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IMGVR_UViG_3300038317_000228-3300038317-Ga0134849_002614_4928_5506
Arc-VirIMGVR_UViG_3300038317_000228-3300038317-Ga0134849_002614_4928_5506
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-106
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2af7D00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.61 | 32.0 | 3.09e-01 | 98.0% | 43.0% |
| 1vw4801 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.58 | 37.0 | 4.22e-01 | 98.0% | 90.4% |
| 1zp2A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.56 | 38.0 | 3.73e-01 | 83.3% | 64.3% |
| 2be4A03 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.54 | 42.0 | 4.49e-01 | 100.0% | 100.0% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.54 | 35.0 | 3.63e-01 | 76.5% | 70.2% |
| 2wvnA01 | 1.20.120.1020 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Prion-inhibition and propagation, HeLo domain | 0.53 | 37.0 | 2.94e-01 | 71.6% | 86.4% |
| 4c5fA02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.53 | 41.0 | 3.48e-01 | 82.4% | 92.9% |
| 2vlaA01 | 1.10.10.2080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.52 | 33.0 | 3.60e-01 | 99.0% | 82.1% |
| 1q8cA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.51 | 40.0 | 3.72e-01 | 83.3% | 89.4% |
| 8e9gE01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.51 | 27.0 | 3.32e-01 | 74.5% | 82.5% |
| 1wfxA01 | 1.10.10.970 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA 2'-phosphotransferase, Tpt1/KptA family, N-terminal domain | 0.51 | 34.0 | 3.90e-01 | 88.2% | 100.0% |
| 2janA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.51 | 38.0 | 3.84e-01 | 79.4% | 90.1% |
| 1eyvB00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.50 | 39.0 | 3.60e-01 | 83.3% | 88.7% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4948968 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.61 | 30.0 | 3.28e-01 | 98.0% | 54.1% |
| 3449471 | 109.4.1.791 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_17 | 0.54 | 32.0 | 2.91e-01 | 70.6% | 42.9% |
| None | — | 0.53 | 32.0 | 2.22e-01 | 70.6% | 17.4% | |
| None | — | 0.53 | 32.0 | 2.25e-01 | 70.6% | 18.2% | |
| 3679129 | 109.4.1.1454 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_17 | 0.53 | 32.0 | 2.69e-01 | 70.6% | 34.3% |
| None | — | 0.53 | 32.0 | 2.22e-01 | 70.6% | 17.4% | |
| None | — | 0.53 | 32.0 | 2.23e-01 | 70.6% | 17.4% | |
| 3350921 | 109.4.1.1879 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_11, TPR_12 | 0.53 | 32.0 | 2.66e-01 | 70.6% | 33.3% |
| None | — | 0.53 | 32.0 | 2.22e-01 | 70.6% | 17.1% | |
| None | — | 0.53 | 32.0 | 2.18e-01 | 70.6% | 16.0% | |
| 3673339 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 31.0 | 2.84e-01 | 95.1% | 43.0% |
| 3471354 | 108.1.1.29 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 | 0.53 | 42.0 | 4.41e-01 | 87.3% | 94.7% |
| None | — | 0.52 | 32.0 | 2.20e-01 | 72.5% | 17.2% |