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IMGVR_UViG_3300038313_000238-3300038313-Ga0134846_001011_24364_24954
Arc-VirIMGVR_UViG_3300038313_000238-3300038313-Ga0134846_001011_24364_24954
Identity
- Kingdom:
- archaea
Quality
72.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 27-106
Domain cluster:
rep: IMGVR_UViG_3300038316_000169-3300038316-Ga0134847_000580_31525_32526__D175-240
D2
medium
residues 107-160
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vw4T01 | 6.10.330.20 | Special › Helix non-globular › Monooxygenase › | 0.80 | 56.0 | 4.34e-01 | 74.1% | 36.6% |
| 1f45B00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.78 | 59.0 | 4.38e-01 | 81.5% | 49.6% |
| 3bc8A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.73 | 64.0 | 4.75e-01 | 100.0% | 91.3% |
| 4g6dB02 | 6.10.140.1800 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 59.0 | 5.17e-01 | 90.7% | 64.2% |
| 1dn1B00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 65.0 | 4.22e-01 | 100.0% | 31.5% |
| 1khvA03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.71 | 62.0 | 4.62e-01 | 96.3% | 43.8% |
| 2nr7A00 | 1.20.141.10 | Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 | 0.71 | 57.0 | 3.77e-01 | 90.7% | 23.7% |
| 2fi1A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.70 | 50.0 | 4.74e-01 | 75.9% | 81.2% |
| 3lkdB01 | 1.20.1260.30 | Mainly Alpha › Up-down Bundle › Ferritin › N6 adenine-specific DNA methyltransferase, N-terminal domain | 0.70 | 57.0 | 3.90e-01 | 88.9% | 51.4% |
| 4neoA00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.69 | 52.0 | 4.44e-01 | 79.6% | 90.4% |
| 1akqA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.67 | 52.0 | 3.81e-01 | 85.2% | 90.5% |
| 1v1gA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.66 | 47.0 | 3.24e-01 | 75.9% | 33.0% |
| 4zohA05 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.66 | 59.0 | 4.22e-01 | 98.1% | 37.7% |
| 3k7lA01 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.65 | 55.0 | 3.74e-01 | 94.4% | 72.1% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.64 | 50.0 | 3.81e-01 | 87.0% | 56.7% |
| 2wa5A01 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.64 | 44.0 | 3.65e-01 | 74.1% | 100.0% |
| 2qbyA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 46.0 | 3.21e-01 | 77.8% | 78.6% |
| 2yqzA02 | 1.10.8.900 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.60 | 42.0 | 3.95e-01 | 75.9% | 77.9% |
| 3fm5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 50.0 | 3.74e-01 | 98.1% | 79.2% |
| 3gb0A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.56 | 47.0 | 3.09e-01 | 96.3% | 90.8% |
| 3b40A02 | 1.10.287.650 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › L27 domain | 0.56 | 40.0 | 3.95e-01 | 75.9% | 91.4% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3654060 | 3722.1.1.1 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › MAP65_ASE1 | 0.83 | 75.0 | 4.86e-01 | 100.0% | 30.1% |
| 3805676 | 1128.1.1.13 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › PF30094 | 0.80 | 72.0 | 6.05e-01 | 100.0% | 81.1% |
| 5023893 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.78 | 70.0 | 4.51e-01 | 100.0% | 28.9% |
| 4941976 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.78 | 68.0 | 5.39e-01 | 100.0% | 95.5% |
| 4848531 | 109.3.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank | 0.72 | 55.0 | 3.30e-01 | 79.6% | 17.4% |
| 3314636 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.71 | 52.0 | 3.49e-01 | 79.6% | 22.9% |
| 5054502 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.68 | 56.0 | 4.57e-01 | 90.7% | 95.0% |
| 5048383 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.67 | 59.0 | 3.70e-01 | 100.0% | 29.3% |
| 3470194 | 148.1.3.17 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid | 0.66 | 54.0 | 4.32e-01 | 90.7% | 65.7% |
| 5062294 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.65 | 57.0 | 3.59e-01 | 100.0% | 27.7% |
| 3464778 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.56 | 46.0 | 4.01e-01 | 94.4% | 91.8% |