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IMGVR_UViG_3300038317_000196-3300038317-Ga0134849_002335_2484_3395
Arc-VirIMGVR_UViG_3300038317_000196-3300038317-Ga0134849_002335_2484_3395
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 17-59_120-287
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05352.18 best | Phage_connector | 58.0 | 1.50e-15 | 79.6% | 55.5% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3wxmB02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.62 | 23.0 | 2.96e-01 | 92.9% | 54.9% |
| 1wu7A03 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.62 | 14.0 | 2.07e-01 | 87.7% | 38.1% |
| 4ag6D01 | 6.10.140.2170 | Special › Helix non-globular › Helix Hairpins › | 0.56 | 14.0 | 2.37e-01 | 73.5% | 58.2% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3501757 | 4038.1.1.3 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_connector | 0.72 | 66.0 | 6.62e-01 | 98.6% | 96.2% |
| 5004294 | 4038.1.1.0 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein | 0.63 | 57.0 | 5.27e-01 | 98.6% | 88.1% |
| 4676609 | 4038.1.1.10 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Portal_Mu | 0.62 | 57.0 | 4.99e-01 | 97.6% | 87.9% |
| 5083493 | 4038.1.1.0 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein | 0.61 | 55.0 | 4.73e-01 | 98.1% | 83.3% |
| 5039294 | 4038.1.1.1 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal | 0.59 | 53.0 | 4.84e-01 | 95.7% | 85.7% |