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IMGVR_UViG_3300038365_000136-3300038365-Ga0134850_000682_20746_21051
Arc-VirIMGVR_UViG_3300038365_000136-3300038365-Ga0134850_000682_20746_21051
Identity
- Kingdom:
- archaea
Quality
70.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 14-45
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vl6A03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.64 | 49.0 | 4.47e-01 | 87.5% | 79.2% |
| 4iloA00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 43.0 | 2.71e-01 | 87.5% | 14.8% |
| 4xxbB00 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.59 | 41.0 | 3.94e-01 | 90.6% | 61.9% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5034817 | 375.2.1.0 ↗ | few secondary structure elements › Rubredoxin-like › YfgJ-like › YfgJ-like | 0.61 | 42.0 | 4.32e-01 | 90.6% | 100.0% |
| 3806101 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.59 | 41.0 | 3.73e-01 | 93.8% | 58.3% |
| 3399739 | 375.1.1.187 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zf_2nd_IFT121 | 0.58 | 43.0 | 4.36e-01 | 87.5% | 96.7% |
| 3512726 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.57 | 39.0 | 3.60e-01 | 96.9% | 50.9% |
| 3535412 | 377.10.1.3 ↗ | few secondary structure elements › Glucocorticoid receptor-like › A20-like zinc finger › A20-like zinc finger › zf-AN1 | 0.56 | 39.0 | 3.69e-01 | 93.8% | 84.0% |
| 3476530 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.54 | 39.0 | 3.38e-01 | 90.6% | 52.3% |
| 3366699 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.54 | 39.0 | 3.19e-01 | 90.6% | 38.8% |
D2
medium
residues 55-99
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 39.0 | 3.28e-01 | 100.0% | 48.6% |