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IMGVR_UViG_3300038313_000401-3300038313-Ga0134846_003250_4252_4746

Arc-Vir

IMGVR_UViG_3300038313_000401-3300038313-Ga0134846_003250_4252_4746

Quality

77.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-95
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1v5oA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.65 46.0 4.30e-01 75.3% 76.5%
6hogA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.63 52.0 4.54e-01 90.1% 87.0%
1bmlC03 3.10.20.150 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.63 45.0 4.51e-01 75.3% 96.4%
2bw2A01 3.10.20.420 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Bypass-of-forespore C, N-terminal domain 0.62 39.0 4.69e-01 72.8% 94.5%
2pmvA02 2.170.130.30 Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › 0.62 45.0 4.06e-01 75.3% 97.2%
4dbgA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.62 43.0 4.33e-01 72.8% 92.7%
4b6wA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.61 42.0 4.21e-01 72.8% 93.0%
4bfrB02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.60 44.0 3.86e-01 79.0% 67.2%
3ng0A01 3.10.20.70 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain 0.60 43.0 3.97e-01 74.1% 75.7%
4lniJ01 3.10.20.70 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain 0.60 42.0 3.92e-01 74.1% 76.0%
3u7zA00 2.170.130.30 Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › 0.59 42.0 3.96e-01 74.1% 94.8%
1e7uA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.59 43.0 3.49e-01 79.0% 49.1%
1wjuA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.59 42.0 3.99e-01 76.5% 78.0%
4o1nD01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.59 42.0 3.78e-01 75.3% 83.5%
5zliA01 3.10.20.70 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain 0.59 41.0 3.82e-01 74.1% 85.8%
2qmlA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 41.0 3.14e-01 72.8% 54.9%
1z2mA02 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.58 41.0 4.19e-01 74.1% 93.5%
6dddH00 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.58 50.0 4.83e-01 100.0% 97.8%
1feuA01 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.58 49.0 4.83e-01 100.0% 95.6%
1dfuP00 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.57 49.0 4.75e-01 100.0% 96.8%
5dm6S01 2.40.240.10 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P 0.57 49.0 4.84e-01 98.8% 98.8%
1wggA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.56 38.0 3.97e-01 71.6% 95.9%
1zpsA01 3.10.20.810 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphoribosyl-AMP cyclohydrolase 0.56 42.0 4.05e-01 82.7% 84.2%
3i57A01 3.10.20.470 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.55 39.0 4.03e-01 75.3% 98.7%
1r94A00 2.60.300.12 Mainly Beta › Sandwich › Hypothetical Protein Aq_1857; Chain: A; › HesB-like domain 0.52 37.0 3.55e-01 82.7% 62.9%
4je3B00 3.10.20.720 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.52 37.0 3.79e-01 74.1% 81.8%
6kryA01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.51 45.0 3.83e-01 100.0% 82.6%
3u6uC00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.51 43.0 3.12e-01 98.8% 57.5%
ECOD (77)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3694098 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.66 47.0 4.12e-01 74.1% 92.5%
3786778 221.1.1.68 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ATG5_UblA 0.64 44.0 3.85e-01 72.8% 71.5%
4955866 239.4.1.1 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N 0.63 44.0 4.32e-01 74.1% 77.8%
3258650 239.4.1.0 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain 0.62 44.0 4.54e-01 74.1% 83.3%
4071928 239.4.1.0 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain 0.62 44.0 3.98e-01 74.1% 81.8%
3499258 221.1.1.168 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd, PI3K_p85B 0.62 44.0 3.00e-01 75.3% 33.3%
3958520 239.4.1.0 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain 0.62 43.0 3.97e-01 74.1% 76.4%
2557339 239.4.1.1 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N 0.62 43.0 3.97e-01 74.1% 72.2%
3910146 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.61 43.0 4.35e-01 72.8% 91.3%
2889689 239.4.1.1 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N 0.61 43.0 4.06e-01 74.1% 79.0%
4859000 239.4.1.1 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N 0.61 43.0 3.88e-01 74.1% 88.5%
5011560 239.4.1.0 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain 0.61 43.0 3.98e-01 74.1% 78.1%
4230721 239.4.1.1 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N 0.60 43.0 4.10e-01 74.1% 82.1%
4344650 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.60 52.0 4.95e-01 100.0% 94.0%
4259249 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.60 52.0 4.97e-01 100.0% 96.8%
2391550 239.4.1.1 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N 0.60 42.0 3.88e-01 74.1% 72.9%
3385880 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.60 51.0 5.02e-01 100.0% 98.9%
4873157 239.4.1.1 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N 0.60 42.0 3.88e-01 74.1% 84.8%
3904507 221.1.1.60 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_5 0.59 47.0 4.64e-01 90.1% 100.0%
5024396 239.4.1.1 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N 0.59 41.0 3.92e-01 74.1% 80.0%
4197939 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.59 51.0 4.90e-01 100.0% 94.7%
