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IMGVR_UViG_3300038318_000444-3300038318-Ga0134855_006028_4409_4921
Arc-VirIMGVR_UViG_3300038318_000444-3300038318-Ga0134855_006028_4409_4921
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-156
Domain cluster:
rep: NC_049949.1__YP_009909686.1__H3V31_gp49__00049__D11-175
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF22398.2 best | DUF6978 | 36.0 | 1.10e-08 | 98.5% | 96.2% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.64 | 45.0 | 4.54e-01 | 81.6% | 71.2% |
| 2v1lA00 | 3.10.450.430 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF2787 | 0.59 | 43.0 | 4.49e-01 | 88.2% | 80.6% |
| 1p32B00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.58 | 44.0 | 4.03e-01 | 87.5% | 61.4% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 24.0 | 3.12e-01 | 97.8% | 69.4% |
| 2g18I00 | 3.40.1500.20 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › | 0.56 | 47.0 | 3.92e-01 | 91.2% | 79.8% |
| 2vckA00 | 3.40.1500.20 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › | 0.54 | 46.0 | 4.00e-01 | 91.2% | 82.7% |
| 3v98A03 | 3.10.450.60 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 35.0 | 3.84e-01 | 82.4% | 78.4% |
| 1jofA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 44.0 | 3.33e-01 | 92.6% | 87.1% |
| 1av4A03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.53 | 46.0 | 3.30e-01 | 96.3% | 65.1% |
| 1ksiA03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.53 | 45.0 | 3.29e-01 | 96.3% | 68.5% |
| 1a2vA03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.53 | 46.0 | 3.29e-01 | 97.8% | 65.1% |
| 4ghbA00 | 2.40.160.190 | Mainly Beta › Beta Barrel › Porin › | 0.52 | 44.0 | 3.58e-01 | 91.2% | 51.4% |
| 1c8zA00 | 3.20.90.10 | Alpha Beta › Alpha-Beta Barrel › Tubby Protein; Chain A › Tubby Protein; Chain A | 0.52 | 46.0 | 3.75e-01 | 98.5% | 92.5% |
| 6p2kB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 43.0 | 3.22e-01 | 92.6% | 91.1% |
| 3pgbA01 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.51 | 43.0 | 3.00e-01 | 93.4% | 60.3% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3581297 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.60 | 41.0 | 3.51e-01 | 80.9% | 43.7% |
| 3261416 | 897.1.1.0 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 | 0.57 | 43.0 | 4.33e-01 | 89.7% | 77.1% |
| 3645939 | 5084.5.1.33 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › DNAJC11_beta-barrel | 0.57 | 40.0 | 3.32e-01 | 81.6% | 39.6% |
| 3818341 | 331.9.1.4 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Coatomer_g_Cpla | 0.56 | 32.0 | 4.04e-01 | 90.4% | 96.2% |
| 312112 | 867.1.1.2 ↗ | a+b three layers › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Fe_bilin_red | 0.56 | 46.0 | 3.86e-01 | 90.4% | 77.0% |
| 4569248 | 5084.5.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › MDM10 | 0.56 | 41.0 | 3.04e-01 | 77.2% | 35.8% |
| 3700971 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.55 | 44.0 | 3.82e-01 | 85.3% | 94.8% |
| 4873102 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.55 | 44.0 | 4.54e-01 | 94.9% | 90.0% |
| 5035253 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.54 | 45.0 | 3.61e-01 | 90.4% | 96.4% |
| 3579354 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.53 | 32.0 | 3.52e-01 | 91.2% | 72.7% |
| 3393242 | 5.1.4.39 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC4_WD40 | 0.53 | 44.0 | 3.27e-01 | 93.4% | 90.1% |
| 4032561 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.53 | 46.0 | 3.91e-01 | 97.8% | 96.5% |
| 4523830 | 243.1.1.12 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 | 0.52 | 35.0 | 3.87e-01 | 80.1% | 84.5% |
| 3438881 | 867.1.1.2 ↗ | a+b three layers › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Coproporphyrinogen III oxidase › Fe_bilin_red | 0.52 | 44.0 | 3.50e-01 | 92.6% | 56.6% |
| 3917583 | 5.1.4.13 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP | 0.52 | 41.0 | 2.98e-01 | 85.3% | 75.1% |
| 5039380 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 44.0 | 3.33e-01 | 93.4% | 84.1% |
| 2526900 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.51 | 42.0 | 2.90e-01 | 92.6% | 83.5% |
| 3328359 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.50 | 45.0 | 3.99e-01 | 98.5% | 95.4% |