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IMGVR_UViG_3300038360_000583-3300038360-Ga0427896_007951_2596_3039

Arc-Vir

IMGVR_UViG_3300038360_000583-3300038360-Ga0427896_007951_2596_3039

Quality

89.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 49-145
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03477.22 best ATP-cone 76.7 2.30e-21 90.7% 96.6%
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1c3cA03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.73 46.0 5.02e-01 84.5% 76.5%
2ffjA01 1.10.8.380 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 0.72 42.0 5.23e-01 81.4% 100.0%
1dcnA03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.72 45.0 5.08e-01 75.3% 84.7%
2g8lB01 1.10.8.380 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 0.69 47.0 5.36e-01 78.4% 100.0%
2px0A01 1.20.120.1380 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar FlhF biosynthesis protein, N domain 0.69 49.0 5.50e-01 73.2% 100.0%
2mqaA00 1.10.274.60 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain 0.68 53.0 4.90e-01 84.5% 80.0%
3a06B03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.67 47.0 4.95e-01 74.2% 80.7%
3h0dB02 1.10.1200.150 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Transcriptional repressor of class III stress genes, C-terminal domain 0.67 43.0 4.62e-01 72.2% 77.8%
1lp1A00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.67 36.0 4.52e-01 76.3% 92.7%
2y1eA03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.66 46.0 4.85e-01 72.2% 80.5%
2ivxB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.66 59.0 5.27e-01 100.0% 76.4%
5jazA03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.65 46.0 4.78e-01 73.2% 80.2%
1td6A03 1.10.472.40 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Hypothetical protein mg237 homolog; domain 3 0.65 42.0 4.29e-01 74.2% 68.5%
1c9bA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.64 50.0 5.04e-01 87.6% 82.5%
1zp2A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.64 53.0 5.07e-01 89.7% 77.7%
3vkgA09 1.20.920.30 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › 0.64 57.0 4.93e-01 95.9% 79.2%
5xs2B02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.63 57.0 5.16e-01 100.0% 82.6%
3cxbA03 1.10.1740.30 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain 0.63 43.0 4.63e-01 73.2% 84.0%
2dzlA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.62 34.0 3.91e-01 74.2% 75.8%
3dfzA02 1.10.8.610 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › SirC, precorrin-2 dehydrogenase, C-terminal helical domain-like 0.60 35.0 3.92e-01 78.4% 74.3%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.60 50.0 4.93e-01 89.7% 98.1%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.60 53.0 4.71e-01 97.9% 91.5%
2hpsA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.60 52.0 4.30e-01 99.0% 76.6%
3tahA02 1.10.287.1770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.59 34.0 3.61e-01 75.3% 61.4%
2lrmA00 1.10.890.30 Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › YmgD protein 0.59 40.0 4.27e-01 71.1% 100.0%
4nftC00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.59 44.0 3.62e-01 79.4% 89.9%
1v1gA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.59 47.0 3.76e-01 87.6% 44.1%
2cr7A01 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.59 37.0 4.33e-01 71.1% 98.4%
2iw3A02 1.20.1390.20 Mainly Alpha › Up-down Bundle › PWI domain › 0.58 42.0 4.41e-01 78.4% 85.6%
1tj7A01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.57 43.0 4.20e-01 80.4% 84.8%
3juiA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.57 39.0 3.26e-01 70.1% 69.0%
3djbA01 1.10.472.50 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like 0.56 49.0 4.96e-01 97.9% 99.0%
1vt0k00 1.10.3230.20 Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › P22 tail accessory factor (Gp4) 0.55 40.0 3.55e-01 76.3% 67.6%
1jfiB00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.54 37.0 3.32e-01 70.1% 62.2%
