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IMGVR_UViG_3300038313_000408-3300038313-Ga0134846_002775_1_609

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300038313_000408-3300038313-Ga0134846_002775_1_609 ↗
Kingdom:: archaea

Quality

81.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 44-186

PDB

Domain cluster: rep: IMGVR_UViG_3300015678_000002-3300015678-Ga0185403_10661961__D36-204

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1h7zA00	2.60.90.10	Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain	0.63	46.0	4.19e-01	75.5%	88.5%
6mw4A01	2.60.120.1290	Mainly Beta › Sandwich › Jelly Rolls ›	0.59	46.0	4.85e-01	98.6%	91.5%
2wstA00	2.60.90.10	Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain	0.55	40.0	3.77e-01	74.8%	86.4%
2l8aA00	2.60.40.710	Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like	0.55	48.0	4.77e-01	100.0%	91.3%
4b96A00	2.60.40.710	Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like	0.55	48.0	4.75e-01	100.0%	91.4%
6sl4A00	2.60.40.710	Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like	0.54	47.0	4.72e-01	100.0%	92.7%
4b97A00	2.60.40.710	Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like	0.54	47.0	4.70e-01	100.0%	92.1%
2zahA02	2.60.40.4030	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.53	40.0	4.24e-01	100.0%	89.8%
2df7A02	2.60.120.660	Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus	0.52	43.0	4.38e-01	100.0%	91.4%
5e4bA00	3.30.530.20	Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain	0.52	39.0	3.69e-01	79.7%	95.5%
3klxB00	3.30.530.20	Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain	0.51	39.0	3.60e-01	79.0%	96.7%
1b23P03	2.40.30.10	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors	0.51	33.0	3.98e-01	80.4%	100.0%
3mcaA03	2.40.30.10	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors	0.51	35.0	4.01e-01	82.5%	99.0%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
140191	5092.1.1.1 ↗	beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Adeno_knob	0.55	40.0	3.77e-01	74.8%	86.4%
3885668	10.32.1.1 ↗	beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Laminin_B	0.54	48.0	4.55e-01	100.0%	89.7%
4537989	12.3.1.24 ↗	beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas	0.53	45.0	3.62e-01	90.9%	83.7%
4934819	10.1.2.0 ↗	beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED)	0.52	42.0	4.41e-01	100.0%	98.4%
5046884	1.1.8.1 ↗	beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3	0.51	32.0	3.88e-01	79.7%	98.9%
5055336	1.1.8.1 ↗	beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3	0.51	32.0	3.86e-01	81.1%	100.0%
3566270	1.1.8.11 ↗	beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C	0.50	32.0	3.82e-01	80.4%	98.9%
5075927	1.1.8.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain	0.50	31.0	3.77e-01	79.7%	98.9%