4197235 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.59 51.0 4.87e-01 100.0% 94.7%
4323001 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.59 50.0 4.78e-01 100.0% 93.0%
4139867 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.59 51.0 4.87e-01 100.0% 94.7%
4232299 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.59 51.0 4.87e-01 100.0% 96.8%
4670852 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.59 50.0 4.82e-01 100.0% 94.7%
3332553 239.1.1.0 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.59 50.0 4.52e-01 100.0% 94.2%
3404763 226.1.1.1 a+b two layers › POZ domain › POZ domain › POZ domain › BTB 0.59 44.0 4.01e-01 85.2% 59.6%
4597893 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.59 50.0 4.75e-01 100.0% 92.0%
4672167 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.59 50.0 4.82e-01 100.0% 92.6%
4129323 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.59 50.0 4.83e-01 100.0% 95.8%
4065495 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.58 50.0 4.75e-01 100.0% 91.0%
4080757 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.58 50.0 4.79e-01 100.0% 94.7%
3665538 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.58 50.0 4.52e-01 100.0% 93.9%
4065090 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.58 49.0 4.78e-01 100.0% 95.8%
4265687 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.58 50.0 4.78e-01 100.0% 95.8%
3286692 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.58 50.0 4.72e-01 100.0% 90.0%
4285300 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.58 50.0 4.82e-01 100.0% 94.7%
4188763 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.58 50.0 4.67e-01 100.0% 91.4%
4118502 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.58 50.0 4.77e-01 100.0% 94.7%
4083330 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.58 49.0 4.75e-01 100.0% 93.7%
4433128 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.58 49.0 4.74e-01 100.0% 95.8%
3510186 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.58 50.0 4.79e-01 100.0% 93.7%
4248625 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.58 50.0 4.72e-01 100.0% 93.0%
4246654 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.58 50.0 4.72e-01 100.0% 91.0%
4493865 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.58 49.0 4.65e-01 100.0% 93.0%
3808179 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.58 49.0 4.37e-01 100.0% 96.0%
4681723 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.58 49.0 4.75e-01 100.0% 92.6%
4414535 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.58 49.0 4.68e-01 100.0% 90.0%
4052507 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.58 49.0 4.75e-01 100.0% 94.7%
4886608 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.58 49.0 4.72e-01 100.0% 94.7%
4452931 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.57 49.0 4.60e-01 100.0% 89.5%
4161236 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.57 49.0 4.80e-01 100.0% 100.0%
4037542 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.57 49.0 4.65e-01 100.0% 92.0%
4128879 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.57 49.0 4.72e-01 100.0% 94.7%
4618294 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.57 49.0 4.71e-01 100.0% 94.7%
4601397 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.57 49.0 4.72e-01 100.0% 95.8%
4312484 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.57 49.0 4.56e-01 100.0% 92.4%
4062422 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.57 49.0 4.70e-01 100.0% 95.8%
4568828 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.57 49.0 4.65e-01 100.0% 95.0%
4399696 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.57 49.0 4.69e-01 100.0% 95.8%
3964275 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.57 49.0 4.70e-01 100.0% 95.8%
4564499 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.57 48.0 4.74e-01 100.0% 96.7%
4554927 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.57 48.0 4.61e-01 100.0% 94.0%
4069101 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.57 49.0 4.62e-01 100.0% 91.0%
4668753 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.57 48.0 4.56e-01 100.0% 92.0%
4145938 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.57 48.0 4.57e-01 100.0% 90.0%
4209479 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.56 47.0 4.51e-01 100.0% 91.0%
4120365 239.1.1.3 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p 0.56 47.0 4.49e-01 100.0% 91.0%
4947178 239.2.1.1 beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH 0.56 41.0 3.56e-01 79.0% 61.5%
3450410 11.1.1.389 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EDR2_C 0.55 49.0 3.65e-01 100.0% 71.4%
3260251 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.55 38.0 3.22e-01 74.1% 82.8%
4026863 239.1.1.0 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.54 46.0 4.47e-01 100.0% 100.0%
4976754 221.1.1.16 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › TGS 0.54 40.0 4.03e-01 80.2% 92.9%
4024438 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.54 47.0 4.18e-01 98.8% 80.8%
3972097 304.14.1.0 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) 0.53 38.0 3.90e-01 74.1% 96.0%
3512556 221.1.1.7 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX 0.51 42.0 3.56e-01 96.3% 92.0%
D2 medium residues 114-164
PDB
Domain cluster: representative