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IMGVR_UViG_3300038317_000172-3300038317-Ga0134849_002566_10091_10597
Arc-VirIMGVR_UViG_3300038317_000172-3300038317-Ga0134849_002566_10091_10597
Identity
- Kingdom:
- archaea
Quality
82.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 106-168
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x48A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.75 | 46.0 | 4.92e-01 | 88.9% | 72.2% |
| 4a18Q01 | 1.10.10.1760 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L36 | 0.71 | 50.0 | 4.91e-01 | 81.0% | 68.1% |
| 1vw4L02 | 1.10.246.170 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.67 | 59.0 | 5.35e-01 | 98.4% | 80.0% |
| 1x2nA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 49.0 | 5.00e-01 | 84.1% | 83.3% |
| 3e3vA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 48.0 | 5.04e-01 | 79.4% | 83.9% |
| 3dfgA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 44.0 | 4.97e-01 | 85.7% | 93.8% |
| 1jr3C02 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.63 | 53.0 | 4.36e-01 | 96.8% | 91.8% |
| 3r2cA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.61 | 52.0 | 4.12e-01 | 98.4% | 89.1% |
| 4a8eA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.58 | 49.0 | 4.46e-01 | 100.0% | 69.0% |
| 2n1fA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.58 | 46.0 | 4.12e-01 | 87.3% | 89.9% |
| 3jamD02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.58 | 48.0 | 3.75e-01 | 92.1% | 45.9% |
| 2oerA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 50.0 | 3.63e-01 | 98.4% | 52.0% |
| 3dtoA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.56 | 46.0 | 4.14e-01 | 92.1% | 89.8% |
| 7bvaA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.56 | 48.0 | 3.27e-01 | 95.2% | 91.6% |
| 7z7vE01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.55 | 43.0 | 4.45e-01 | 98.4% | 96.7% |
| 1f81A00 | 1.20.1020.10 | Mainly Alpha › Up-down Bundle › CREB-binding Protein; Chain A › TAZ domain | 0.54 | 43.0 | 4.00e-01 | 92.1% | 82.8% |
| 2nr4A02 | 1.20.58.290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. | 0.54 | 42.0 | 4.37e-01 | 93.7% | 91.4% |
| 2w43A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.54 | 40.0 | 4.17e-01 | 82.5% | 93.0% |
| 1f1eA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.53 | 44.0 | 3.44e-01 | 96.8% | 47.7% |
| 1h72C01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.53 | 44.0 | 3.43e-01 | 100.0% | 66.5% |
| 2aamC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 46.0 | 3.04e-01 | 100.0% | 28.3% |
| 3iqtA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.52 | 41.0 | 3.39e-01 | 98.4% | 47.4% |
| 3ma5A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 40.0 | 3.63e-01 | 100.0% | 61.1% |
| 3nbxX03 | 1.20.58.1510 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 42.0 | 3.61e-01 | 92.1% | 79.2% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4180031 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.72 | 50.0 | 5.63e-01 | 85.7% | 92.0% |
| 4378615 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.71 | 50.0 | 5.29e-01 | 84.1% | 83.6% |
| 3672635 | 101.1.1.295 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_70 | 0.71 | 53.0 | 5.03e-01 | 81.0% | 68.0% |
| 4452388 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.70 | 48.0 | 5.34e-01 | 84.1% | 90.0% |
| 4073017 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.70 | 48.0 | 5.08e-01 | 84.1% | 81.8% |
| 3989443 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.69 | 49.0 | 5.08e-01 | 84.1% | 79.3% |
| 4638215 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.69 | 47.0 | 5.23e-01 | 84.1% | 90.0% |
| 4161600 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.69 | 47.0 | 5.27e-01 | 84.1% | 90.0% |
| 4169204 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.69 | 48.0 | 5.10e-01 | 84.1% | 83.6% |
| 4050022 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.68 | 49.0 | 5.21e-01 | 82.5% | 87.3% |
| 4145773 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.68 | 48.0 | 5.12e-01 | 85.7% | 85.5% |
| 4105244 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.68 | 51.0 | 5.24e-01 | 85.7% | 83.3% |
| 4397003 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.68 | 46.0 | 5.03e-01 | 84.1% | 90.0% |
| 4489939 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.67 | 50.0 | 5.15e-01 | 84.1% | 83.3% |
| 4567840 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.67 | 48.0 | 5.06e-01 | 85.7% | 85.5% |
| 4033612 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.67 | 48.0 | 5.25e-01 | 82.5% | 94.0% |
| 1068638 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.67 | 48.0 | 5.04e-01 | 79.4% | 83.9% |
| 3588595 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.67 | 47.0 | 5.00e-01 | 82.5% | 85.5% |
| 4126690 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.64 | 47.0 | 4.94e-01 | 84.1% | 87.3% |
| 4128053 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.64 | 45.0 | 4.78e-01 | 82.5% | 85.5% |
| 3273575 | 193.1.1.1 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › CH | 0.61 | 48.0 | 3.74e-01 | 84.1% | 57.7% |
| 3877844 | 529.1.1.2 ↗ | few secondary structure elements › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › BSMAP | 0.60 | 45.0 | 4.02e-01 | 81.0% | 58.9% |
| 5045511 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.57 | 49.0 | 3.29e-01 | 95.2% | 94.6% |
| 3697375 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.56 | 45.0 | 3.63e-01 | 88.9% | 56.8% |
| 3288004 | 3236.2.1.1 ↗ | alpha complex topology › Cation-proton antiporter › Sodium-dependent citrate symporter › Sodium-dependent citrate symporter › 2HCT | 0.54 | 45.0 | 2.81e-01 | 100.0% | 62.6% |
| 4374417 | 109.4.1.11 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI3Ka | 0.53 | 46.0 | 3.02e-01 | 100.0% | 22.8% |
| 3589159 | 101.1.2.488 ↗ | alpha arrays › HTH › HTH › winged helix domain › DDE_Tnp_IS66 | 0.52 | 37.0 | 3.62e-01 | 79.4% | 77.3% |
| 4166995 | 109.4.1.81 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › eIF-3c_N | 0.51 | 45.0 | 2.96e-01 | 100.0% | 28.1% |