 44.0 5.11e-01 96.3% 97.3%
5001098 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 48.0 5.26e-01 100.0% 91.1%
4939871 101.1.2.896 alpha arrays › HTH › HTH › winged helix domain › DUF2551 0.67 46.0 4.71e-01 100.0% 73.3%
3581762 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 50.0 5.08e-01 99.1% 81.0%
4304354 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.67 43.0 5.09e-01 93.6% 100.0%
5065252 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 44.0 4.55e-01 98.2% 72.0%
4547759 101.1.2.21 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.66 42.0 5.07e-01 93.6% 100.0%
4251909 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 43.0 4.81e-01 93.6% 84.7%
4957685 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 42.0 4.49e-01 97.2% 73.7%
4966185 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.66 46.0 4.89e-01 100.0% 82.1%
5082509 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.66 46.0 4.37e-01 94.5% 60.8%
4958040 101.1.2.896 alpha arrays › HTH › HTH › winged helix domain › DUF2551 0.66 47.0 4.99e-01 100.0% 85.3%
5045747 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 45.0 4.88e-01 95.4% 85.6%
4966215 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 46.0 3.97e-01 100.0% 47.9%
3810002 101.1.2.111 alpha arrays › HTH › HTH › winged helix domain › RQC 0.65 49.0 4.94e-01 99.1% 79.1%
5029778 101.1.2.43 alpha arrays › HTH › HTH › winged helix domain › Pox_D5 0.65 46.0 5.05e-01 95.4% 90.0%
5035685 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.65 48.0 4.59e-01 98.2% 67.7%
3688358 101.1.2.34 alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.65 45.0 5.08e-01 97.2% 97.5%
4994432 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 45.0 4.62e-01 100.0% 74.3%
3407920 101.1.2.73 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82 0.64 47.0 4.93e-01 94.5% 84.0%
5064866 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 46.0 4.66e-01 100.0% 74.5%
4970916 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 45.0 4.61e-01 100.0% 76.2%
5064203 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 44.0 4.72e-01 100.0% 85.6%
2056399 101.1.2.213 alpha arrays › HTH › HTH › winged helix domain › NrtR_WHD 0.63 39.0 4.55e-01 89.0% 89.5%
5079485 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 45.0 4.65e-01 100.0% 80.0%
5035522 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 44.0 4.56e-01 99.1% 77.1%
5027566 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 43.0 4.71e-01 99.1% 90.6%
3246909 101.1.2.73 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82 0.62 45.0 4.74e-01 96.3% 84.0%
4998735 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 52.0 4.81e-01 99.1% 72.6%
3630104 192.24.1.6 alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD 0.62 49.0 3.33e-01 100.0% 24.2%
3735293 101.1.2.312 alpha arrays › HTH › HTH › winged helix domain › MSC 0.61 49.0 3.69e-01 100.0% 35.8%
2056822 101.1.2.213 alpha arrays › HTH › HTH › winged helix domain › NrtR_WHD 0.61 39.0 4.43e-01 89.0% 90.8%
3788727 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.60 49.0 4.52e-01 100.0% 67.9%
3278037 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.60 43.0 3.55e-01 100.0% 41.5%
4014683 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.60 49.0 4.68e-01 100.0% 74.6%
3481547 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.60 50.0 4.48e-01 95.4% 65.3%
4957324 101.1.2.920 alpha arrays › HTH › HTH › winged helix domain › HTH_TbsP_C 0.59 46.0 4.42e-01 100.0% 72.0%
3930041 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 49.0 5.08e-01 98.2% 94.0%
4978855 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.59 43.0 4.25e-01 98.2% 70.0%
5011622 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 41.0 4.41e-01 100.0% 86.0%
3257174 101.1.2.148 alpha arrays › HTH › HTH › winged helix domain › ORC5_C 0.56 50.0 4.74e-01 100.0% 83.1%
3281879 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.55 41.0 3.50e-01 95.4% 47.2%
4951775 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 45.0 4.52e-01 100.0% 87.3%
3306699 101.1.2.517 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD 0.54 49.0 3.34e-01 100.0% 63.7%
3926827 101.1.2.394 alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.54 47.0 2.98e-01 97.2% 20.7%
5050621 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 48.0 3.87e-01 100.0% 93.3%