1aisB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.53 47.0 4.71e-01 100.0% 100.0%
1xrhD01 1.10.1530.10 Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel 0.52 42.0 4.17e-01 87.6% 100.0%
4fcgA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.52 43.0 3.13e-01 92.8% 56.4%
ECOD (77)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4238441 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 1.00 81.0 8.97e-01 82.5% 100.0%
4160317 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.99 97.0 8.96e-01 100.0% 84.3%
4626373 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.97 94.0 9.09e-01 100.0% 92.4%
4466734 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.96 93.0 8.68e-01 100.0% 84.3%
4588018 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.96 88.0 8.98e-01 94.8% 96.8%
4388542 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.94 89.0 8.87e-01 99.0% 96.0%
4479880 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.94 90.0 8.77e-01 100.0% 92.4%
4954173 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.94 69.0 7.91e-01 84.5% 98.7%
4941277 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.91 70.0 7.70e-01 82.5% 96.2%
4948420 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.91 69.0 7.61e-01 87.6% 95.0%
4942297 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.91 63.0 7.36e-01 79.4% 98.6%
4957090 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.90 77.0 7.81e-01 88.7% 95.8%
4989754 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.90 70.0 7.71e-01 88.7% 97.5%
4952141 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.90 68.0 7.51e-01 87.6% 95.0%
5057092 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.90 62.0 7.26e-01 79.4% 98.6%
4948813 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.89 69.0 7.63e-01 89.7% 97.5%
4961006 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.89 66.0 7.45e-01 84.5% 98.7%
4895331 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.88 68.0 7.05e-01 79.4% 91.1%
5058165 103.2.1.0 alpha arrays › RuvA-C › ATP cone › ATP cone 0.88 71.0 7.55e-01 88.7% 95.3%
5066162 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.88 74.0 7.32e-01 87.6% 89.0%
3989376 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.88 79.0 7.72e-01 94.8% 99.0%
4946727 103.2.1.0 alpha arrays › RuvA-C › ATP cone › ATP cone 0.88 68.0 7.41e-01 84.5% 97.5%
1878970 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.87 75.0 7.33e-01 89.7% 93.2%
2141738 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.87 74.0 7.40e-01 89.7% 94.9%
4987113 103.2.1.0 alpha arrays › RuvA-C › ATP cone › ATP cone 0.87 64.0 7.26e-01 86.6% 100.0%
4993731 103.2.1.0 alpha arrays › RuvA-C › ATP cone › ATP cone 0.86 73.0 7.11e-01 88.7% 86.7%
4994194 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.86 63.0 7.05e-01 83.5% 97.3%
4507907 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.86 69.0 7.40e-01 87.6% 96.5%
5042563 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.86 68.0 7.27e-01 87.6% 95.3%
4056578 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.85 80.0 7.61e-01 100.0% 88.2%
4934727 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.85 72.0 7.30e-01 88.7% 95.8%
4943010 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.85 71.0 7.54e-01 86.6% 100.0%
3278241 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.85 79.0 7.53e-01 100.0% 88.2%
4945368 181.1.1.0 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins 0.84 66.0 7.23e-01 87.6% 100.0%
5034061 148.1.3.400 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Ribonuc_red_lgN 0.84 71.0 5.57e-01 89.7% 48.9%
5051773 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.84 71.0 7.34e-01 89.7% 95.6%
3594048 103.2.1.0 alpha arrays › RuvA-C › ATP cone › ATP cone 0.84 71.0 7.34e-01 88.7% 98.9%
2791177 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.84 71.0 6.87e-01 88.7% 82.1%
