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IMGVR_UViG_3300038318_000399-3300038318-Ga0134855_001111_26362_26709
Arc-VirIMGVR_UViG_3300038318_000399-3300038318-Ga0134855_001111_26362_26709
Identity
- Kingdom:
- archaea
Quality
78.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-114
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8t5tA01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.64 | 37.0 | 3.09e-01 | 89.9% | 33.5% |
| 1xdnA02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.61 | 46.0 | 4.08e-01 | 78.9% | 91.0% |
| 5ajiB02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 26.0 | 3.62e-01 | 83.5% | 82.0% |
| 5kiqA02 | 3.10.20.890 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 34.0 | 4.01e-01 | 91.7% | 90.3% |
| 2vh2A02 | 3.40.50.11690 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cell division protein FtsQ/DivIB | 0.56 | 40.0 | 3.82e-01 | 76.1% | 77.1% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.54 | 38.0 | 3.20e-01 | 71.6% | 94.1% |
| 1tf1B00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.52 | 40.0 | 3.41e-01 | 80.7% | 63.5% |
| 2dx0B01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.52 | 24.0 | 2.83e-01 | 100.0% | 58.7% |
| 2derA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.50 | 35.0 | 3.92e-01 | 99.1% | 90.8% |
| 4i8oA01 | 3.30.310.240 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Bacterial toxin RNase RnlA/LsoA, N-terminal domain | 0.50 | 33.0 | 3.54e-01 | 100.0% | 80.9% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3279119 | 4090.1.1.0 ↗ | a+b two layers › BH3703-like › BH3703-like › BH3703-like | 0.65 | 51.0 | 4.76e-01 | 83.5% | 94.1% |
| 3169010 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.62 | 46.0 | 3.16e-01 | 77.1% | 51.8% |
| 3709300 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.61 | 43.0 | 2.60e-01 | 72.5% | 18.6% |
| 3390746 | 5.1.3.19 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira | 0.60 | 46.0 | 3.84e-01 | 80.7% | 99.5% |
| 3927439 | 5.1.3.19 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira | 0.58 | 43.0 | 3.72e-01 | 78.0% | 75.4% |
| 3704808 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 41.0 | 2.76e-01 | 76.1% | 30.8% |
| 3595436 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.57 | 36.0 | 3.44e-01 | 78.0% | 51.9% |
| 3351103 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.55 | 40.0 | 3.80e-01 | 99.1% | 62.2% |
| 3990293 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.55 | 29.0 | 3.83e-01 | 81.7% | 100.0% |
| 5053864 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.55 | 41.0 | 3.50e-01 | 78.9% | 78.9% |
| 3374197 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 41.0 | 2.43e-01 | 80.7% | 32.1% |
| 4376478 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 29.0 | 3.16e-01 | 76.1% | 64.4% |
| 5023339 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.51 | 30.0 | 3.57e-01 | 94.5% | 88.6% |
| 3334482 | 9.23.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 › PAP_fibrillin | 0.50 | 39.0 | 3.38e-01 | 83.5% | 84.0% |
| 4994891 | 268.1.1.1 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 | 0.50 | 30.0 | 3.01e-01 | 82.6% | 57.3% |
| 3743052 | 5.1.4.78 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TFIIIC_delta | 0.50 | 41.0 | 2.79e-01 | 91.7% | 29.6% |