3486229 103.2.1.0 alpha arrays › RuvA-C › ATP cone › ATP cone 0.83 70.0 7.25e-01 88.7% 97.8%
5057106 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.83 70.0 7.22e-01 88.7% 97.8%
3597638 103.2.1.0 alpha arrays › RuvA-C › ATP cone › ATP cone 0.82 65.0 7.07e-01 84.5% 100.0%
5037352 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.82 61.0 6.87e-01 79.4% 100.0%
3784313 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.82 69.0 7.13e-01 88.7% 96.7%
4975484 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.82 69.0 4.75e-01 89.7% 99.3%
4932763 103.2.1.0 alpha arrays › RuvA-C › ATP cone › ATP cone 0.81 62.0 6.76e-01 85.6% 97.5%
4954174 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.81 64.0 6.67e-01 92.8% 90.0%
2320584 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.81 68.0 6.86e-01 89.7% 92.8%
4307412 181.1.1.27 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › ATP-cone 0.81 65.0 6.93e-01 87.6% 97.6%
3455739 181.1.1.0 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins 0.80 65.0 6.75e-01 86.6% 92.2%
3427839 103.2.1.0 alpha arrays › RuvA-C › ATP cone › ATP cone 0.80 65.0 6.90e-01 86.6% 97.6%
4987957 103.2.1.0 alpha arrays › RuvA-C › ATP cone › ATP cone 0.80 59.0 6.59e-01 86.6% 100.0%
5044307 103.2.1.0 alpha arrays › RuvA-C › ATP cone › ATP cone 0.80 58.0 6.13e-01 77.3% 85.9%
5004355 103.2.1.0 alpha arrays › RuvA-C › ATP cone › ATP cone 0.79 66.0 6.82e-01 87.6% 100.0%
4996564 103.2.1.0 alpha arrays › RuvA-C › ATP cone › ATP cone 0.79 64.0 6.77e-01 88.7% 97.6%
4980139 103.2.1.0 alpha arrays › RuvA-C › ATP cone › ATP cone 0.79 66.0 6.59e-01 88.7% 96.0%
1878968 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.79 66.0 6.58e-01 88.7% 87.0%
5070580 181.1.1.0 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins 0.79 47.0 5.83e-01 73.2% 98.3%
5051504 103.2.1.0 alpha arrays › RuvA-C › ATP cone › ATP cone 0.78 56.0 6.29e-01 77.3% 97.3%
5043182 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.76 67.0 6.64e-01 93.8% 98.0%
4988064 4009.1.1.1 alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom 0.75 52.0 5.96e-01 79.4% 98.6%
4953264 103.2.1.2 alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone 0.74 59.0 6.25e-01 85.6% 98.8%
4939372 4009.1.1.0 alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins 0.73 51.0 5.79e-01 79.4% 98.6%
5077807 4009.1.1.0 alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins 0.72 50.0 5.78e-01 78.4% 100.0%
4986727 103.2.1.0 alpha arrays › RuvA-C › ATP cone › ATP cone 0.72 56.0 5.78e-01 84.5% 88.9%
5025644 148.1.3.20 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 0.71 52.0 5.64e-01 76.3% 95.0%
3287733 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.69 49.0 5.40e-01 76.3% 97.3%
4258320 142.1.1.3 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.68 47.0 5.14e-01 74.2% 86.3%
3651184 4957.1.1.7 a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit › MOM1 0.66 48.0 5.34e-01 84.5% 100.0%
3700903 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.66 52.0 4.77e-01 90.7% 64.8%
4030224 3871.1.1.1 alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN 0.66 46.0 4.21e-01 74.2% 83.0%
3807825 6067.1.1.0 alpha arrays › Dimerization domain of Sgt2 › Dimerization domain of Sgt2 › Dimerization domain of Sgt2 0.60 53.0 3.86e-01 100.0% 47.6%
1429455 4275.1.1.4 alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › P22_Tail-4 0.59 42.0 3.73e-01 75.3% 67.1%
4976921 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.56 40.0 2.78e-01 74.2% 53.7%
3230949 103.4.1.1 alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › KIX 0.54 36.0 4.00e-01 73.2% 90.7%
4595180 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.54 33.0 3.49e-01 72.2% 69.4%
3556006 5001.1.1.10 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Ceramidase 0.52 41.0 3.13e-01 88.7% 65.0%
3884902 5001.1.1.10 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Ceramidase 0.52 43.0 3.24e-01 93.8% 91.5%